Detailed information NTG1025898

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: DQL22_RS09760
• Genome accession: NZ_LS483485
• Coordinates: 2022507..2023829 (-)
• Length: 440 a.a.
• NCBI ID: WP_005703537.1
• Uniprot ID: -
• Organism: Aggregatibacter aphrophilus strain NCTC11096
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2017507..2028829

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQL22_RS09750 (NCTC11096_01957)	serS	2018941..2020248 (-)	1308	WP_109843259.1	serine--tRNA ligase	-
DQL22_RS09755 (NCTC11096_01958)	-	2020548..2022215 (+)	1668	WP_005703539.1	anaerobic C4-dicarboxylate transporter	-
DQL22_RS09760 (NCTC11096_01959)	rarA	2022507..2023829 (-)	1323	WP_005703537.1	replication-associated recombination protein A	Machinery gene
DQL22_RS09765 (NCTC11096_01960)	lolA	2023842..2024459 (-)	618	WP_005703536.1	outer membrane lipoprotein chaperone LolA	-
DQL22_RS09770 (NCTC11096_01961)	-	2024570..2027326 (-)	2757	WP_005703535.1	DNA translocase FtsK	-
DQL22_RS09775 (NCTC11096_01962)	lrp	2027344..2027823 (-)	480	WP_005702602.1	leucine-responsive transcriptional regulator Lrp	-

Sequence

Protein

• Length: 440 a.a.
• Molecular weight: 49055.89 Da
• Isoelectric Point: 5.7541

>NTDB_id=1025898 DQL22_RS09760 WP_005703537.1 2022507..2023829(-) (rarA) [Aggregatibacter aphrophilus strain NCTC11096]
MSNFSFDFNENDFRPLAARMRPTTLAQYCGQSHLLGEGKPLRKAIEAGYVHSMIFWGPPGTGKTTLAEIIAQRINAEVER
ISAVTSGIKEIREAIEKAKQNKLAGLRTILFVDEVHRFNKSQQDAFLPHIEDGTIIFIGATTENPSFELNNALLSRARVY
ILKPLSTQEIERVLQQAIDDQENGLGKVRLDLQENLLSLLAEYVNGDARLALNCLEMMVDMAAESKNGKILDRTLLTEVL
GERQARFDKQGDRFYDFISALHKSIRGSAPDAALYWYARIITAGGDPLYVARRLLAIASEDVGNADPRAMQVAIAAWDCF
TRVGAAEGERAIAQAIVYLAVAPKSNAVYLAFKAAKKLATESADFDVPEHLRNAPTNLMKDLGFGAEYRYAHDEPNAYAA
GENYFPPQLKDTQFYFPTTRGMEIKIKEKLEWLKGLDQES

Nucleotide

• Length: 1323 bp

>NTDB_id=1025898 DQL22_RS09760 WP_005703537.1 2022507..2023829(-) (rarA) [Aggregatibacter aphrophilus strain NCTC11096]
ATGTCCAACTTCAGCTTTGATTTTAACGAAAATGATTTCCGCCCACTCGCCGCAAGAATGCGTCCAACTACATTGGCGCA
ATATTGCGGTCAGTCGCATTTATTGGGTGAAGGCAAACCGTTACGCAAAGCCATTGAGGCGGGATACGTCCATTCCATGA
TTTTCTGGGGGCCGCCAGGCACCGGAAAAACCACTTTGGCAGAGATTATCGCTCAACGCATTAACGCTGAAGTCGAGCGA
ATTTCTGCCGTCACCAGTGGCATTAAAGAAATTCGTGAAGCCATTGAAAAAGCCAAACAAAACAAATTGGCGGGTCTGCG
CACCATTTTGTTTGTGGACGAAGTTCACCGTTTCAACAAAAGCCAGCAAGACGCGTTTCTGCCACATATCGAAGACGGCA
CCATTATTTTTATTGGTGCCACCACGGAAAATCCTTCTTTTGAATTAAATAACGCGCTACTTTCCCGCGCACGGGTTTAT
ATTCTCAAACCGCTTTCTACGCAGGAAATTGAACGCGTTTTGCAACAAGCGATCGACGATCAGGAAAATGGCTTGGGCAA
AGTACGGTTAGATTTGCAGGAGAATTTGTTGTCGCTTTTGGCAGAATACGTCAACGGCGATGCACGCCTTGCGTTGAACT
GTTTGGAAATGATGGTGGACATGGCCGCTGAATCCAAAAACGGCAAAATTTTAGACCGCACTTTACTTACGGAAGTGTTG
GGCGAACGGCAGGCGCGTTTTGATAAACAAGGCGATCGTTTCTACGATTTCATTTCCGCGCTACATAAATCCATTCGCGG
ATCCGCACCGGATGCGGCGCTCTATTGGTATGCCCGCATTATCACTGCCGGCGGTGATCCGCTTTACGTGGCTCGCCGTT
TATTGGCGATTGCCTCGGAAGATGTGGGTAATGCCGATCCGCGTGCGATGCAGGTTGCCATTGCTGCATGGGATTGTTTT
ACCCGTGTCGGTGCCGCCGAAGGCGAACGCGCCATTGCGCAAGCTATTGTCTATTTAGCCGTTGCGCCAAAAAGCAACGC
TGTTTACCTCGCCTTCAAAGCAGCGAAAAAACTGGCGACTGAATCTGCTGATTTTGATGTGCCGGAACACCTCCGCAACG
CCCCAACCAATCTCATGAAAGACCTCGGCTTCGGTGCCGAATACCGCTACGCCCACGACGAACCCAACGCCTACGCCGCC
GGCGAAAACTACTTCCCGCCACAACTCAAAGACACCCAATTTTATTTCCCTACTACAAGAGGCATGGAGATTAAGATTAA
GGAAAAGTTGGAGTGGTTAAAAGGGCTAGATCAGGAAAGTTAG

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (189-266)

• MgsA AAA+ ATPase C terminal (MgsA_C) (267-433)

• ATPase family associated with various cellular activities (AAA) (AAA) (53-163)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	39.416	93.409	0.368