Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | AB3G49_RS16270 | Genome accession | NZ_CP161986 |
| Coordinates | 3404459..3404884 (-) | Length | 141 a.a. |
| NCBI ID | WP_000788337.1 | Uniprot ID | A0A009SG52 |
| Organism | Acinetobacter baumannii strain SIMBA003 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3399459..3409884
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AB3G49_RS16240 (AB3G49_16240) | - | 3399989..3401023 (+) | 1035 | WP_001189446.1 | lipase secretion chaperone | - |
| AB3G49_RS16245 (AB3G49_16245) | - | 3401138..3402079 (+) | 942 | WP_085916958.1 | triacylglycerol lipase | - |
| AB3G49_RS16250 (AB3G49_16250) | rplS | 3402131..3402499 (-) | 369 | WP_000014562.1 | 50S ribosomal protein L19 | - |
| AB3G49_RS16255 (AB3G49_16255) | trmD | 3402707..3403447 (-) | 741 | WP_000464598.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| AB3G49_RS16260 (AB3G49_16260) | rimM | 3403493..3404041 (-) | 549 | WP_000189236.1 | ribosome maturation factor RimM | - |
| AB3G49_RS16265 (AB3G49_16265) | rpsP | 3404061..3404312 (-) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| AB3G49_RS16270 (AB3G49_16270) | pilE | 3404459..3404884 (-) | 426 | WP_000788337.1 | type IV pilin protein | Machinery gene |
| AB3G49_RS16275 (AB3G49_16275) | pilY2 | 3404881..3405363 (-) | 483 | WP_001046421.1 | type IV pilin protein | Machinery gene |
| AB3G49_RS16280 (AB3G49_16280) | pilY1 | 3405376..3409230 (-) | 3855 | WP_000768944.1 | PilC/PilY family type IV pilus protein | Machinery gene |
Sequence
Protein
Download Length: 141 a.a. Molecular weight: 15163.36 Da Isoelectric Point: 7.8144
>NTDB_id=1023205 AB3G49_RS16270 WP_000788337.1 3404459..3404884(-) (pilE) [Acinetobacter baumannii strain SIMBA003]
MKNGFSLIEIMVVVAIVAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESQKIVNNRYPSDATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTATPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
MKNGFSLIEIMVVVAIVAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESQKIVNNRYPSDATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTATPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
Nucleotide
Download Length: 426 bp
>NTDB_id=1023205 AB3G49_RS16270 WP_000788337.1 3404459..3404884(-) (pilE) [Acinetobacter baumannii strain SIMBA003]
GTGAAGAATGGTTTTTCTTTAATTGAAATTATGGTTGTGGTAGCAATAGTTGCAATTTTAGCGGCTATAGCCACCCCTTC
ATATTTACAATATTTGCGTAAAGGACATCGTACTGCTGTTCAATCCGAAATGATGAATATTGCGCAGACATTAGAATCTC
AAAAAATAGTAAATAACCGTTATCCTTCGGATGCGACCATACAGTCGATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTAAATGATTCAACTTGGGTACTTACTGCAACACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAAGGTGCCACAGTTTGTGCACTAT
CTGCTTCATCGAGTTGGACCGAGTAA
GTGAAGAATGGTTTTTCTTTAATTGAAATTATGGTTGTGGTAGCAATAGTTGCAATTTTAGCGGCTATAGCCACCCCTTC
ATATTTACAATATTTGCGTAAAGGACATCGTACTGCTGTTCAATCCGAAATGATGAATATTGCGCAGACATTAGAATCTC
AAAAAATAGTAAATAACCGTTATCCTTCGGATGCGACCATACAGTCGATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTAAATGATTCAACTTGGGTACTTACTGCAACACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAAGGTGCCACAGTTTGTGCACTAT
CTGCTTCATCGAGTTGGACCGAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Acinetobacter baumannii D1279779 |
90.78 |
100 |
0.908 |
| comF | Acinetobacter baylyi ADP1 |
50 |
99.291 |
0.496 |