Detailed information NTG1031743

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: AB7T04_RS12630
• Genome accession: NZ_CP165780
• Coordinates: 2589992..2592370 (-)
• Length: 792 a.a.
• NCBI ID: WP_264101092.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain L-15
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2584992..2597370

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB7T04_RS12595 (AB7T04_12595)	-	2586064..2586792 (+)	729	WP_014305489.1	amino acid ABC transporter ATP-binding protein	-
AB7T04_RS12600 (AB7T04_12600)	-	2586813..2587640 (+)	828	WP_070082155.1	transporter substrate-binding domain-containing protein	-
AB7T04_RS12605 (AB7T04_12605)	-	2587697..2588347 (+)	651	WP_069473522.1	amino acid ABC transporter permease	-
AB7T04_RS12610 (AB7T04_12610)	-	2588366..2589022 (+)	657	WP_024085646.1	amino acid ABC transporter permease	-
AB7T04_RS12615 (AB7T04_12615)	-	2589058..2589189 (-)	132	WP_003152741.1	YrzQ family protein	-
AB7T04_RS12620 (AB7T04_12620)	-	2589211..2589402 (-)	192	WP_003152738.1	hypothetical protein	-
AB7T04_RS12625 (AB7T04_12625)	-	2589415..2589873 (-)	459	WP_017418223.1	PRC-barrel domain-containing protein	-
AB7T04_RS12630 (AB7T04_12630)	recD2	2589992..2592370 (-)	2379	WP_264101092.1	ATP-dependent RecD-like DNA helicase	Machinery gene
AB7T04_RS12635 (AB7T04_12635)	-	2592389..2593039 (-)	651	WP_071391561.1	lipopolysaccharide assembly protein LapB	-
AB7T04_RS12640 (AB7T04_12640)	mnmA	2593097..2594212 (-)	1116	WP_058906210.1	tRNA 2-thiouridine(34) synthase MnmA	-
AB7T04_RS12645 (AB7T04_12645)	-	2594249..2595388 (-)	1140	WP_058906211.1	cysteine desulfurase family protein	-
AB7T04_RS12650 (AB7T04_12650)	cymR	2595407..2595823 (-)	417	WP_003152730.1	cysteine metabolism transcriptional regulator CymR	-
AB7T04_RS12655 (AB7T04_12655)	-	2596018..2597286 (+)	1269	WP_071391559.1	replication-associated recombination protein A	-

Sequence

Protein

• Length: 792 a.a.
• Molecular weight: 88306.00 Da
• Isoelectric Point: 4.9836

>NTDB_id=1031743 AB7T04_RS12630 WP_264101092.1 2589992..2592370(-) (recD2) [Bacillus velezensis strain L-15]
MDQLNIEEQPYVKGVIHTVIYHNDTNLYTVLKVKVAETSEAIEDKVVSVTGYFPLLQEDETYTFYGKTATHPKFGLQFQA
EHFKKEIPTTKEGIIHYLSSDLFEGIGKKTAEEIVKKLGDGALNKILTDASVLYDVPKMSKKKADKLAGELQRHQGLEQI
MISLNQYGFGPQLSMKIYQAYETETLEKIQGNPYQLVKDVEGIGFVKADELGGKMGLSGNHPERIKAAILYTIESTCLSE
GHTYIETKQLIINTQTLLNQSAEGGRVTEMDAADGIIALGESKDIVIEGERCYFPSLFYAEQNVAKRVLDIAAQTEYADQ
FPESEFLLALGELEERMNVQYAPSQKDAIQKALSSPMLLLTGGPGTGKTTVIKGIVELYSELHGVSLDPGDYKKDEAFPV
LLAAPTGRAAKRMSESTGLPAVTIHRLLGWNGAEGFTYNEDQPIEGKLIIIDEASMLDIWLASHLFKALPKHIQLIIVGD
EDQLPSVGPGQVLRDLLASEVLPTVRLTDIYRQAEGSSIVELAHDMKKGLLPKGLTAPTKDRSFIRCNSSQIKEVVDQVV
SNALKKGYTSRDIQVLAPMYRGKAGINELNMLLQDIMNPPKEKRRELKFGDVVYRTGDKILQLVNQPENNVFNGDIGEIV
SIFYAKENTEKEDMVVVSFDGNEITFTKKDFSQFTHAYCCSIHKSQGSEFPIVVLPVVKGYYRMLRRNLLYTAITRAKKF
LILCGEEEALEWGVKNNDATVRQTSLKNRLTEQTEEMDAELAALQKELPFSVYDANIGMEGITPFDFMEEKA

