Detailed information NTG0102777

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: AW03_RS13285
• Genome accession: NZ_CP007173
• Coordinates: 2574334..2575599 (+)
• Length: 421 a.a.
• NCBI ID: WP_015483504.1
• Uniprot ID: -
• Organism: Bacillus subtilis HJ5
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2569334..2580599

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AW03_RS13265 (AW03_025620)	yrrB	2570705..2571325 (-)	621	WP_206697897.1	tetratricopeptide repeat protein	-
AW03_RS13270 (AW03_025630)	mnmA	2571411..2572526 (-)	1116	WP_015483502.1	tRNA 2-thiouridine(34) synthase MnmA	-
AW03_RS13275 (AW03_025640)	iscSA	2572554..2573696 (-)	1143	WP_015384237.1	cysteine desulfurase family protein	-
AW03_RS13280 (AW03_025650)	cymR	2573715..2574131 (-)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
AW03_RS13285 (AW03_025660)	rarA	2574334..2575599 (+)	1266	WP_015483504.1	replication-associated recombination protein A	Machinery gene
AW03_RS13290 (AW03_025670)	tcdA	2575639..2576403 (-)	765	WP_015384240.1	tRNA threonylcarbamoyladenosine dehydratase	-
AW03_RS13300 (AW03_025680)	aspS	2576739..2578517 (-)	1779	WP_015384241.1	aspartate--tRNA ligase	-
AW03_RS13305 (AW03_025690)	hisS	2578531..2579805 (-)	1275	WP_015384242.1	histidine--tRNA ligase	-
AW03_RS21310 (AW03_025700)	yrzK	2580186..2580356 (-)	171	WP_004399157.1	YrzK family protein	-

Sequence

Protein

• Length: 421 a.a.
• Molecular weight: 46486.28 Da
• Isoelectric Point: 7.0446

>NTDB_id=102777 AW03_RS13285 WP_015483504.1 2574334..2575599(+) (rarA) [Bacillus subtilis HJ5]
MKPLAYRMRPTKIEDIIGQQHLVAEDKIIGRMVQAKHLSSMILYGPPGIGKTSIATAIAGSTSIAFRKLNAVINNKKDME
IVAQEAKMSGQVILILDEVHRLDKGKQDFLLPYLENGMIILIGATTANPYHAINPAIRSRTQIFELEPLTPDLIKQALER
ALHDEHRGLGTYSVSIDDQAMEHFAHGCGGDVRSALNALELAVLSTKESADGEIHITLETAEECLQKKSFSHDKDGDAHY
DVLSAFQKSIRGSDANAALHYLARLIEAGDLESIARRLLVIAYEDIGLASPQAGPRVLNAIQTAERVGFPEARIPLANAV
IELCLSPKSNSAILAIDEALADIRAGKIGDVPKHLKDAHYKGAQELGRGIDYKYPHNYDNGWVEQQYLPDPLKNKQYYKP
KQTGKFESALKQVYDNLMKRK

Nucleotide

• Length: 1266 bp

>NTDB_id=102777 AW03_RS13285 WP_015483504.1 2574334..2575599(+) (rarA) [Bacillus subtilis HJ5]
ATGAAGCCATTGGCATATCGGATGCGTCCGACAAAAATAGAGGATATTATCGGCCAGCAGCATCTGGTGGCTGAAGATAA
AATTATTGGCAGAATGGTCCAGGCAAAACATTTGTCATCCATGATTTTGTACGGGCCGCCCGGAATTGGAAAAACATCAA
TCGCAACAGCAATCGCCGGTTCAACAAGTATTGCTTTTCGAAAGCTGAATGCTGTCATTAACAATAAAAAAGATATGGAA
ATTGTAGCCCAGGAAGCCAAGATGTCCGGCCAAGTGATTTTGATTCTGGATGAAGTCCACAGGCTGGATAAAGGAAAACA
GGATTTTCTATTACCCTATTTGGAAAACGGGATGATCATTTTGATCGGAGCAACCACAGCTAACCCGTATCATGCCATTA
ATCCGGCGATCAGAAGCCGGACCCAGATTTTTGAGCTTGAGCCGTTAACACCCGATCTGATTAAACAGGCACTGGAACGT
GCGCTCCATGATGAACATCGGGGCCTTGGCACCTATTCTGTATCCATTGATGATCAGGCGATGGAGCATTTCGCCCACGG
ATGCGGAGGAGATGTCCGCTCCGCTTTAAATGCGCTTGAGCTTGCCGTGTTGTCAACGAAGGAGTCAGCAGACGGTGAAA
TTCACATTACATTAGAAACCGCGGAAGAATGCTTGCAGAAAAAAAGCTTTTCTCACGATAAAGATGGTGACGCGCATTAT
GATGTACTGTCCGCTTTTCAAAAATCGATACGTGGCTCTGATGCCAACGCTGCTCTCCACTATTTGGCTAGATTAATTGA
AGCCGGTGATCTGGAGAGCATCGCAAGACGATTGCTTGTTATCGCCTATGAAGATATCGGTTTAGCAAGCCCGCAAGCCG
GCCCTAGAGTGCTGAACGCTATTCAGACCGCTGAGCGAGTCGGGTTTCCTGAAGCGCGAATCCCGCTGGCCAACGCAGTT
ATTGAGCTTTGCCTCTCACCGAAATCAAACTCTGCCATTCTGGCAATCGATGAGGCCCTGGCAGATATCAGAGCCGGAAA
AATTGGTGATGTCCCGAAGCATTTAAAAGACGCGCATTATAAAGGGGCTCAGGAATTAGGAAGAGGAATCGACTATAAAT
ACCCGCACAATTACGACAACGGTTGGGTCGAACAACAATACCTCCCTGATCCTCTGAAAAATAAGCAATACTATAAGCCG
AAACAGACAGGAAAATTCGAATCCGCCTTAAAGCAGGTGTACGATAATTTAATGAAAAGAAAATAA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (172-251)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (8-125)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-416)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	99.525	100	0.995