Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | AB3444_RS04955 | Genome accession | NZ_CP162475 |
| Coordinates | 1038111..1038410 (-) | Length | 99 a.a. |
| NCBI ID | WP_000844413.1 | Uniprot ID | X5E258 |
| Organism | Staphylococcus aureus strain TUM20817 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1033111..1043410
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AB3444_RS04930 (AB3444_04930) | gcvPA | 1034323..1035669 (-) | 1347 | WP_000019687.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
| AB3444_RS04935 (AB3444_04935) | gcvT | 1035689..1036780 (-) | 1092 | WP_000093349.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| AB3444_RS04940 (AB3444_04940) | - | 1036939..1037463 (-) | 525 | WP_001015117.1 | shikimate kinase | - |
| AB3444_RS04945 (AB3444_04945) | - | 1037453..1037599 (-) | 147 | WP_001789879.1 | hypothetical protein | - |
| AB3444_RS04950 (AB3444_04950) | comGF | 1037696..1038193 (-) | 498 | WP_001789864.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| AB3444_RS04955 (AB3444_04955) | comGE | 1038111..1038410 (-) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| AB3444_RS04960 (AB3444_04960) | comGD | 1038397..1038843 (-) | 447 | WP_001790850.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| AB3444_RS04965 (AB3444_04965) | comGC | 1038821..1039132 (-) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| AB3444_RS04970 (AB3444_04970) | comGB | 1039146..1040216 (-) | 1071 | WP_000775708.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| AB3444_RS04975 (AB3444_04975) | comGA | 1040188..1041162 (-) | 975 | WP_000697228.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| AB3444_RS04980 (AB3444_04980) | - | 1041214..1041837 (-) | 624 | WP_001223008.1 | MBL fold metallo-hydrolase | - |
| AB3444_RS04985 (AB3444_04985) | - | 1041834..1042163 (-) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| AB3444_RS04990 (AB3444_04990) | - | 1042163..1043149 (-) | 987 | WP_000161314.1 | ROK family glucokinase | - |
| AB3444_RS04995 (AB3444_04995) | - | 1043146..1043349 (-) | 204 | WP_000087561.1 | YqgQ family protein | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11093.20 Da Isoelectric Point: 9.9215
>NTDB_id=1026336 AB3444_RS04955 WP_000844413.1 1038111..1038410(-) (comGE) [Staphylococcus aureus strain TUM20817]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=1026336 AB3444_RS04955 WP_000844413.1 1038111..1038410(-) (comGE) [Staphylococcus aureus strain TUM20817]
ATGAAAAGCTATAAGTGTAAAGGTTCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGTTCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
86.842 |
100 |
1 |
| comGE | Staphylococcus aureus N315 |
98.99 |
100 |
0.99 |