Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   AB4X21_RS08310 Genome accession   NZ_CP163380
Coordinates   1635629..1637431 (-) Length   600 a.a.
NCBI ID   WP_369087795.1    Uniprot ID   A0AB39LD94
Organism   Streptococcus sp. CP1998     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1630629..1642431
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB4X21_RS08290 (AB4X21_08290) queG 1630757..1631896 (+) 1140 WP_320911209.1 tRNA epoxyqueuosine(34) reductase QueG -
  AB4X21_RS08295 (AB4X21_08295) - 1632245..1632871 (-) 627 WP_155172473.1 GNAT family N-acetyltransferase -
  AB4X21_RS08300 (AB4X21_08300) - 1632955..1633470 (-) 516 WP_369087793.1 phosphatase PAP2 family protein -
  AB4X21_RS08305 (AB4X21_08305) rcrQ 1633876..1635636 (-) 1761 WP_369087794.1 ABC transporter ATP-binding protein Regulator
  AB4X21_RS08310 (AB4X21_08310) rcrP 1635629..1637431 (-) 1803 WP_369087795.1 ABC transporter ATP-binding protein Regulator
  AB4X21_RS08315 (AB4X21_08315) - 1637428..1637874 (-) 447 WP_037606939.1 MarR family winged helix-turn-helix transcriptional regulator -
  AB4X21_RS08320 (AB4X21_08320) - 1638010..1638420 (-) 411 WP_003013493.1 peptide deformylase -
  AB4X21_RS08325 (AB4X21_08325) scrK 1638668..1639567 (-) 900 WP_003016958.1 fructokinase ScrK -
  AB4X21_RS08330 (AB4X21_08330) - 1639727..1641646 (-) 1920 WP_003008594.1 sucrose-specific PTS transporter subunit IIBC -

Sequence

Protein


Download         Length: 600 a.a.        Molecular weight: 66388.14 Da        Isoelectric Point: 8.9177

>NTDB_id=1029445 AB4X21_RS08310 WP_369087795.1 1635629..1637431(-) (rcrP) [Streptococcus sp. CP1998]
MINIFRRLTAKEWGMIALSTVFICLAVWMDLKTPEYLSDITTLLAKDGTKVSDIMDPGSKMLLFSFGSFLMAVFVGFLAS
RVAASFTTRLRGDIFHQVMDYSDAEIKKFSVPSLLTRTTNDLTQLQIMIVMGMQVVTRGPIMAIWALTKIWGKSSAWTTS
VGIAVLMVLILLSILVLIAFPRQQKVQGLTDALNATTRESLTGVRVVRAYNAEAYQNEKFQAENKGLTRLNLFVYRLMSL
MNPVMTVVSSGLTLAIYWIGAHLINDIAMPKDPTKIFTSPALADRTKVFSDMITFSSYAMQVVIGFMMMVAILIILPRAL
VSAKRINQVLALEPSVDFPSESKTESGEKGSVEFQDVSFRYGRTSRAVIEHVTFSAQKGQTVAFIGSTGSGKSTLVNLIS
RFYDATEGKILVDGVNVKDYSHQELNNKVGYIPQKAVLFSGTIRSNMEFGESSQGKLEDEAIWKALELAQAKEFVAAKEK
GLDTEVAQGGSNFSGGQRQRLAIARALARKPEILIFDDSFSALDYKTDRILRQALKEELADTTKLIVAQRISTIMDADLI
LVLDQGKVVGQGTHKELLATNEVYQEIAYSQLSKEELEHA

