Detailed information NTG1033906

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: DXE36_RS03260
• Genome accession: NZ_LT992469
• Coordinates: 579142..580416 (-)
• Length: 424 a.a.
• NCBI ID: WP_000102740.1
• Uniprot ID: -
• Organism: Staphylococcus aureus isolate 15_LA_305
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 574142..585416

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DXE36_RS03235	hisS	574703..575965 (+)	1263	WP_000590826.1	histidine--tRNA ligase	-
DXE36_RS03240	aspS	575981..577747 (+)	1767	WP_000044794.1	aspartate--tRNA ligase	-
DXE36_RS03250	-	578080..578208 (+)	129	WP_014937034.1	hypothetical protein	-
DXE36_RS03255	-	578208..578981 (+)	774	WP_000682648.1	tRNA threonylcarbamoyladenosine dehydratase	-
DXE36_RS03260	rarA	579142..580416 (-)	1275	WP_000102740.1	replication-associated recombination protein A	Machinery gene
DXE36_RS03265	cymR	580501..580923 (+)	423	WP_000704122.1	cysteine metabolism transcriptional regulator CymR	-
DXE36_RS03270	-	581023..581205 (+)	183	WP_000752909.1	CsbD family protein	-
DXE36_RS03275	-	581245..581391 (+)	147	WP_000009235.1	SAS049 family protein	-
DXE36_RS03280	-	581628..582641 (-)	1014	WP_000985891.1	LLM class flavin-dependent oxidoreductase	-
DXE36_RS03285	-	582952..584094 (+)	1143	WP_000409167.1	cysteine desulfurase family protein	-
DXE36_RS03290	mnmA	584095..585213 (+)	1119	WP_000066097.1	tRNA 2-thiouridine(34) synthase MnmA	-

Sequence

Protein

• Length: 424 a.a.
• Molecular weight: 47264.84 Da
• Isoelectric Point: 8.3539

>NTDB_id=1033906 DXE36_RS03260 WP_000102740.1 579142..580416(-) (rarA) [Staphylococcus aureus isolate 15_LA_305]
MSTEPLASRMRPKNIDEIISQQHLVGPRGIIRRMVDTKKLTSMIFYGPPGIGKTSIAKAISGSTQYKFRQLNAVTNTKKD
MQLVVEEAKMSGQVILLLDEIHRLDKAKQDFLLPHLENGKIVLIGATTSNPYHAINPAIRSRAQIFELYPLNDEDVRQAL
TRAIEDEENGLKTYQPKIDEDAMTYFSTQSQGDVRSALNALELAVLSADNDKDGYRHVTLQDAKDCLQKGAFVSDKDGDM
HYDVMSAFQKSIRGSDVNAALHYLARLIEAGDLPTIVRRLLVISYEDIGLASPNAGQRTLAAIESAERLGLPEARIPLSQ
AVIELCLSPKSNSAMSAIDSALSDIRNGHVGQIPNHLKDGHYQGAKDLGRSIGYKYPHQYVNGYVSQQYLPDKLKNKIYY
EPKTTSKSEQQLKEIYNNLLKQRP

Nucleotide

• Length: 1275 bp

>NTDB_id=1033906 DXE36_RS03260 WP_000102740.1 579142..580416(-) (rarA) [Staphylococcus aureus isolate 15_LA_305]
GTGAGTACAGAACCATTAGCGTCGAGAATGCGCCCAAAAAATATAGATGAAATCATTTCCCAACAACACTTAGTTGGACC
AAGAGGCATTATCAGAAGAATGGTTGACACAAAAAAATTAACTTCAATGATTTTTTATGGTCCACCTGGTATAGGCAAAA
CAAGTATTGCCAAAGCAATTTCGGGCAGTACACAATATAAATTTAGACAATTGAATGCTGTAACTAACACTAAAAAAGAT
ATGCAACTTGTTGTTGAAGAAGCTAAAATGTCTGGTCAAGTTATCTTGTTATTAGATGAAATCCATCGACTAGATAAAGC
CAAACAAGATTTTTTATTACCTCATTTAGAAAATGGCAAAATCGTCTTAATCGGTGCTACAACTTCAAATCCTTATCATG
CTATCAATCCAGCGATTCGTTCAAGAGCGCAAATTTTCGAGTTATATCCTTTAAATGACGAAGATGTTCGCCAAGCGTTA
ACTCGTGCAATAGAAGATGAAGAGAATGGTTTGAAAACATATCAACCCAAAATTGATGAAGATGCTATGACCTACTTTTC
TACACAAAGTCAAGGTGATGTTCGTAGTGCGCTAAATGCATTGGAATTAGCTGTATTAAGCGCAGATAATGACAAGGACG
GTTATCGACATGTTACATTGCAAGATGCTAAAGACTGCTTACAAAAAGGTGCATTTGTAAGTGATAAGGATGGTGACATG
CATTACGATGTTATGAGCGCTTTCCAAAAATCTATCCGTGGTAGCGACGTCAATGCCGCTTTACATTATTTAGCACGATT
AATTGAAGCTGGAGATTTACCTACAATAGTTCGACGATTACTTGTAATTAGCTATGAGGATATAGGCTTAGCCTCACCTA
ATGCTGGTCAGAGAACACTTGCTGCTATTGAATCAGCAGAACGTCTAGGTTTACCAGAAGCTAGAATCCCACTAAGCCAA
GCAGTAATCGAACTATGCTTATCACCTAAGTCAAATTCAGCAATGAGTGCCATTGATAGTGCATTGTCCGATATTAGAAA
CGGTCATGTGGGCCAAATTCCAAACCATTTAAAAGATGGACATTATCAAGGTGCTAAAGATCTAGGCCGATCTATTGGTT
ACAAATATCCACACCAATATGTTAATGGCTATGTTTCACAGCAATATTTACCTGATAAACTTAAAAACAAAATTTATTAT
GAACCAAAAACGACATCTAAAAGTGAACAACAACTCAAAGAAATATATAACAATTTACTTAAACAAAGGCCATAA

Domains

Predicted by InterProScan.

• MgsA AAA+ ATPase C terminal (MgsA_C) (254-418)

• ATPase family associated with various cellular activities (AAA) (AAA) (43-145)

• AAA C-terminal domain (AAA_assoc_2) (175-253)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	69.286	99.057	0.686