Detailed information NTG1032798

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: AB8V76_RS01460
• Genome accession: NZ_CP165994
• Coordinates: 295080..297473 (-)
• Length: 797 a.a.
• NCBI ID: WP_185483098.1
• Uniprot ID: -
• Organism: Listeria ivanovii strain PNUSAL004272
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 290080..302473

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB8V76_RS01440 (AB8V76_01440)	-	290540..291235 (-)	696	WP_014092868.1	ABC transporter ATP-binding protein	-
AB8V76_RS01445 (AB8V76_01445)	-	291244..292752 (-)	1509	WP_014092869.1	ABC transporter permease	-
AB8V76_RS01450 (AB8V76_01450)	pieR	292919..293605 (+)	687	WP_014092870.1	two component system response regulator PieR	-
AB8V76_RS01455 (AB8V76_01455)	pieS	293602..295041 (+)	1440	WP_014092871.1	two component system sensor histidine kinase PieS	-
AB8V76_RS01460 (AB8V76_01460)	recD2	295080..297473 (-)	2394	WP_185483098.1	ATP-dependent RecD-like DNA helicase	Machinery gene
AB8V76_RS01465 (AB8V76_01465)	-	297499..298137 (-)	639	WP_014092873.1	tetratricopeptide repeat protein	-
AB8V76_RS01470 (AB8V76_01470)	-	298180..298920 (-)	741	WP_014092874.1	alpha/beta hydrolase	-
AB8V76_RS01475 (AB8V76_01475)	mnmA	299039..300154 (-)	1116	WP_014092875.1	tRNA 2-thiouridine(34) synthase MnmA	-
AB8V76_RS01480 (AB8V76_01480)	-	300173..301321 (-)	1149	WP_014092876.1	cysteine desulfurase family protein	-

Sequence

Protein

• Length: 797 a.a.
• Molecular weight: 90115.36 Da
• Isoelectric Point: 4.9786

>NTDB_id=1032798 AB8V76_RS01460 WP_185483098.1 295080..297473(-) (recD2) [Listeria ivanovii strain PNUSAL004272]
MAEQESLALFDTPEELFMKGTMLSTIFYNAENLFSVVRILVKETNADWDEKDIIVTGFFPALHEQEVYTFYGKMQEHAKF
GQQFKAERFRKEMPQSRAGLINYLSGELFKGIGKVTAENIVDTIGDDAITRILSDPSLLNNVPKLPSGAAESLLASLREN
QGLEHVMVGLNEYGFGPQLSMKIFQAYKQNAIEVLENNPYKLIEDVKGIGFHRADELGRKLGLGGNHPERLRAGILFMLD
SVCMQQGHVYMEQEALLAEVTFLIEESEGIRIDHAILMEQIEKLAEEQKIIMENTRVYMPSLYYSESGFAYHVKRMLKQT
QYQEQFPQSEFLLALGELEERIGVHYGDSQREALEQALMSPMLVLTGGPGTGKTTVIKGIVELYAELNGVSLDPHAYKDG
ATFPVLLAAPTGRAAKRMSESTGLPSMTIHRLLGMNGQEQMDDDAERLIDGRLLIVDEMSMVDIWLANQLFRALPSHMQV
VLVGDQDQLPSVGPGQVLKDILHSKQIPTVALSDIYRQKDGSSIIEMAHNIKEGMLPADFAKNSADRSFFHCTVNQIGDV
VEQVVKNAKNKGFRAKDIQVLAPMYRGPAGIDILNKKLQEIFNPNDTGRRKEVQFGELKYRIHDKVLQLINQPEKNVFNG
DIGEIVSIIYAKENTEKQDMIVVQFDQTEVSYYRQEFNQLTHAYCCSIHKAQGSEFPIVIMPIVRSYYRMLRRDLLYTGV
TRSKQFLILCGEEEAFRMGVERVDENKRNTTLSERLISEDVMLEQMTNKRILTIENITEIDPMIGMEGITPNQFMAG

