Detailed information NTG1033213

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: AB8O67_RS14725
• Genome accession: NZ_CP166053
• Coordinates: 2790336..2792732 (-)
• Length: 798 a.a.
• NCBI ID: WP_369888247.1
• Uniprot ID: -
• Organism: Bacillus halotolerans strain XYK2-4
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2785336..2797732

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB8O67_RS14690 (AB8O67_14690)	-	2786405..2787133 (+)	729	WP_199398321.1	amino acid ABC transporter ATP-binding protein	-
AB8O67_RS14695 (AB8O67_14695)	-	2787156..2787977 (+)	822	WP_369888246.1	transporter substrate-binding domain-containing protein	-
AB8O67_RS14700 (AB8O67_14700)	-	2788041..2788691 (+)	651	WP_044154313.1	amino acid ABC transporter permease	-
AB8O67_RS14705 (AB8O67_14705)	-	2788708..2789364 (+)	657	WP_095714638.1	amino acid ABC transporter permease	-
AB8O67_RS14710 (AB8O67_14710)	-	2789398..2789529 (-)	132	WP_024122308.1	YrzQ family protein	-
AB8O67_RS14715 (AB8O67_14715)	-	2789551..2789742 (-)	192	WP_010335110.1	hypothetical protein	-
AB8O67_RS14720 (AB8O67_14720)	-	2789754..2790218 (-)	465	WP_044154311.1	hypothetical protein	-
AB8O67_RS14725 (AB8O67_14725)	recD2	2790336..2792732 (-)	2397	WP_369888247.1	ATP-dependent RecD-like DNA helicase	Machinery gene
AB8O67_RS14730 (AB8O67_14730)	-	2792757..2793377 (-)	621	WP_083510067.1	tetratricopeptide repeat protein	-
AB8O67_RS14735 (AB8O67_14735)	mnmA	2793461..2794576 (-)	1116	WP_004398509.1	tRNA 2-thiouridine(34) synthase MnmA	-
AB8O67_RS14740 (AB8O67_14740)	-	2794605..2795747 (-)	1143	WP_369888248.1	cysteine desulfurase family protein	-
AB8O67_RS14745 (AB8O67_14745)	cymR	2795767..2796183 (-)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
AB8O67_RS14750 (AB8O67_14750)	-	2796385..2797650 (+)	1266	WP_059335505.1	replication-associated recombination protein A	-

Sequence

Protein

• Length: 798 a.a.
• Molecular weight: 88994.64 Da
• Isoelectric Point: 5.0679

>NTDB_id=1033213 AB8O67_RS14725 WP_369888247.1 2790336..2792732(-) (recD2) [Bacillus halotolerans strain XYK2-4]
MQQHPDQLKMEEEPFLKGTVNTVIYHNDANLYTVLKVKVTETSEAIEDKVVSVTGYFPALQEEETYTFYGKTVTHPKFGL
QFQAEHFKKEIPTTKEGVIQYLSSDLFEGIGKKTAEEIVKKLGDSAINKILADSSVLYDVPRLSKKKADTLAGALQRHQG
LEQIMISLNQFGFGPQLSMKIYQAYESETLEKIQENPYQLVRDVEGIGFGKADELGGRMGLSGNHPERIKAAILYTLETT
CLSEGHTYIETKQLIIETQTLLNQSAADGQRITEMDAANAMIALGENKDIVIEDERCYFPSLFFAEQNVAKRVKQIASQT
EYDDQFPESEFLLVLGELEERMNVQYAPSQKEAIQKALSSPMLLLTGGPGTGKTTVIRGIVELYGELHGASLDPSDYKKD
EAFPIVLAAPTGRAAKRMSESTGLPAVTIHRLLGWNGAEGFTHTEDQPIEGKLLIIDEASMLDIWLANHLFKAIPDHIQI
IIVGDEDQLPSVGPGQVLRDLLASQVIPTVRLTDIYRQAEGSSIVELAHEMKNGLLPNNLTAPTKDRSFIRCGGSQIKEV
VEKVVANALKKGYTAKDIQVLAPMYRGKAGINELNVMLQDILNPPKEKRREIKFGDVVYRTGDKILQLVNQPENNVFNGD
IGEITSIFYAKENTEKEDMAVVSFDGNEMTFTKKDFSQFTHAYCCSIHKSQGSEFPIVVLPVVKGYYRMLRRNLLYTAIT
RAKKFLILCGEEEALEWGVKNNDATVRQTSLKNRLSAQAAEMDAELAALQKELPFSVHDANIGMKGITPFDFMKEEQL