Nucleotide

• Length: 2379 bp

>NTDB_id=1031743 AB7T04_RS12630 WP_264101092.1 2589992..2592370(-) (recD2) [Bacillus velezensis strain L-15]
GTGGATCAGCTGAACATCGAAGAACAGCCGTATGTAAAAGGCGTCATTCATACGGTCATTTATCATAATGACACCAACCT
GTATACAGTGCTGAAAGTCAAGGTTGCAGAAACGTCTGAGGCGATCGAAGACAAGGTCGTATCCGTAACGGGCTACTTCC
CTCTGCTGCAAGAAGATGAGACCTACACATTTTACGGAAAAACCGCCACGCATCCTAAGTTCGGCCTGCAATTTCAGGCT
GAACACTTTAAAAAAGAAATCCCGACCACAAAAGAAGGGATCATTCACTATTTATCAAGTGATCTGTTTGAAGGAATCGG
AAAAAAAACGGCGGAAGAAATCGTCAAAAAGCTTGGAGACGGCGCGCTCAATAAAATTCTGACGGATGCGTCGGTGCTTT
ACGATGTGCCGAAAATGTCGAAAAAGAAAGCGGATAAGCTTGCCGGAGAGCTGCAGCGGCATCAGGGTCTTGAGCAGATT
ATGATCTCTCTGAACCAATACGGTTTCGGGCCCCAGCTATCCATGAAAATATATCAGGCCTACGAAACGGAAACCTTGGA
GAAAATTCAGGGAAATCCTTATCAGCTTGTAAAAGATGTGGAAGGCATCGGCTTTGTGAAAGCCGACGAGCTGGGCGGAA
AAATGGGTCTGTCAGGAAACCACCCGGAGCGGATCAAAGCGGCAATCTTATATACGATTGAATCGACCTGTCTTTCAGAG
GGCCATACGTACATAGAGACAAAGCAGCTGATTATCAATACGCAAACGCTCCTGAATCAGTCAGCTGAAGGCGGCCGCGT
CACGGAGATGGATGCGGCTGACGGCATCATCGCCCTCGGGGAGAGTAAGGATATCGTCATCGAAGGAGAGCGCTGCTATT
TTCCGTCATTGTTTTACGCCGAACAAAACGTCGCAAAACGCGTGCTCGACATTGCGGCCCAGACGGAGTATGCCGATCAA
TTTCCTGAATCGGAATTTCTGCTTGCACTCGGTGAACTGGAAGAACGGATGAACGTTCAATACGCACCAAGCCAAAAGGA
TGCCATTCAAAAAGCGCTGTCCTCGCCGATGCTTTTACTGACCGGGGGACCTGGAACGGGGAAAACGACCGTTATTAAAG
GAATCGTGGAATTATACAGTGAACTGCACGGCGTATCGCTTGACCCCGGTGATTATAAAAAAGACGAGGCGTTTCCGGTG
CTGCTTGCCGCGCCGACCGGAAGAGCCGCAAAACGGATGAGCGAATCTACGGGTCTGCCGGCTGTTACGATTCACAGGCT
GCTTGGCTGGAATGGCGCTGAAGGCTTTACCTATAATGAAGATCAGCCGATTGAAGGAAAACTGATCATTATAGACGAAG
CGAGTATGCTCGATATTTGGCTCGCCAGCCATTTGTTTAAGGCGCTCCCTAAGCACATTCAGCTCATTATAGTCGGTGAT
GAAGATCAGCTTCCTTCAGTAGGACCGGGACAGGTGCTCAGAGACCTTTTGGCTTCTGAGGTGCTGCCGACCGTACGCCT
GACAGATATTTACCGTCAGGCTGAAGGATCATCCATTGTGGAACTTGCCCATGATATGAAAAAAGGACTGCTTCCAAAGG
GGCTGACCGCGCCGACAAAGGACCGCTCATTTATCCGCTGTAATTCTTCACAGATTAAAGAAGTCGTGGACCAGGTCGTC
TCGAACGCGTTAAAAAAGGGGTATACCTCCAGAGATATTCAAGTGCTTGCCCCGATGTACAGGGGAAAAGCGGGAATTAA
CGAGCTGAACATGCTTCTTCAGGACATCATGAATCCGCCTAAAGAAAAAAGGCGGGAGCTGAAATTCGGAGATGTCGTCT
ACAGGACGGGCGATAAAATATTGCAGCTTGTCAACCAGCCGGAAAACAATGTGTTTAACGGCGATATCGGCGAAATCGTG
TCCATTTTTTATGCCAAAGAAAATACGGAAAAAGAAGACATGGTCGTCGTCTCGTTTGACGGCAACGAAATCACCTTTAC
GAAAAAAGATTTCAGCCAGTTTACCCACGCTTACTGCTGTTCCATCCATAAGTCGCAGGGAAGCGAATTCCCGATTGTCG
TCCTGCCTGTCGTCAAAGGCTACTATCGAATGCTCAGGAGAAATCTGCTTTATACCGCCATTACAAGAGCGAAAAAATTC
CTGATTCTTTGCGGAGAAGAAGAAGCGCTTGAATGGGGCGTCAAAAACAATGATGCCACCGTCAGACAGACGTCGCTTAA
AAACAGGCTCACAGAGCAGACTGAAGAGATGGATGCAGAACTGGCCGCCCTGCAAAAAGAGCTGCCGTTCAGTGTATACG
ATGCGAACATCGGAATGGAAGGCATCACGCCTTTTGACTTTATGGAAGAAAAAGCGTAA

Domains

Predicted by InterproScan.

• Helix-hairpin-helix containing domain (HHH_RecD2) (154-244)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (676-724)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (589-659)

• AAA domain (AAA_30) (341-548)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	88.875	99.874	0.888