Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | AB3452_RS08845 | Genome accession | NZ_CP162478 |
| Coordinates | 1752421..1752720 (+) | Length | 99 a.a. |
| NCBI ID | WP_000844413.1 | Uniprot ID | X5E258 |
| Organism | Staphylococcus aureus strain TUM20816 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1747421..1757720
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AB3452_RS08805 (AB3452_08805) | - | 1747482..1747685 (+) | 204 | WP_000087561.1 | YqgQ family protein | - |
| AB3452_RS08810 (AB3452_08810) | - | 1747682..1748668 (+) | 987 | WP_000161314.1 | ROK family glucokinase | - |
| AB3452_RS08815 (AB3452_08815) | - | 1748668..1748997 (+) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| AB3452_RS08820 (AB3452_08820) | - | 1748994..1749617 (+) | 624 | WP_001223008.1 | MBL fold metallo-hydrolase | - |
| AB3452_RS08825 (AB3452_08825) | comGA | 1749669..1750643 (+) | 975 | WP_000697228.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| AB3452_RS08830 (AB3452_08830) | comGB | 1750615..1751685 (+) | 1071 | WP_000775708.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| AB3452_RS08835 (AB3452_08835) | comGC | 1751699..1752010 (+) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| AB3452_RS08840 (AB3452_08840) | comGD | 1751988..1752434 (+) | 447 | WP_001790850.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| AB3452_RS08845 (AB3452_08845) | comGE | 1752421..1752720 (+) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| AB3452_RS08850 (AB3452_08850) | comGF | 1752638..1753135 (+) | 498 | WP_001789864.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| AB3452_RS08855 (AB3452_08855) | - | 1753232..1753378 (+) | 147 | WP_001789879.1 | hypothetical protein | - |
| AB3452_RS08860 (AB3452_08860) | - | 1753368..1753892 (+) | 525 | WP_001015117.1 | shikimate kinase | - |
| AB3452_RS08865 (AB3452_08865) | gcvT | 1754051..1755142 (+) | 1092 | WP_000093349.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| AB3452_RS08870 (AB3452_08870) | gcvPA | 1755162..1756508 (+) | 1347 | WP_000019687.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11093.20 Da Isoelectric Point: 9.9215
>NTDB_id=1026393 AB3452_RS08845 WP_000844413.1 1752421..1752720(+) (comGE) [Staphylococcus aureus strain TUM20816]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=1026393 AB3452_RS08845 WP_000844413.1 1752421..1752720(+) (comGE) [Staphylococcus aureus strain TUM20816]
ATGAAAAGCTATAAGTGTAAAGGTTCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGTTCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
86.842 |
100 |
1 |
| comGE | Staphylococcus aureus N315 |
98.99 |
100 |
0.99 |