Nucleotide

• Length: 2394 bp

>NTDB_id=1032798 AB8V76_RS01460 WP_185483098.1 295080..297473(-) (recD2) [Listeria ivanovii strain PNUSAL004272]
ATGGCTGAACAAGAATCTCTCGCTTTATTTGACACGCCAGAAGAGCTTTTTATGAAGGGCACGATGTTGTCCACCATTTT
TTATAATGCCGAAAACCTCTTTTCTGTTGTGCGAATTCTTGTCAAAGAAACCAATGCAGATTGGGATGAAAAAGATATTA
TTGTGACTGGTTTTTTCCCCGCTTTACATGAACAAGAAGTGTATACTTTTTATGGGAAAATGCAGGAACATGCCAAATTT
GGACAGCAATTTAAAGCAGAACGTTTTAGGAAAGAAATGCCGCAATCTCGTGCTGGTTTAATTAATTATCTGTCTGGTGA
GCTTTTTAAAGGTATTGGCAAAGTGACTGCGGAAAATATTGTTGATACAATTGGCGACGATGCAATTACGCGGATTTTAT
CTGATCCAAGTTTACTTAATAATGTTCCAAAGTTACCATCTGGTGCTGCGGAGAGCCTCCTTGCTTCTTTACGAGAAAAT
CAAGGCTTAGAGCATGTGATGGTCGGGCTAAATGAATATGGATTTGGTCCACAACTTTCGATGAAGATTTTTCAAGCATA
TAAACAAAATGCTATCGAAGTACTTGAAAACAATCCATACAAATTAATTGAGGATGTCAAAGGTATTGGATTTCACCGAG
CGGATGAGCTTGGTCGGAAATTAGGACTAGGAGGAAATCATCCTGAACGCCTTCGTGCGGGAATTTTATTTATGCTTGAT
TCTGTATGCATGCAACAAGGCCATGTTTATATGGAACAAGAAGCGCTACTTGCAGAAGTGACCTTTTTGATAGAAGAAAG
TGAAGGTATTCGAATTGATCATGCTATTTTAATGGAACAAATAGAAAAGCTTGCTGAAGAACAAAAAATTATCATGGAAA
ACACACGTGTCTATATGCCATCTTTATATTATTCGGAAAGCGGCTTTGCTTATCATGTAAAACGGATGCTGAAACAAACA
CAGTATCAAGAGCAATTTCCGCAGTCTGAGTTCTTGCTGGCACTTGGAGAGTTAGAAGAGCGAATTGGTGTTCATTACGG
AGATTCGCAGCGAGAGGCGTTAGAGCAAGCTTTAATGTCGCCGATGCTTGTACTTACTGGTGGACCAGGAACAGGGAAGA
CTACTGTTATTAAAGGTATTGTGGAATTATATGCCGAATTAAATGGTGTAAGTCTAGACCCGCATGCTTATAAAGATGGC
GCGACGTTTCCAGTTCTGTTAGCGGCACCAACTGGACGAGCAGCTAAGCGAATGTCTGAGTCAACAGGACTTCCATCAAT
GACCATTCACCGTTTACTCGGTATGAATGGGCAAGAGCAAATGGATGATGATGCAGAAAGATTAATTGATGGTCGGCTTT
TAATTGTAGATGAAATGTCGATGGTGGATATTTGGCTTGCTAACCAACTATTTCGTGCACTTCCTTCGCATATGCAAGTA
GTTTTAGTAGGAGACCAAGACCAATTGCCATCAGTTGGACCAGGACAGGTCTTGAAAGATATACTTCACTCGAAACAAAT
TCCAACCGTTGCGCTTTCAGATATTTATAGGCAAAAAGATGGATCTTCCATTATTGAGATGGCTCATAATATTAAAGAAG
GCATGTTGCCAGCTGATTTTGCGAAAAATAGTGCTGATCGTTCTTTCTTTCACTGTACCGTGAATCAAATTGGTGATGTC
GTTGAACAAGTCGTAAAAAATGCCAAAAATAAAGGTTTCCGCGCAAAAGATATTCAAGTTTTAGCACCGATGTATCGTGG
CCCGGCTGGAATCGATATTTTAAATAAAAAGCTACAAGAAATTTTTAATCCTAATGACACTGGCAGACGTAAAGAAGTGC
AATTTGGCGAATTAAAATATCGTATACATGATAAAGTTTTGCAGTTAATAAATCAACCGGAAAAAAATGTCTTTAACGGC
GATATCGGGGAAATAGTATCGATTATTTATGCGAAGGAAAACACCGAAAAGCAAGATATGATTGTTGTGCAATTTGATCA
AACCGAAGTATCCTATTACCGGCAAGAATTTAATCAATTGACGCATGCTTATTGTTGTTCTATTCATAAAGCACAAGGTA
GCGAGTTTCCCATTGTGATTATGCCAATTGTTCGTAGCTATTACCGAATGTTACGACGTGACTTGTTATATACGGGTGTC
ACTCGAAGCAAGCAATTTTTGATTCTTTGCGGTGAAGAAGAGGCGTTTCGAATGGGTGTTGAGCGTGTCGATGAAAACAA
ACGTAATACGACGCTTTCAGAACGTTTAATAAGTGAAGATGTTATGCTCGAACAAATGACCAATAAACGAATTTTAACTA
TCGAAAATATTACCGAAATAGATCCGATGATTGGGATGGAAGGAATAACCCCCAACCAATTTATGGCAGGCTAA

Domains

Predicted by InterproScan.

• Helix-hairpin-helix containing domain (HHH_RecD2) (159-250)

• AAA domain (AAA_30) (346-553)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (594-665)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (682-730)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	57.234	98.871	0.566