Nucleotide

• Length: 2397 bp

>NTDB_id=1033213 AB8O67_RS14725 WP_369888247.1 2790336..2792732(-) (recD2) [Bacillus halotolerans strain XYK2-4]
GTGCAGCAGCACCCGGATCAGCTGAAAATGGAGGAGGAGCCCTTTTTAAAAGGGACAGTAAACACCGTCATTTATCACAA
TGACGCCAATTTATATACGGTTCTGAAAGTGAAAGTCACAGAGACCTCCGAAGCTATTGAAGATAAAGTCGTATCCGTGA
CGGGCTACTTCCCTGCGCTTCAAGAAGAAGAGACCTACACGTTTTACGGAAAAACCGTTACTCACCCAAAGTTCGGACTG
CAATTTCAAGCTGAGCATTTCAAAAAGGAGATCCCGACAACAAAAGAAGGCGTCATTCAGTATTTGTCGAGCGATCTGTT
TGAAGGAATCGGTAAAAAAACCGCTGAAGAGATTGTGAAAAAACTGGGTGACAGTGCGATTAATAAAATTTTGGCTGATT
CTTCAGTCCTTTATGATGTTCCGAGACTGTCAAAAAAGAAAGCTGACACCCTTGCCGGTGCTTTGCAGCGGCATCAGGGA
CTGGAGCAAATTATGATTTCGCTGAATCAATTTGGGTTCGGCCCTCAGCTGTCTATGAAAATCTATCAGGCCTATGAATC
CGAGACGCTGGAGAAAATTCAGGAAAACCCTTATCAGCTTGTGAGAGACGTGGAAGGCATAGGCTTTGGAAAAGCAGATG
AGCTTGGCGGAAGAATGGGGCTCTCAGGGAATCATCCTGAGCGGATAAAAGCGGCTATTTTGTACACGCTTGAAACGACA
TGCCTTTCAGAAGGGCATACGTACATAGAAACGAAGCAGCTGATTATCGAAACCCAAACGCTGTTAAATCAGTCAGCGGC
AGATGGACAGCGCATTACAGAAATGGATGCCGCTAATGCAATGATTGCGCTTGGAGAAAATAAGGATATTGTCATTGAAG
ATGAACGATGTTACTTTCCGTCGCTGTTTTTCGCTGAACAAAATGTTGCAAAGCGTGTGAAACAGATCGCAAGCCAAACC
GAATATGACGATCAGTTTCCTGAATCAGAATTCCTTCTGGTTTTAGGAGAATTGGAAGAGCGTATGAATGTTCAGTACGC
GCCGAGTCAGAAGGAAGCGATACAAAAAGCGCTGTCGTCACCGATGCTTCTTTTAACGGGAGGGCCGGGTACCGGTAAAA
CAACGGTCATCAGAGGCATTGTAGAATTGTATGGAGAACTCCACGGTGCTTCGCTTGATCCGTCGGATTATAAAAAAGAT
GAAGCCTTTCCGATTGTGCTGGCCGCGCCTACAGGTAGAGCGGCGAAACGAATGAGTGAGTCAACGGGTCTTCCGGCGGT
TACGATACACCGGCTGCTCGGCTGGAATGGCGCGGAAGGATTTACTCATACAGAGGACCAGCCGATTGAAGGGAAGCTTT
TAATTATCGATGAAGCGAGTATGCTTGATATATGGCTTGCGAATCATTTGTTCAAAGCGATCCCTGACCATATTCAAATC
ATCATTGTCGGAGACGAAGACCAGCTGCCTTCCGTCGGACCCGGTCAAGTGCTCAGAGACCTTTTGGCATCCCAGGTGAT
TCCGACCGTAAGACTGACCGACATCTACCGGCAAGCGGAAGGATCGTCGATTGTCGAGCTTGCCCACGAGATGAAAAATG
GGCTGCTTCCAAACAACCTGACGGCCCCGACAAAGGATCGTTCCTTTATTCGCTGCGGTGGTTCGCAAATTAAAGAAGTG
GTTGAGAAGGTTGTCGCGAATGCATTGAAAAAAGGATATACGGCAAAAGATATACAGGTCCTCGCCCCAATGTACAGAGG
GAAAGCCGGAATCAATGAGCTGAATGTGATGCTGCAGGATATTTTAAACCCTCCAAAAGAAAAGCGGAGGGAAATTAAGT
TCGGTGACGTTGTCTATAGAACCGGGGATAAAATTTTGCAGCTTGTCAATCAGCCGGAAAACAATGTGTTTAACGGCGAT
ATTGGAGAAATCACTTCAATTTTCTATGCGAAGGAAAATACAGAAAAAGAAGACATGGCTGTTGTCTCTTTTGACGGCAA
TGAAATGACATTTACGAAAAAAGACTTCAGTCAGTTTACTCATGCGTATTGCTGCTCTATTCATAAATCGCAGGGCAGTG
AATTTCCGATCGTGGTTCTTCCTGTAGTGAAGGGCTACTATAGAATGCTCAGAAGAAACCTTCTATATACCGCCATCACG
AGGGCGAAGAAATTTCTCATTTTATGCGGGGAAGAGGAAGCGCTGGAGTGGGGCGTGAAAAATAATGACGCGACTGTCAG
ACAGACCTCATTAAAAAACAGGCTGTCAGCGCAGGCGGCTGAAATGGATGCTGAGCTTGCGGCTTTGCAAAAAGAGCTCC
CGTTCAGCGTGCACGACGCAAATATCGGAATGAAAGGCATTACGCCATTCGATTTTATGAAAGAAGAACAGCTGTAA

Domains

Predicted by InterproScan.

• AAA domain (AAA_30) (346-553)

• Helix-hairpin-helix containing domain (HHH_RecD2) (158-248)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (594-662)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (681-729)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	95.859	99.875	0.957