Detailed information NTG1032763

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: AB8V66_RS05225
• Genome accession: NZ_CP165993
• Coordinates: 1025229..1027622 (-)
• Length: 797 a.a.
• NCBI ID: WP_185483098.1
• Uniprot ID: -
• Organism: Listeria ivanovii subsp. ivanovii strain PNUSAL001964
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1020229..1032622

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB8V66_RS05205 (AB8V66_05215)	-	1020689..1021384 (-)	696	WP_014092868.1	ABC transporter ATP-binding protein	-
AB8V66_RS05210 (AB8V66_05220)	-	1021393..1022901 (-)	1509	WP_014092869.1	ABC transporter permease	-
AB8V66_RS05215 (AB8V66_05225)	pieR	1023068..1023754 (+)	687	WP_014092870.1	two component system response regulator PieR	-
AB8V66_RS05220 (AB8V66_05230)	pieS	1023751..1025190 (+)	1440	WP_014092871.1	two component system sensor histidine kinase PieS	-
AB8V66_RS05225 (AB8V66_05235)	recD2	1025229..1027622 (-)	2394	WP_185483098.1	ATP-dependent RecD-like DNA helicase	Machinery gene
AB8V66_RS05230 (AB8V66_05240)	-	1027648..1028286 (-)	639	WP_014092873.1	tetratricopeptide repeat protein	-
AB8V66_RS05235 (AB8V66_05245)	-	1028329..1029069 (-)	741	WP_014092874.1	alpha/beta hydrolase	-
AB8V66_RS05240 (AB8V66_05250)	mnmA	1029188..1030303 (-)	1116	WP_014092875.1	tRNA 2-thiouridine(34) synthase MnmA	-
AB8V66_RS05245 (AB8V66_05255)	-	1030322..1031470 (-)	1149	WP_014092876.1	cysteine desulfurase family protein	-

Sequence

Protein

• Length: 797 a.a.
• Molecular weight: 90115.36 Da
• Isoelectric Point: 4.9786

>NTDB_id=1032763 AB8V66_RS05225 WP_185483098.1 1025229..1027622(-) (recD2) [Listeria ivanovii subsp. ivanovii strain PNUSAL001964]
MAEQESLALFDTPEELFMKGTMLSTIFYNAENLFSVVRILVKETNADWDEKDIIVTGFFPALHEQEVYTFYGKMQEHAKF
GQQFKAERFRKEMPQSRAGLINYLSGELFKGIGKVTAENIVDTIGDDAITRILSDPSLLNNVPKLPSGAAESLLASLREN
QGLEHVMVGLNEYGFGPQLSMKIFQAYKQNAIEVLENNPYKLIEDVKGIGFHRADELGRKLGLGGNHPERLRAGILFMLD
SVCMQQGHVYMEQEALLAEVTFLIEESEGIRIDHAILMEQIEKLAEEQKIIMENTRVYMPSLYYSESGFAYHVKRMLKQT
QYQEQFPQSEFLLALGELEERIGVHYGDSQREALEQALMSPMLVLTGGPGTGKTTVIKGIVELYAELNGVSLDPHAYKDG
ATFPVLLAAPTGRAAKRMSESTGLPSMTIHRLLGMNGQEQMDDDAERLIDGRLLIVDEMSMVDIWLANQLFRALPSHMQV
VLVGDQDQLPSVGPGQVLKDILHSKQIPTVALSDIYRQKDGSSIIEMAHNIKEGMLPADFAKNSADRSFFHCTVNQIGDV
VEQVVKNAKNKGFRAKDIQVLAPMYRGPAGIDILNKKLQEIFNPNDTGRRKEVQFGELKYRIHDKVLQLINQPEKNVFNG
DIGEIVSIIYAKENTEKQDMIVVQFDQTEVSYYRQEFNQLTHAYCCSIHKAQGSEFPIVIMPIVRSYYRMLRRDLLYTGV
TRSKQFLILCGEEEAFRMGVERVDENKRNTTLSERLISEDVMLEQMTNKRILTIENITEIDPMIGMEGITPNQFMAG

