Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | AB3433_RS02840 | Genome accession | NZ_CP162469 |
| Coordinates | 526894..527193 (+) | Length | 99 a.a. |
| NCBI ID | WP_000844413.1 | Uniprot ID | X5E258 |
| Organism | Staphylococcus aureus strain TUM20820 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 521894..532193
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AB3433_RS02800 (AB3433_02800) | - | 521955..522158 (+) | 204 | WP_000087561.1 | YqgQ family protein | - |
| AB3433_RS02805 (AB3433_02805) | - | 522155..523141 (+) | 987 | WP_000161314.1 | ROK family glucokinase | - |
| AB3433_RS02810 (AB3433_02810) | - | 523141..523470 (+) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| AB3433_RS02815 (AB3433_02815) | - | 523467..524090 (+) | 624 | WP_001223010.1 | MBL fold metallo-hydrolase | - |
| AB3433_RS02820 (AB3433_02820) | comGA | 524142..525116 (+) | 975 | WP_000697220.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| AB3433_RS02825 (AB3433_02825) | comGB | 525088..526158 (+) | 1071 | WP_000776422.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| AB3433_RS02830 (AB3433_02830) | comGC | 526172..526483 (+) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| AB3433_RS02835 (AB3433_02835) | comGD | 526461..526907 (+) | 447 | WP_001788899.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| AB3433_RS02840 (AB3433_02840) | comGE | 526894..527193 (+) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| AB3433_RS02845 (AB3433_02845) | comGF | 527111..527608 (+) | 498 | WP_001789864.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| AB3433_RS02850 (AB3433_02850) | - | 527705..527851 (+) | 147 | WP_001789879.1 | hypothetical protein | - |
| AB3433_RS02855 (AB3433_02855) | - | 527841..528365 (+) | 525 | WP_001015121.1 | shikimate kinase | - |
| AB3433_RS02860 (AB3433_02860) | gcvT | 528524..529615 (+) | 1092 | WP_000093349.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| AB3433_RS02865 (AB3433_02865) | gcvPA | 529635..530981 (+) | 1347 | WP_117200971.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11093.20 Da Isoelectric Point: 9.9215
>NTDB_id=1026208 AB3433_RS02840 WP_000844413.1 526894..527193(+) (comGE) [Staphylococcus aureus strain TUM20820]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=1026208 AB3433_RS02840 WP_000844413.1 526894..527193(+) (comGE) [Staphylococcus aureus strain TUM20820]
ATGAAAAGCTATAAGTGTAAAGGTTCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGTTCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
86.842 |
100 |
1 |
| comGE | Staphylococcus aureus N315 |
98.99 |
100 |
0.99 |