Detailed information NTG1023631

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: AB2J53_RS19950
• Genome accession: NZ_CP162020
• Coordinates: 3913227..3915653 (-)
• Length: 808 a.a.
• NCBI ID: WP_368297249.1
• Uniprot ID: -
• Organism: Cytobacillus firmus strain A4
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 3908227..3920653

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB2J53_RS19925 (AB2J53_19925)	-	3910809..3911897 (-)	1089	WP_163143568.1	AI-2E family transporter	-
AB2J53_RS19930 (AB2J53_19930)	-	3912020..3912154 (-)	135	WP_081757307.1	YrzQ family protein	-
AB2J53_RS19935 (AB2J53_19935)	-	3912180..3912371 (-)	192	WP_035331236.1	hypothetical protein	-
AB2J53_RS19940 (AB2J53_19940)	-	3912387..3912857 (-)	471	WP_163143571.1	PRC-barrel domain-containing protein	-
AB2J53_RS19945 (AB2J53_19945)	-	3912979..3913128 (-)	150	WP_197087702.1	hypothetical protein	-
AB2J53_RS19950 (AB2J53_19950)	recD2	3913227..3915653 (-)	2427	WP_368297249.1	ATP-dependent RecD-like DNA helicase	Machinery gene
AB2J53_RS19955 (AB2J53_19955)	-	3915680..3916345 (-)	666	WP_222497696.1	tetratricopeptide repeat protein	-
AB2J53_RS19960 (AB2J53_19960)	mnmA	3916462..3917577 (-)	1116	WP_283913496.1	tRNA 2-thiouridine(34) synthase MnmA	-
AB2J53_RS19965 (AB2J53_19965)	-	3917637..3918779 (-)	1143	WP_368297251.1	cysteine desulfurase family protein	-
AB2J53_RS19970 (AB2J53_19970)	-	3918847..3919266 (-)	420	WP_009333072.1	Rrf2 family transcriptional regulator	-
AB2J53_RS19975 (AB2J53_19975)	-	3919266..3919952 (-)	687	WP_368297253.1	YitT family protein	-

Sequence

Protein

• Length: 808 a.a.
• Molecular weight: 91325.40 Da
• Isoelectric Point: 4.9434

>NTDB_id=1023631 AB2J53_RS19950 WP_368297249.1 3913227..3915653(-) (recD2) [Cytobacillus firmus strain A4]
MEKQDSMDLFAEQGKFIKGRHLVTIFHNEQNLYTVVRIRVDETNDSYDEKEAVITGYLPKMHEHETYIFYGEFKDHPKFG
IQFHASHYRKDLPQTKQGVANYLSSELFKGIGKKTAEQIVETLGEDAITRILNQPSLLDNVPKLSPEKAKLLYDTLMEHQ
GLEQAMIALNQYGFGPQLSMRIYQVYKEMTIEVVQNNPYKLVEDIEGVGFGRADELGYQIGISGNHPDRLKAACLYILET
ESMQAGHVYIEAKPLLQSVKKLLEENKRDLIEYKDISNELIKLEEEGKIMAEGQKIFLPSLYFSEKGLVTNIKRILKQTQ
YDEQFPESEFLLALGNLEERLGVQYAPTQKEAIQTALMSPMLILTGGPGTGKTTVIKGIVELYAELHGCSLELKDYKKEE
PFPFLLAAPTGRAAKRMAESTGLPAVTIHRLLGWNGSEGFDRHEESPLEGRILIVDETSMVDVWLANQLFKALPENMQVI
LVGDEDQLPSVGPGQVLKDLLRSERIPTVRLTDIYRQAEGSSIIELAHEMKKGKLPANITAQQSDRSFIKCQPGQIADVV
EKVVLNAKKKGYSSKDIQVLAPMYRGPAGIDRLNEILQEILNPNPDGSRKELSFGDVKYRIGDKVLQLVNQPENNVFNGD
MGEIVSIFYAKENTEKQDMIVVSFDGAEATYTRQDLNQITHAYCCSVHKSQGSEFPIVIMPVVKSYYRMLRRNLLYTAIT
RSRQFLILCGEEDALKMGVERADEQARLTTLSEKLRDAILFNDETGLEDTTEASLTETLSLEEKLLQSDPMIGMGNITPY
DFLEKEYS

