Detailed information NTG1020933

Bioinformatically predicted

Overview

• Name: endA
• Type: Machinery gene
• Locus tag: ABZ559_RS06135
• Genome accession: NZ_CP160400
• Coordinates: 1185647..1186510 (+)
• Length: 287 a.a.
• NCBI ID: WP_367007543.1
• Uniprot ID: -
• Organism: Streptococcus sp. ZY19097
• Function: cleavage of dsDNA into ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1180647..1191510

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABZ559_RS06105 (ABZ559_06105)	rpoD	1181340..1182449 (+)	1110	WP_018376600.1	RNA polymerase sigma factor RpoD	-
ABZ559_RS06110 (ABZ559_06110)	-	1182464..1182802 (+)	339	WP_018376599.1	metal-sulfur cluster assembly factor	-
ABZ559_RS06115 (ABZ559_06115)	rfbD	1182875..1183726 (+)	852	WP_018376598.1	dTDP-4-dehydrorhamnose reductase	-
ABZ559_RS06120 (ABZ559_06120)	-	1183844..1184080 (+)	237	WP_367007541.1	DUF1146 family protein	-
ABZ559_RS06125 (ABZ559_06125)	murA	1184145..1185416 (+)	1272	WP_367007542.1	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	-
ABZ559_RS06130 (ABZ559_06130)	-	1185419..1185607 (+)	189	WP_018376595.1	DNA-directed RNA polymerase subunit beta	-
ABZ559_RS06135 (ABZ559_06135)	endA	1185647..1186510 (+)	864	WP_367007543.1	DNA/RNA non-specific endonuclease	Machinery gene
ABZ559_RS06140 (ABZ559_06140)	-	1186513..1186995 (+)	483	WP_018376593.1	GNAT family N-acetyltransferase	-
ABZ559_RS06145 (ABZ559_06145)	-	1187080..1187250 (+)	171	WP_018376592.1	hypothetical protein	-
ABZ559_RS06150 (ABZ559_06150)	-	1187531..1188346 (+)	816	WP_018376161.1	transporter substrate-binding domain-containing protein	-
ABZ559_RS06155 (ABZ559_06155)	-	1188881..1189996 (+)	1116	WP_367007544.1	aminotransferase	-
ABZ559_RS06160 (ABZ559_06160)	-	1190075..1190881 (+)	807	WP_367007545.1	transporter substrate-binding domain-containing protein	-

Sequence

Protein

• Length: 287 a.a.
• Molecular weight: 31350.16 Da
• Isoelectric Point: 9.7269

>NTDB_id=1020933 ABZ559_RS06135 WP_367007543.1 1185647..1186510(+) (endA) [Streptococcus sp. ZY19097]
MRKKRQKSIISVLVFLVTVITIAVVNSGAIPDKSPLKQVAQFVLKTDNETSQAGKSVDTSGRPDQVLAESVLTAEVKNQL
GKKIEWNQAGAFIINNNQTSLKADVASVPYATNKTKYVRGEKVPTVANALLSKATRQYESREKTGNGGSSWRPAGWHQLT
DLTGDYDHAVDRGHLLAYSLVGGLKGFDASMSNSDNIATQAAWANQANSQESTGQNYYETLVRKALDNKKRVRYRVTLIY
QGDNILASGVHLEAKSSDGSLEFNVFVPNVQNGLVFDYYSGEVKESS

Nucleotide

• Length: 864 bp

>NTDB_id=1020933 ABZ559_RS06135 WP_367007543.1 1185647..1186510(+) (endA) [Streptococcus sp. ZY19097]
ATGAGAAAGAAAAGACAAAAATCAATTATTTCAGTCCTAGTTTTCCTAGTGACTGTAATTACCATCGCGGTTGTTAATAG
CGGAGCTATTCCTGACAAGTCTCCTTTAAAGCAAGTGGCACAATTCGTTTTAAAAACTGATAATGAAACTTCGCAAGCAG
GCAAATCGGTTGATACAAGCGGGCGACCGGATCAAGTGTTAGCAGAGTCTGTTCTTACGGCGGAGGTCAAAAATCAGCTT
GGGAAGAAAATAGAATGGAATCAAGCAGGCGCTTTTATTATCAATAATAATCAGACGAGTTTAAAAGCAGATGTTGCAAG
CGTACCATATGCTACCAATAAAACAAAATATGTGAGAGGGGAAAAAGTGCCGACAGTGGCTAATGCTCTTTTATCGAAAG
CTACACGGCAATATGAAAGCCGTGAAAAGACTGGTAACGGAGGAAGTAGTTGGCGACCAGCAGGTTGGCATCAATTGACT
GATTTAACAGGCGATTATGATCATGCAGTGGATCGTGGACACCTTTTAGCCTATTCCTTGGTAGGAGGCTTGAAGGGATT
TGATGCTTCAATGAGTAATTCAGATAATATTGCTACGCAAGCTGCCTGGGCCAATCAAGCAAATTCTCAAGAGTCAACTG
GACAAAATTACTATGAAACACTTGTTAGAAAAGCTCTAGATAATAAAAAACGTGTTCGCTATCGCGTGACTTTGATTTAT
CAGGGAGATAACATTCTAGCAAGCGGGGTGCATCTTGAAGCTAAATCATCAGATGGGAGTTTAGAATTTAATGTCTTTGT
ACCCAATGTTCAAAATGGTTTAGTTTTTGATTATTATTCAGGGGAAGTCAAAGAAAGTAGCTGA

Domains

Predicted by InterproScan.

• DNA/RNA non-specific endonuclease (Endonuclease_NS) (90-245)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
endA	Streptococcus pneumoniae Rx1	65.766	77.352	0.509
endA	Streptococcus pneumoniae D39	65.766	77.352	0.509
endA	Streptococcus pneumoniae R6	65.766	77.352	0.509
endA	Streptococcus pneumoniae TIGR4	65.766	77.352	0.509