Detailed information NTG1024492

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: DQN28_RS07935
• Genome accession: NZ_LS483430
• Coordinates: 1567436..1568704 (+)
• Length: 422 a.a.
• NCBI ID: WP_111686397.1
• Uniprot ID: -
• Organism: Streptococcus pyogenes strain NCTC12044
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1562436..1573704

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQN28_RS07920 (NCTC12044_01572)	-	1562889..1564862 (+)	1974	WP_111686395.1	amidase family protein	-
DQN28_RS07925 (NCTC12044_01573)	pabB	1565047..1566804 (+)	1758	WP_111686396.1	aminodeoxychorismate synthase component I	-
DQN28_RS07930 (NCTC12044_01574)	-	1566837..1567403 (+)	567	WP_012561034.1	aminodeoxychorismate/anthranilate synthase component II	-
DQN28_RS07935 (NCTC12044_01575)	rarA	1567436..1568704 (+)	1269	WP_111686397.1	replication-associated recombination protein A	Machinery gene
DQN28_RS07950 (NCTC12044_01578)	-	1569276..1569977 (+)	702	WP_047236005.1	exotoxin beta-grasp domain-containing protein	-
DQN28_RS07955 (NCTC12044_01579)	-	1570303..1570527 (-)	225	WP_047236006.1	hypothetical protein	-
DQN28_RS07960 (NCTC12044_01580)	-	1570706..1572334 (+)	1629	WP_002993593.1	ABC transporter substrate-binding protein	-
DQN28_RS07965 (NCTC12044_01581)	-	1572447..1573424 (+)	978	WP_111686398.1	ABC transporter permease	-

Sequence

Protein

• Length: 422 a.a.
• Molecular weight: 46651.16 Da
• Isoelectric Point: 6.3774

>NTDB_id=1024492 DQN28_RS07935 WP_111686397.1 1567436..1568704(+) (rarA) [Streptococcus pyogenes strain NCTC12044]
MPDHLALRMRPKTISEVIGQKHLVGEGKIIRRMVEANRLSSMILYGPPGIGKTSIASAIAGTTRYAFRTFNATIDSKKRL
QEIAEEAKFSGGLVLLLDEIHRLDKPKQDFLLPLLENGTIIMIGATTENPFFSVTPAIRSRVQIFELEPLSNEDIKTAIQ
LAISDKERGFPFLVTIDDEALDFIVTATNGDLRSAYNSLDLAVMSTSPNEDSSRHISLETMENSLQRSYITMDKNGDGHY
DVLSALQKAIRGSDVNASLHYAARLVEAGDLPSLARRLTIIAYEDIGLANPDAQVHTVTALDAAQRIGFPEARILIANVV
IDLALSPKSNSAYLAMDAALADLRTSGNLPIPRHLRDGHYAGSKDLGNAKDYLYPHAYPEKWVKQQYLPDKLVGHHYFEA
NETGKYERALGSNKERIDKLLD

Nucleotide

• Length: 1269 bp

>NTDB_id=1024492 DQN28_RS07935 WP_111686397.1 1567436..1568704(+) (rarA) [Streptococcus pyogenes strain NCTC12044]
ATGCCTGATCATTTAGCGCTCAGAATGCGCCCCAAAACCATTTCAGAGGTCATCGGACAAAAACACCTTGTTGGCGAAGG
CAAAATCATCCGTCGCATGGTGGAAGCAAATAGACTATCGTCCATGATCCTCTATGGCCCTCCAGGAATCGGTAAAACTT
CCATTGCTTCTGCTATTGCTGGTACTACTAGATATGCCTTTCGGACCTTTAATGCCACCATTGACAGCAAAAAACGTCTC
CAAGAAATTGCGGAAGAAGCTAAATTTTCTGGTGGCTTGGTATTATTACTAGACGAGATTCATCGCCTTGACAAGCCAAA
ACAAGATTTTCTTTTACCTTTACTTGAGAACGGCACCATTATCATGATTGGCGCAACCACTGAGAACCCCTTCTTTTCAG
TGACCCCCGCTATCAGAAGCAGGGTCCAGATTTTTGAATTGGAACCACTTTCTAACGAGGATATTAAAACAGCCATTCAG
CTAGCAATTTCCGACAAAGAACGGGGATTTCCTTTTTTAGTGACAATTGATGATGAGGCGCTAGATTTCATTGTTACCGC
CACAAATGGAGACCTACGATCTGCTTATAATTCCTTGGATCTAGCAGTCATGTCTACTTCTCCTAATGAAGATAGTAGCC
GTCATATTAGTCTAGAGACAATGGAAAATAGTCTGCAGCGTAGTTATATTACCATGGATAAAAACGGGGACGGGCATTAT
GATGTTTTATCTGCCTTACAAAAAGCTATTCGCGGCTCCGATGTCAATGCCAGCCTGCACTACGCCGCTCGTTTAGTAGA
AGCTGGAGACTTGCCTAGTTTAGCAAGACGATTGACCATTATTGCTTACGAAGATATTGGCTTAGCCAACCCTGACGCCC
AAGTTCATACCGTCACCGCACTAGATGCCGCTCAACGCATTGGTTTTCCAGAAGCTCGTATTCTTATCGCTAACGTGGTC
ATTGATTTGGCTCTATCACCTAAATCCAATTCAGCTTATTTAGCTATGGATGCAGCTTTAGCTGATTTGAGAACATCAGG
TAACCTCCCCATTCCAAGGCATCTTAGAGACGGGCATTACGCTGGCAGCAAGGACCTAGGCAATGCCAAAGATTACCTCT
ACCCACACGCCTACCCTGAAAAATGGGTCAAACAACAATACCTACCAGATAAATTAGTAGGACATCATTATTTTGAAGCC
AATGAAACCGGTAAATACGAACGCGCACTTGGTTCAAATAAAGAGCGTATTGATAAGCTCTTAGACTGA

Domains

Predicted by InterProScan.

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-415)

• ATPase family associated with various cellular activities (AAA) (AAA) (42-144)

• AAA C-terminal domain (AAA_assoc_2) (174-251)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	59.33	99.052	0.588