Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   SMUFR_RS04990 Genome accession   NZ_CP007016
Coordinates   1021531..1023276 (-) Length   581 a.a.
NCBI ID   WP_002262262.1    Uniprot ID   Q8DU71
Organism   Streptococcus mutans UA159-FR     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1016531..1028276
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SMUFR_RS04970 (SMUFR_0937) - 1017725..1018411 (+) 687 WP_002262266.1 phosphopantothenate--cysteine ligase -
  SMUFR_RS04975 (SMUFR_0938) coaC 1018404..1018943 (+) 540 WP_002262265.1 phosphopantothenoylcysteine decarboxylase -
  SMUFR_RS04980 (SMUFR_0939) - 1019018..1019590 (+) 573 WP_002262264.1 ECF transporter S component -
  SMUFR_RS04985 (SMUFR_0940) - 1019685..1021400 (+) 1716 WP_002262263.1 phospho-sugar mutase -
  SMUFR_RS04990 (SMUFR_0941) rcrQ 1021531..1023276 (-) 1746 WP_002262262.1 ABC transporter ATP-binding protein Regulator
  SMUFR_RS04995 (SMUFR_0942) - 1023273..1025006 (-) 1734 WP_002352279.1 ABC transporter ATP-binding protein -
  SMUFR_RS05000 (SMUFR_0943) - 1025016..1025630 (-) 615 WP_002262260.1 lysozyme family protein -
  SMUFR_RS05005 (SMUFR_0944) - 1025632..1026609 (-) 978 WP_002262259.1 nucleoid-associated protein -
  SMUFR_RS05010 (SMUFR_0945) glyA 1026606..1027868 (-) 1263 WP_002262258.1 serine hydroxymethyltransferase -

Sequence

Protein


Download         Length: 581 a.a.        Molecular weight: 65370.04 Da        Isoelectric Point: 9.4261

>NTDB_id=102159 SMUFR_RS04990 WP_002262262.1 1021531..1023276(-) (rcrQ) [Streptococcus mutans UA159-FR]
MKARNNKNTLKRLTADFLKQRILVFLALLGTLIQVSLTVYLPVLIGRAVDAVLAKNVQKILPTILISMILVVAFNTIIQW
INPLIYNRLVFTYSQELRQNIIEKLYRLPLSYLDKHSSGDLVSRITTDVEQLSNGLLMVFNQFFVGILTILLTIITMAKL
DFFMMVLVLALTPLSLFVARFIAQRSYHLYQRQTRARGAFTQHIEESLRQESLIQSFNAQDQFIHTFDHLNSKYAKYSQG
AIFYSSTVNPATRFINALIYALLAGIGALRIMNGNFTVGQLTTFLNYVIQYTKPFNDISAVLSELQSALACAERLYMILD
ERDAKDDGKKELVSESVKGAITFDKISFGYDEKQTLIKNLSVNIPQGSKVAIVGPTGAGKSTLINLLMRFYDLREGQILL
DGQAITDYSKASYRQQIGMVLQETWLKTATVLENIAFGYPEASREQVIAAAKAANADFFIKQLPQGYDTFLADAGESLSQ
GQRQLLTIARIFVHIPKILILDEATSSIDTRTEILVQEAFEKLMKGRTSFIIAHRLSTIQSADLILVMVDGNIVEQGNHK
DLMQKKGVYYQMQTAQDSLES

Nucleotide


Download         Length: 1746 bp        

>NTDB_id=102159 SMUFR_RS04990 WP_002262262.1 1021531..1023276(-) (rcrQ) [Streptococcus mutans UA159-FR]
ATGAAAGCTAGAAATAATAAAAATACCTTAAAGCGCTTGACTGCTGACTTTCTTAAGCAGAGAATTTTGGTTTTTCTTGC
CTTATTGGGTACTTTGATTCAGGTCAGCCTAACGGTTTATCTCCCAGTTCTAATTGGGCGAGCAGTTGATGCTGTTCTTG
CTAAAAATGTCCAGAAAATCTTACCGACAATCTTGATTAGCATGATTCTTGTTGTTGCCTTTAATACCATTATCCAATGG
ATTAATCCCTTGATTTACAATCGTTTGGTTTTCACTTATAGCCAGGAGCTTCGGCAGAATATCATTGAAAAACTTTATCG
CCTCCCTTTATCTTATTTGGATAAGCATTCTTCAGGTGATTTAGTCAGTCGTATAACAACGGATGTTGAACAATTATCCA
ACGGACTTTTGATGGTTTTTAATCAGTTTTTCGTAGGTATTTTGACTATTTTGTTAACCATCATAACAATGGCGAAGCTA
GACTTTTTTATGATGGTTTTGGTACTGGCCTTAACACCACTTTCCTTATTTGTTGCTCGTTTTATTGCTCAAAGGAGTTA
TCATCTTTATCAAAGACAAACCAGAGCCAGAGGGGCGTTTACTCAACATATTGAAGAGAGTCTTCGTCAGGAAAGTTTGA
TTCAAAGTTTCAATGCTCAAGATCAATTTATTCACACTTTTGATCATCTAAATAGCAAATATGCTAAGTATTCACAAGGG
GCTATTTTCTATTCATCCACAGTCAACCCTGCGACTCGTTTTATCAATGCCTTAATTTATGCGCTCTTAGCTGGTATCGG
AGCATTACGCATTATGAATGGGAATTTTACTGTGGGGCAATTGACCACTTTCTTGAATTATGTCATTCAATATACCAAAC
CCTTCAATGACATTTCAGCCGTTCTATCTGAATTACAAAGTGCTTTAGCATGTGCAGAACGTCTTTATATGATTCTCGAT
GAAAGAGATGCTAAGGATGATGGCAAGAAAGAATTAGTCAGTGAATCTGTTAAAGGTGCTATTACCTTTGATAAGATTAG
TTTTGGTTATGATGAGAAACAAACTCTGATTAAGAATTTGTCTGTCAATATTCCACAAGGTTCCAAAGTGGCTATCGTTG
GTCCTACAGGGGCTGGAAAATCAACTCTCATTAATTTGCTGATGCGATTTTATGATTTGCGAGAAGGGCAAATACTGCTA
GATGGGCAAGCAATCACTGACTATAGTAAAGCTTCTTATCGTCAGCAGATTGGTATGGTCTTACAAGAAACTTGGCTGAA
AACGGCTACTGTTTTGGAAAATATTGCCTTTGGTTATCCTGAAGCTAGCCGCGAGCAAGTGATTGCAGCGGCAAAAGCAG
CTAATGCCGACTTTTTTATAAAACAACTTCCTCAAGGTTACGATACTTTTTTGGCCGATGCAGGAGAATCCCTATCACAA
GGGCAAAGGCAATTGTTAACGATAGCACGAATTTTTGTTCATATTCCTAAAATATTAATCTTGGATGAAGCAACTTCCTC
CATTGATACACGAACAGAAATCTTGGTCCAAGAAGCATTTGAAAAGCTTATGAAAGGACGGACCAGCTTTATTATTGCAC
ATAGATTGTCAACTATTCAAAGCGCAGACCTTATCTTAGTTATGGTAGATGGCAATATTGTTGAACAAGGAAATCATAAA
GACTTGATGCAGAAAAAAGGTGTCTATTATCAAATGCAGACAGCACAGGATAGCCTTGAAAGCTAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(358-506)

ABC transporter transmembrane region (ABC_membrane)

(24-294)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q8DU71

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

38.567

100

0.389

Multiple sequence alignment