Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | AB3436_RS13520 | Genome accession | NZ_CP162425 |
| Coordinates | 2720020..2720319 (-) | Length | 99 a.a. |
| NCBI ID | WP_000844413.1 | Uniprot ID | X5E258 |
| Organism | Staphylococcus aureus strain TUM22721 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 2715020..2725319
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AB3436_RS13495 (AB3436_13485) | gcvPA | 2716232..2717578 (-) | 1347 | WP_000019687.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
| AB3436_RS13500 (AB3436_13490) | gcvT | 2717598..2718689 (-) | 1092 | WP_000093349.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| AB3436_RS13505 (AB3436_13495) | - | 2718848..2719372 (-) | 525 | WP_001015117.1 | shikimate kinase | - |
| AB3436_RS13510 (AB3436_13500) | - | 2719362..2719508 (-) | 147 | WP_001789879.1 | hypothetical protein | - |
| AB3436_RS13515 (AB3436_13505) | comGF | 2719605..2720102 (-) | 498 | WP_001789864.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| AB3436_RS13520 (AB3436_13510) | comGE | 2720020..2720319 (-) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| AB3436_RS13525 (AB3436_13515) | comGD | 2720306..2720752 (-) | 447 | WP_001790850.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| AB3436_RS13530 (AB3436_13520) | comGC | 2720730..2721041 (-) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| AB3436_RS13535 (AB3436_13525) | comGB | 2721055..2722125 (-) | 1071 | WP_000775708.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| AB3436_RS13540 (AB3436_13530) | comGA | 2722097..2723071 (-) | 975 | WP_000697228.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| AB3436_RS13545 (AB3436_13535) | - | 2723123..2723746 (-) | 624 | WP_001223008.1 | MBL fold metallo-hydrolase | - |
| AB3436_RS13550 (AB3436_13540) | - | 2723743..2724072 (-) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| AB3436_RS13555 (AB3436_13545) | - | 2724072..2725058 (-) | 987 | WP_000161314.1 | ROK family glucokinase | - |
| AB3436_RS13560 (AB3436_13550) | - | 2725055..2725258 (-) | 204 | WP_000087561.1 | YqgQ family protein | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11093.20 Da Isoelectric Point: 9.9215
>NTDB_id=1025257 AB3436_RS13520 WP_000844413.1 2720020..2720319(-) (comGE) [Staphylococcus aureus strain TUM22721]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=1025257 AB3436_RS13520 WP_000844413.1 2720020..2720319(-) (comGE) [Staphylococcus aureus strain TUM22721]
ATGAAAAGCTATAAGTGTAAAGGTTCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGTTCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
86.842 |
100 |
1 |
| comGE | Staphylococcus aureus N315 |
98.99 |
100 |
0.99 |