Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | AB3447_RS13655 | Genome accession | NZ_CP162456 |
| Coordinates | 2755324..2755794 (+) | Length | 156 a.a. |
| NCBI ID | WP_000934770.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain TUM20915 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2750324..2760794
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AB3447_RS13620 (AB3447_13620) | - | 2750648..2750968 (+) | 321 | WP_001120197.1 | DUF771 domain-containing protein | - |
| AB3447_RS13625 (AB3447_13625) | - | 2750965..2751126 (+) | 162 | WP_000066020.1 | DUF1270 domain-containing protein | - |
| AB3447_RS13630 (AB3447_13630) | - | 2751219..2751479 (+) | 261 | WP_000291489.1 | DUF1108 family protein | - |
| AB3447_RS13635 (AB3447_13635) | - | 2751488..2751751 (+) | 264 | WP_001205732.1 | hypothetical protein | - |
| AB3447_RS13640 (AB3447_13640) | - | 2751760..2753703 (+) | 1944 | WP_000700562.1 | AAA family ATPase | - |
| AB3447_RS13645 (AB3447_13645) | - | 2753705..2754625 (+) | 921 | WP_000138481.1 | recombinase RecT | - |
| AB3447_RS13650 (AB3447_13650) | - | 2754706..2755323 (+) | 618 | WP_071621397.1 | MBL fold metallo-hydrolase | - |
| AB3447_RS13655 (AB3447_13655) | ssbA | 2755324..2755794 (+) | 471 | WP_000934770.1 | single-stranded DNA-binding protein | Machinery gene |
| AB3447_RS13660 (AB3447_13660) | - | 2755824..2756708 (+) | 885 | WP_000148301.1 | DnaD domain protein | - |
| AB3447_RS13665 (AB3447_13665) | - | 2756715..2756933 (+) | 219 | WP_000338528.1 | hypothetical protein | - |
| AB3447_RS13670 (AB3447_13670) | - | 2756942..2757346 (+) | 405 | WP_000401969.1 | RusA family crossover junction endodeoxyribonuclease | - |
| AB3447_RS13675 (AB3447_13675) | - | 2757359..2757727 (+) | 369 | WP_000101274.1 | SA1788 family PVL leukocidin-associated protein | - |
| AB3447_RS13680 (AB3447_13680) | - | 2757731..2757973 (+) | 243 | WP_000131366.1 | SAV1978 family virulence-associated passenger protein | - |
| AB3447_RS13685 (AB3447_13685) | - | 2758038..2758487 (+) | 450 | WP_000982711.1 | YopX family protein | - |
| AB3447_RS13690 (AB3447_13690) | - | 2758484..2758993 (+) | 510 | WP_001105598.1 | hypothetical protein | - |
| AB3447_RS13695 (AB3447_13695) | - | 2758990..2759400 (+) | 411 | WP_000197968.1 | hypothetical protein | - |
| AB3447_RS13700 (AB3447_13700) | - | 2759393..2759518 (+) | 126 | Protein_2657 | DUF1024 family protein | - |
| AB3447_RS13705 (AB3447_13705) | - | 2759874..2760410 (+) | 537 | WP_001066444.1 | dUTPase | - |
| AB3447_RS13710 (AB3447_13710) | - | 2760447..2760653 (+) | 207 | WP_000195810.1 | DUF1381 domain-containing protein | - |
Sequence
Protein
Download Length: 156 a.a. Molecular weight: 17713.63 Da Isoelectric Point: 5.2672
>NTDB_id=1025969 AB3447_RS13655 WP_000934770.1 2755324..2755794(+) (ssbA) [Staphylococcus aureus strain TUM20915]
MLNRTILVGRLTRDPELRTTQSGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAENVNKYLSKGSLTGVDGRLQTR
NYENKEGQRVYVTEVIADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANVPIEIDDNDLPF
MLNRTILVGRLTRDPELRTTQSGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAENVNKYLSKGSLTGVDGRLQTR
NYENKEGQRVYVTEVIADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANVPIEIDDNDLPF
Nucleotide
Download Length: 471 bp
>NTDB_id=1025969 AB3447_RS13655 WP_000934770.1 2755324..2755794(+) (ssbA) [Staphylococcus aureus strain TUM20915]
ATGCTAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGAACCACTCAAAGTGGTGTAAATGTAGC
ATCATTCACATTAGCAGTTAACCGCACATTTACGAATGCACAAGGAGAGCGCGAGGCAGACTTTATTAATATCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGACGGGCGTAGATGGTAGGTTACAAACGCGG
AATTATGAAAATAAGGAAGGTCAACGTGTATATGTTACGGAAGTTATTGCTGATAGTATTCAATTTTTAGAACCGAAAAA
CTCAAATGACACTCAACAAGATTTATACCAACAACAAGTACAACAAACACGTGGACAATCGCAATATTCAAATAACAAAC
CAGTAAAAGATAATCCGTTTGCGAATGCAAATGTTCCGATTGAAATAGATGACAATGATTTACCATTCTAA
ATGCTAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGAACCACTCAAAGTGGTGTAAATGTAGC
ATCATTCACATTAGCAGTTAACCGCACATTTACGAATGCACAAGGAGAGCGCGAGGCAGACTTTATTAATATCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGACGGGCGTAGATGGTAGGTTACAAACGCGG
AATTATGAAAATAAGGAAGGTCAACGTGTATATGTTACGGAAGTTATTGCTGATAGTATTCAATTTTTAGAACCGAAAAA
CTCAAATGACACTCAACAAGATTTATACCAACAACAAGTACAACAAACACGTGGACAATCGCAATATTCAAATAACAAAC
CAGTAAAAGATAATCCGTTTGCGAATGCAAATGTTCCGATTGAAATAGATGACAATGATTTACCATTCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
55.367 |
100 |
0.628 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
50.588 |
100 |
0.551 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
59.434 |
67.949 |
0.404 |
| ssb | Glaesserella parasuis strain SC1401 |
32.203 |
100 |
0.365 |