Detailed information NTG1032772

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: DYY96_RS03285
• Genome accession: NZ_LT992435
• Coordinates: 662221..663495 (+)
• Length: 424 a.a.
• NCBI ID: WP_000102740.1
• Uniprot ID: -
• Organism: Staphylococcus aureus isolate 1549-SCV
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 657221..668495

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DYY96_RS03255	mnmA	657423..658541 (-)	1119	WP_000066103.1	tRNA 2-thiouridine(34) synthase MnmA	-
DYY96_RS03260	-	658542..659684 (-)	1143	WP_000409162.1	cysteine desulfurase family protein	-
DYY96_RS03265	-	659996..661009 (+)	1014	WP_000985881.1	LLM class flavin-dependent oxidoreductase	-
DYY96_RS03270	-	661246..661392 (-)	147	WP_000009238.1	SAS049 family protein	-
DYY96_RS03275	-	661432..661614 (-)	183	WP_000752909.1	CsbD family protein	-
DYY96_RS03280	cymR	661714..662136 (-)	423	WP_000704122.1	cysteine metabolism transcriptional regulator CymR	-
DYY96_RS03285	rarA	662221..663495 (+)	1275	WP_000102740.1	replication-associated recombination protein A	Machinery gene
DYY96_RS03290	-	663656..664429 (-)	774	WP_000682645.1	tRNA threonylcarbamoyladenosine dehydratase	-
DYY96_RS03295	-	664429..664557 (-)	129	WP_001827648.1	hypothetical protein	-
DYY96_RS03305	aspS	664889..666655 (-)	1767	WP_000044803.1	aspartate--tRNA ligase	-
DYY96_RS03310	hisS	666671..667933 (-)	1263	WP_000590826.1	histidine--tRNA ligase	-

Sequence

Protein

• Length: 424 a.a.
• Molecular weight: 47264.84 Da
• Isoelectric Point: 8.3539

>NTDB_id=1032772 DYY96_RS03285 WP_000102740.1 662221..663495(+) (rarA) [Staphylococcus aureus isolate 1549-SCV]
MSTEPLASRMRPKNIDEIISQQHLVGPRGIIRRMVDTKKLTSMIFYGPPGIGKTSIAKAISGSTQYKFRQLNAVTNTKKD
MQLVVEEAKMSGQVILLLDEIHRLDKAKQDFLLPHLENGKIVLIGATTSNPYHAINPAIRSRAQIFELYPLNDEDVRQAL
TRAIEDEENGLKTYQPKIDEDAMTYFSTQSQGDVRSALNALELAVLSADNDKDGYRHVTLQDAKDCLQKGAFVSDKDGDM
HYDVMSAFQKSIRGSDVNAALHYLARLIEAGDLPTIVRRLLVISYEDIGLASPNAGQRTLAAIESAERLGLPEARIPLSQ
AVIELCLSPKSNSAMSAIDSALSDIRNGHVGQIPNHLKDGHYQGAKDLGRSIGYKYPHQYVNGYVSQQYLPDKLKNKIYY
EPKTTSKSEQQLKEIYNNLLKQRP

Nucleotide

• Length: 1275 bp

>NTDB_id=1032772 DYY96_RS03285 WP_000102740.1 662221..663495(+) (rarA) [Staphylococcus aureus isolate 1549-SCV]
GTGAGTACAGAACCATTAGCATCGAGAATGCGCCCAAAAAATATAGATGAAATCATTTCCCAACAACATTTAGTTGGACC
AAGAGGCATTATCAGAAGAATGGTTGACACAAAAAAATTAACTTCAATGATTTTTTATGGTCCACCTGGTATAGGCAAAA
CAAGTATAGCCAAAGCAATTTCGGGCAGTACGCAATATAAATTCAGACAATTGAATGCTGTAACTAACACTAAAAAAGAT
ATGCAACTTGTTGTTGAAGAAGCTAAAATGTCTGGTCAAGTTATCTTGTTATTAGATGAAATCCATCGACTAGATAAAGC
CAAACAAGATTTTTTATTACCTCATTTAGAAAATGGCAAAATCGTCTTGATCGGTGCTACAACTTCAAATCCTTATCATG
CTATCAATCCAGCGATTCGTTCAAGAGCGCAAATTTTTGAATTATATCCTTTAAATGACGAAGATGTGCGCCAAGCGTTA
ACTCGTGCAATAGAAGATGAAGAGAATGGTTTGAAAACATATCAACCCAAAATTGATGAAGATGCCATGACCTACTTTTC
TACACAAAGTCAAGGTGATGTTCGTAGTGCGCTAAATGCATTGGAATTAGCTGTATTAAGCGCAGATAATGACAAGGACG
GTTATCGACATGTTACATTGCAAGATGCTAAAGACTGTTTACAAAAAGGTGCATTTGTAAGTGATAAGGATGGTGACATG
CATTACGATGTTATGAGCGCTTTCCAAAAATCCATCCGTGGTAGTGACGTCAATGCCGCTTTACATTATTTAGCACGATT
AATTGAAGCTGGAGATTTACCTACAATAGTTCGACGATTACTTGTAATTAGCTATGAGGATATAGGCTTAGCCTCACCTA
ATGCTGGTCAGAGAACACTTGCTGCTATTGAATCAGCAGAACGTCTAGGTTTACCAGAAGCTAGAATCCCACTAAGCCAA
GCAGTAATCGAACTATGCTTATCACCTAAGTCAAATTCAGCAATGAGTGCCATTGATAGTGCATTGTCCGATATTAGAAA
CGGTCATGTGGGCCAAATTCCAAACCATTTAAAAGATGGACATTATCAAGGTGCTAAAGATCTAGGCCGATCTATTGGTT
ACAAATATCCACACCAATATGTTAATGGCTATGTTTCACAGCAATATTTACCTGATAAACTTAAAAACAAAATTTATTAT
GAACCAAAAACGACATCTAAAAGTGAACAACAACTCAAAGAAATATATAACAACTTACTTAAACAAAGACCGTAA

Domains

Predicted by InterProScan.

• MgsA AAA+ ATPase C terminal (MgsA_C) (254-418)

• ATPase family associated with various cellular activities (AAA) (AAA) (43-145)

• AAA C-terminal domain (AAA_assoc_2) (175-253)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	69.286	99.057	0.686