Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | AB3L01_RS01615 | Genome accession | NZ_CP162145 |
| Coordinates | 349080..349505 (+) | Length | 141 a.a. |
| NCBI ID | WP_000788336.1 | Uniprot ID | A0A0J0ZME6 |
| Organism | Acinetobacter baumannii strain SIMBA089 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 344080..354505
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AB3L01_RS01605 (AB3L01_01605) | pilY1 | 344736..348590 (+) | 3855 | WP_000768943.1 | VWA domain-containing protein | Machinery gene |
| AB3L01_RS01610 (AB3L01_01610) | pilY2 | 348601..349083 (+) | 483 | WP_001046489.1 | type IV pilin protein | Machinery gene |
| AB3L01_RS01615 (AB3L01_01615) | pilE | 349080..349505 (+) | 426 | WP_000788336.1 | type IV pilin protein | Machinery gene |
| AB3L01_RS01620 (AB3L01_01620) | rpsP | 349652..349903 (+) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| AB3L01_RS01625 (AB3L01_01625) | rimM | 349923..350471 (+) | 549 | WP_000189236.1 | ribosome maturation factor RimM | - |
| AB3L01_RS01630 (AB3L01_01630) | trmD | 350517..351257 (+) | 741 | WP_000464595.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| AB3L01_RS01635 (AB3L01_01635) | rplS | 351465..351833 (+) | 369 | WP_000014562.1 | 50S ribosomal protein L19 | - |
| AB3L01_RS01640 (AB3L01_01640) | - | 351885..352826 (-) | 942 | WP_085916958.1 | triacylglycerol lipase | - |
| AB3L01_RS01645 (AB3L01_01645) | - | 352941..353972 (-) | 1032 | WP_001189459.1 | lipase secretion chaperone | - |
Sequence
Protein
Download Length: 141 a.a. Molecular weight: 15175.41 Da Isoelectric Point: 7.8144
>NTDB_id=1024231 AB3L01_RS01615 WP_000788336.1 349080..349505(+) (pilE) [Acinetobacter baumannii strain SIMBA089]
MKNGFSLIEIMVVVAIVAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESQKIVNNRYPSDATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTAIPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
MKNGFSLIEIMVVVAIVAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESQKIVNNRYPSDATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTAIPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
Nucleotide
Download Length: 426 bp
>NTDB_id=1024231 AB3L01_RS01615 WP_000788336.1 349080..349505(+) (pilE) [Acinetobacter baumannii strain SIMBA089]
GTGAAGAATGGTTTTTCTTTAATTGAAATTATGGTCGTGGTAGCAATAGTTGCAATTTTAGCGGCTATAGCCACCCCTTC
ATATTTACAATATTTGCGTAAAGGACATCGTACTGCTGTTCAATCCGAAATGATGAATATTGCGCAGACTTTAGAGTCTC
AAAAAATAGTAAATAACCGTTATCCTTCGGATGCAACTATACAATCAATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTAAATGATTCAACTTGGGTACTTACTGCAATACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAGGGTGCCACAGTTTGTGCACTAT
CTGCTTCATCGAGTTGGACCGAGTAA
GTGAAGAATGGTTTTTCTTTAATTGAAATTATGGTCGTGGTAGCAATAGTTGCAATTTTAGCGGCTATAGCCACCCCTTC
ATATTTACAATATTTGCGTAAAGGACATCGTACTGCTGTTCAATCCGAAATGATGAATATTGCGCAGACTTTAGAGTCTC
AAAAAATAGTAAATAACCGTTATCCTTCGGATGCAACTATACAATCAATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTAAATGATTCAACTTGGGTACTTACTGCAATACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAGGGTGCCACAGTTTGTGCACTAT
CTGCTTCATCGAGTTGGACCGAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Acinetobacter baumannii D1279779 |
90.071 |
100 |
0.901 |
| comF | Acinetobacter baylyi ADP1 |
49.286 |
99.291 |
0.489 |