Nucleotide


Download         Length: 1803 bp        

>NTDB_id=1029445 AB4X21_RS08310 WP_369087795.1 1635629..1637431(-) (rcrP) [Streptococcus sp. CP1998]
ATGATCAATATATTTCGGCGGTTAACCGCCAAAGAATGGGGCATGATTGCCCTTAGTACGGTCTTTATCTGTCTGGCTGT
TTGGATGGATTTAAAGACTCCTGAATACTTATCCGATATCACGACCCTCTTAGCTAAGGATGGGACTAAGGTTTCTGATA
TCATGGATCCGGGAAGCAAGATGTTGCTCTTCTCTTTTGGAAGCTTTTTGATGGCAGTTTTTGTGGGCTTTTTGGCTTCA
AGAGTCGCTGCCAGCTTTACGACGCGACTTCGAGGAGATATTTTCCATCAAGTGATGGATTACTCTGATGCCGAGATCAA
GAAATTCTCCGTTCCCTCTCTCTTGACCCGGACGACCAACGATTTGACTCAATTGCAAATCATGATTGTCATGGGGATGC
AAGTTGTGACGCGTGGTCCCATTATGGCGATTTGGGCCTTAACCAAGATTTGGGGGAAGAGCAGTGCCTGGACAACGTCT
GTTGGGATTGCAGTCTTGATGGTCTTGATTCTTCTTTCTATTCTGGTTCTTATTGCCTTTCCACGTCAGCAAAAGGTTCA
AGGTTTGACCGATGCCTTGAATGCGACGACACGGGAGAGTTTGACTGGGGTGCGGGTCGTTCGTGCCTACAATGCTGAAG
CTTATCAAAATGAGAAATTCCAGGCTGAAAACAAGGGCTTAACCCGTCTAAATCTCTTTGTTTATCGGTTGATGTCTTTG
ATGAACCCGGTTATGACAGTGGTATCAAGTGGGTTGACCCTTGCTATCTACTGGATTGGGGCGCACTTGATCAATGATAT
CGCCATGCCAAAAGATCCCACAAAGATCTTCACCAGTCCTGCCTTAGCGGATCGGACCAAGGTCTTCTCCGATATGATCA
CCTTCTCCTCTTACGCCATGCAGGTTGTCATTGGCTTTATGATGATGGTAGCCATCTTGATTATTCTTCCTCGTGCACTA
GTATCCGCGAAACGGATTAATCAGGTCTTGGCTCTAGAGCCGTCTGTTGATTTTCCATCTGAGTCCAAGACTGAGTCTGG
AGAAAAAGGAAGTGTAGAATTTCAAGATGTTTCCTTCCGATATGGAAGGACTTCTCGTGCGGTGATTGAACACGTGACCT
TCTCAGCTCAGAAAGGACAAACCGTTGCTTTCATTGGATCAACTGGTTCTGGGAAATCCACTTTGGTCAATTTAATCTCA
CGTTTTTACGATGCGACAGAAGGAAAGATCTTAGTGGATGGGGTCAATGTCAAGGACTATAGCCACCAAGAATTGAACAA
TAAAGTCGGCTACATTCCACAAAAAGCAGTGCTCTTTAGTGGCACGATTCGCTCCAATATGGAATTTGGAGAAAGTAGTC
AAGGAAAATTAGAGGATGAAGCCATCTGGAAAGCTCTTGAATTGGCCCAAGCTAAAGAGTTTGTGGCCGCAAAAGAAAAA
GGCTTGGATACAGAAGTAGCGCAAGGAGGAAGCAACTTCTCTGGCGGTCAACGTCAACGCTTGGCCATTGCGCGTGCCCT
TGCACGCAAGCCCGAGATCCTCATCTTTGATGATTCCTTCTCAGCCCTGGATTACAAAACGGATCGTATCTTGCGACAAG
CCCTAAAAGAAGAGTTGGCAGATACGACCAAATTGATCGTTGCCCAACGGATTTCGACCATTATGGATGCAGATTTGATT
TTGGTCTTGGATCAAGGGAAGGTCGTCGGTCAAGGTACCCACAAGGAATTGCTTGCGACTAATGAAGTCTATCAAGAAAT
TGCCTATTCACAATTGTCTAAGGAGGAGTTGGAACATGCATAA

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(17-266)

ABC transporter (ABC_tran)

(370-519)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

78.333

100

0.783

Multiple sequence alignment