Nucleotide

• Length: 2427 bp

>NTDB_id=1023631 AB2J53_RS19950 WP_368297249.1 3913227..3915653(-) (recD2) [Cytobacillus firmus strain A4]
ATGGAAAAACAGGATTCCATGGATCTTTTTGCCGAACAGGGGAAGTTCATAAAGGGCAGACATCTGGTCACAATCTTTCA
TAATGAGCAAAACTTATATACGGTTGTGCGCATTAGGGTTGATGAAACGAATGACTCTTATGATGAGAAAGAAGCTGTCA
TTACCGGCTATCTTCCAAAGATGCATGAGCATGAAACCTATATTTTTTATGGTGAATTCAAAGACCACCCTAAGTTCGGC
ATCCAATTCCATGCAAGCCATTACAGGAAAGATCTTCCCCAGACGAAACAAGGCGTAGCCAATTATTTATCAAGTGAATT
ATTTAAAGGGATTGGCAAGAAAACAGCCGAGCAAATCGTGGAGACACTTGGAGAAGATGCGATTACTCGTATTCTAAACC
AGCCGTCCCTCCTCGATAATGTTCCCAAGCTGTCACCTGAAAAAGCTAAATTGCTTTACGATACGCTGATGGAACACCAG
GGCCTTGAGCAAGCCATGATCGCTCTTAATCAATATGGGTTTGGACCGCAGCTTTCCATGAGAATTTATCAGGTGTATAA
AGAAATGACGATTGAAGTCGTTCAAAATAACCCTTATAAGCTGGTTGAGGATATAGAGGGGGTCGGCTTTGGCCGTGCTG
ACGAGCTGGGATATCAAATTGGCATATCAGGCAATCATCCTGACCGTCTTAAAGCTGCCTGCCTCTACATACTTGAAACG
GAGAGTATGCAGGCAGGCCATGTTTATATTGAAGCAAAGCCTCTTCTGCAAAGTGTGAAGAAGCTGCTGGAAGAAAATAA
ACGTGATTTGATTGAATACAAGGATATATCCAATGAACTGATTAAGCTTGAAGAGGAAGGGAAGATCATGGCTGAAGGCC
AGAAAATTTTCCTTCCATCTCTTTATTTTTCCGAAAAAGGACTAGTAACCAATATTAAGCGGATCCTCAAGCAAACCCAG
TATGACGAACAGTTTCCGGAGTCGGAATTTCTTTTGGCCCTTGGAAATTTGGAGGAGCGCCTGGGTGTCCAATATGCCCC
AACTCAAAAGGAAGCCATTCAAACAGCTCTTATGTCTCCTATGCTGATATTGACCGGCGGGCCGGGGACAGGAAAAACAA
CCGTTATTAAGGGGATTGTTGAGTTATATGCCGAGCTGCATGGCTGCTCCCTGGAACTGAAAGATTATAAAAAGGAAGAG
CCCTTTCCCTTCCTGCTGGCAGCCCCTACAGGAAGGGCTGCAAAACGGATGGCGGAATCAACAGGGCTGCCAGCTGTAAC
GATTCACCGTCTTCTTGGATGGAATGGGTCTGAAGGATTTGACCGGCACGAGGAGAGTCCGCTGGAAGGCAGGATATTAA
TTGTAGATGAAACATCAATGGTTGATGTTTGGCTTGCAAATCAGCTTTTCAAGGCTCTTCCTGAAAATATGCAAGTGATA
CTGGTTGGTGATGAAGACCAGCTGCCTTCAGTGGGTCCCGGCCAGGTTTTGAAGGATCTTCTGCGCTCAGAACGCATTCC
AACTGTCCGTTTAACAGATATATACAGGCAGGCTGAAGGGTCTTCAATTATTGAACTGGCACATGAAATGAAAAAAGGCA
AGCTTCCTGCGAACATCACTGCGCAGCAATCGGACCGTTCATTTATCAAATGCCAGCCGGGCCAAATTGCTGATGTTGTT
GAAAAGGTTGTCCTTAATGCCAAAAAGAAAGGTTATTCATCTAAAGATATTCAGGTGCTTGCCCCAATGTACCGCGGACC
TGCAGGCATCGACAGACTAAACGAAATACTGCAGGAAATACTGAATCCAAATCCCGATGGATCGAGGAAAGAGCTGTCCT
TTGGTGATGTGAAATACAGAATTGGCGATAAAGTCCTTCAGCTTGTCAACCAGCCTGAGAACAATGTTTTTAACGGGGAT
ATGGGTGAGATTGTTTCTATTTTTTACGCAAAGGAAAATACGGAAAAACAGGATATGATTGTCGTATCCTTTGATGGTGC
GGAAGCTACATACACAAGGCAGGATTTGAACCAGATCACTCATGCCTACTGCTGCTCTGTCCATAAATCGCAGGGAAGTG
AATTTCCGATTGTCATAATGCCTGTTGTTAAAAGCTATTACAGGATGCTGAGAAGGAATCTCCTTTATACCGCCATTACC
CGCAGCAGACAATTTTTGATATTGTGCGGCGAAGAAGATGCATTAAAAATGGGTGTGGAACGTGCGGATGAACAGGCCCG
CTTGACCACTCTTTCTGAAAAGCTGAGAGATGCAATCCTGTTTAATGATGAAACAGGGCTTGAAGATACAACTGAGGCTT
CTCTTACGGAAACACTTTCTCTCGAAGAAAAGCTTCTCCAATCCGATCCAATGATAGGAATGGGAAATATAACACCGTAT
GATTTTTTGGAAAAAGAATATAGCTAA

Domains

Predicted by InterproScan.

• UvrD-like helicase C-terminal domain (UvrD_C_2) (681-729)

• AAA domain (AAA_30) (345-552)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (593-664)

• Helix-hairpin-helix containing domain (HHH_RecD2) (158-249)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	61.857	98.639	0.61