Nucleotide

• Length: 2394 bp

>NTDB_id=1032763 AB8V66_RS05225 WP_185483098.1 1025229..1027622(-) (recD2) [Listeria ivanovii subsp. ivanovii strain PNUSAL001964]
ATGGCTGAACAAGAATCTCTCGCTTTATTTGACACGCCAGAAGAGCTTTTTATGAAGGGCACGATGTTGTCCACCATTTT
TTATAATGCCGAAAACCTCTTTTCTGTTGTGCGAATTCTTGTCAAAGAAACCAATGCAGATTGGGATGAAAAAGATATTA
TTGTGACTGGTTTTTTCCCCGCTTTACATGAACAAGAAGTGTATACTTTTTATGGGAAAATGCAGGAACATGCCAAATTT
GGACAGCAATTTAAAGCAGAACGTTTTAGGAAAGAAATGCCGCAATCTCGTGCTGGTTTAATTAATTATCTGTCTGGTGA
GCTTTTTAAAGGTATTGGCAAAGTGACTGCGGAAAATATTGTTGATACAATTGGCGACGATGCAATTACGCGGATTTTAT
CTGATCCAAGTTTACTTAATAATGTTCCAAAGTTACCATCTGGTGCTGCGGAGAGCCTCCTTGCTTCTTTACGAGAAAAT
CAAGGCTTAGAGCATGTGATGGTCGGGCTAAATGAATATGGATTTGGTCCACAACTTTCGATGAAGATTTTTCAAGCATA
TAAACAAAATGCTATCGAAGTACTTGAAAACAATCCATACAAATTAATTGAGGATGTCAAAGGTATTGGATTTCACCGAG
CGGATGAGCTTGGTCGGAAATTAGGACTAGGAGGAAATCATCCTGAACGCCTTCGTGCGGGAATTTTATTTATGCTTGAT
TCTGTATGCATGCAACAAGGCCATGTTTATATGGAACAAGAAGCGCTACTTGCAGAAGTGACCTTTTTGATAGAAGAAAG
TGAAGGTATTCGAATTGATCATGCTATTTTAATGGAACAAATAGAAAAGCTTGCTGAAGAACAAAAAATTATCATGGAAA
ACACACGTGTCTATATGCCATCTTTATATTATTCGGAAAGCGGCTTTGCTTATCATGTAAAACGGATGCTGAAACAAACA
CAGTATCAAGAGCAATTTCCGCAGTCTGAGTTCTTGCTGGCACTTGGAGAGTTAGAAGAGCGAATTGGTGTTCATTACGG
AGATTCGCAGCGAGAGGCGTTAGAGCAAGCTTTAATGTCGCCGATGCTTGTACTTACTGGTGGACCAGGAACAGGGAAGA
CTACTGTTATTAAAGGTATTGTGGAATTATATGCCGAATTAAATGGTGTAAGTCTAGACCCGCATGCTTATAAAGATGGC
GCGACGTTTCCAGTTCTGTTAGCGGCACCAACTGGACGAGCAGCTAAGCGAATGTCTGAGTCAACAGGACTTCCATCAAT
GACCATTCACCGTTTACTCGGTATGAATGGGCAAGAGCAAATGGATGATGATGCAGAAAGATTAATTGATGGTCGGCTTT
TAATTGTAGATGAAATGTCGATGGTGGATATTTGGCTTGCTAACCAACTATTTCGTGCACTTCCTTCGCATATGCAAGTA
GTTTTAGTAGGAGACCAAGACCAATTGCCATCAGTTGGACCAGGACAGGTCTTGAAAGATATACTTCACTCGAAACAAAT
TCCAACCGTTGCGCTTTCAGATATTTATAGGCAAAAAGATGGATCTTCCATTATTGAGATGGCTCATAATATTAAAGAAG
GCATGTTGCCAGCTGATTTTGCGAAAAATAGTGCTGATCGTTCTTTCTTTCACTGTACCGTGAATCAAATTGGTGATGTC
GTTGAACAAGTCGTAAAAAATGCCAAAAATAAAGGTTTCCGCGCAAAAGATATTCAAGTTTTAGCACCGATGTATCGTGG
CCCGGCTGGAATCGATATTTTAAATAAAAAGCTACAAGAAATTTTTAATCCTAATGACACTGGCAGACGTAAAGAAGTGC
AATTTGGCGAATTAAAATATCGTATACATGATAAAGTTTTGCAGTTAATAAATCAACCGGAAAAAAATGTCTTTAACGGC
GATATCGGGGAAATAGTATCGATTATTTATGCGAAGGAAAACACCGAAAAGCAAGATATGATTGTTGTGCAATTTGATCA
AACCGAAGTATCCTATTACCGGCAAGAATTTAATCAATTGACGCATGCTTATTGTTGTTCTATTCATAAAGCACAAGGTA
GCGAGTTTCCCATTGTGATTATGCCAATTGTTCGTAGCTATTACCGAATGTTACGACGTGACTTGTTATATACGGGTGTC
ACTCGAAGCAAGCAATTTTTGATTCTTTGCGGTGAAGAAGAGGCGTTTCGAATGGGTGTTGAGCGTGTCGATGAAAACAA
ACGTAATACGACGCTTTCAGAACGTTTAATAAGTGAAGATGTTATGCTCGAACAAATGACCAATAAACGAATTTTAACTA
TCGAAAATATTACCGAAATAGATCCGATGATTGGGATGGAAGGAATAACCCCCAACCAATTTATGGCAGGCTAA

Domains

Predicted by InterproScan.

• Helix-hairpin-helix containing domain (HHH_RecD2) (159-250)

• AAA domain (AAA_30) (346-553)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (594-665)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (682-730)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	57.234	98.871	0.566