Detailed information NTG1020350

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: AB0R69_RS17860
• Genome accession: NZ_CP160234
• Coordinates: 3465456..3467840 (-)
• Length: 794 a.a.
• NCBI ID: WP_211062957.1
• Uniprot ID: -
• Organism: Bacillus pumilus strain JJ1368
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 3460456..3472840

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB0R69_RS17825 (AB0R69_17835)	-	3461325..3462053 (+)	729	WP_211062961.1	amino acid ABC transporter ATP-binding protein	-
AB0R69_RS17830 (AB0R69_17840)	-	3462067..3462876 (+)	810	WP_211062960.1	transporter substrate-binding domain-containing protein	-
AB0R69_RS17835 (AB0R69_17845)	-	3462953..3463606 (+)	654	WP_119125178.1	amino acid ABC transporter permease	-
AB0R69_RS17840 (AB0R69_17850)	-	3463622..3464272 (+)	651	WP_211062959.1	amino acid ABC transporter permease	-
AB0R69_RS17845 (AB0R69_17855)	-	3464506..3464637 (-)	132	WP_003216198.1	YrzQ family protein	-
AB0R69_RS17850 (AB0R69_17860)	-	3464658..3464849 (-)	192	WP_211062958.1	hypothetical protein	-
AB0R69_RS17855 (AB0R69_17865)	-	3464863..3465321 (-)	459	WP_249407355.1	prc-barrel domain-containing protein	-
AB0R69_RS17860 (AB0R69_17870)	recD2	3465456..3467840 (-)	2385	WP_211062957.1	ATP-dependent RecD-like DNA helicase	Machinery gene
AB0R69_RS17865 (AB0R69_17875)	-	3467860..3468513 (-)	654	WP_211062956.1	tetratricopeptide repeat protein	-
AB0R69_RS17870 (AB0R69_17880)	mnmA	3468574..3469692 (-)	1119	WP_003216305.1	tRNA 2-thiouridine(34) synthase MnmA	-
AB0R69_RS17875 (AB0R69_17885)	-	3469788..3470930 (-)	1143	WP_211062955.1	cysteine desulfurase family protein	-
AB0R69_RS17880 (AB0R69_17890)	-	3470949..3471368 (-)	420	WP_012010726.1	Rrf2 family transcriptional regulator	-

Sequence

Protein

• Length: 794 a.a.
• Molecular weight: 88979.48 Da
• Isoelectric Point: 5.2109

>NTDB_id=1020350 AB0R69_RS17860 WP_211062957.1 3465456..3467840(-) (recD2) [Bacillus pumilus strain JJ1368]
MQEHPDQMKLEDEPFLKGTVQAVIFHNESNLYSVLKVKVIETSENLEEKTASVTGYFPALHEEETYTFYGKVTSHPKFGE
QFQATHFQKEVPTTKQGIIHYLSSDLFEGIGKKTAEEIVGKLGSETLHKIMRDPAVLYDVPRLSKKKADKLAAALQEHQG
LEQIMISLNQYGFGPQLSMKIYQVYESETLQKIEENPYQLVKDVEGIGFIKADELGARTGISGSDPERIRAALLYTVETA
SLQDGHTYIQTKDLIVETRKLLNQTGNEYKVTEMDVANQIIALGEGKDMIIEDERCYHPSLFYAEQSVAKRIQKIVSQTE
YADQFPESEFLLALGELEERLGVQYAPTQKEAIQKALMSPMLLLTGGPGTGKTTVIKGIVELYSDLHGVSLDPSDYKKDE
SFPFVLAAPTGRAAKRMTESTGLPAVTIHRLLGWNGSEGFSHDDEQPIEGKLVIIDESSMLDIWLANHLFKAIPDHIQVI
MVGDEHQLPSVGPGQVLRDLLASQAVPAVTLTDIYRQADGSSIVELAHDMKNGVLPKDITARSKDRSFIKCSADQMKEVI
EKVVSNAAQKGYSAKDIQVLAPMYKGKAGINELNKMLQHILNPKKPKGREIPFGDVVYRTGDKVLQLVNQPENNIFNGDI
GEIVSIFYAKENTEKEDMAVISFDGNEITFTKKDFHQFTHAYCCSIHKSQGSEFPIVVLPVVRSYYRMLRRNLLYTAITR
SKKFLILCGEESALEWGVKNNEDSLRQTSLTMRLVQTEEIMDAELAALQRELPFSVHDANIGMEGITPFDFMHE

Nucleotide

• Length: 2385 bp

>NTDB_id=1020350 AB0R69_RS17860 WP_211062957.1 3465456..3467840(-) (recD2) [Bacillus pumilus strain JJ1368]
GTGCAGGAACATCCAGATCAAATGAAGCTTGAGGACGAACCGTTTTTAAAGGGGACAGTTCAAGCCGTTATTTTCCATAA
TGAAAGTAATTTATACTCGGTGTTAAAGGTGAAAGTCATTGAAACATCGGAAAACTTAGAGGAAAAAACAGCATCTGTCA
CAGGCTACTTCCCAGCACTTCATGAGGAAGAAACTTACACCTTCTATGGCAAAGTCACAAGCCATCCGAAGTTTGGTGAA
CAGTTTCAGGCGACTCATTTTCAAAAGGAAGTACCAACAACAAAGCAAGGAATAATCCATTATCTTTCAAGTGATTTATT
TGAGGGGATAGGCAAAAAGACAGCGGAAGAAATTGTAGGAAAGCTTGGCAGTGAGACGCTTCATAAAATTATGCGTGACC
CAGCGGTTTTGTATGACGTTCCGCGCTTATCAAAAAAGAAGGCAGATAAGCTGGCTGCAGCGCTCCAGGAGCATCAAGGA
TTGGAACAAATCATGATTAGCCTGAATCAATACGGCTTTGGTCCGCAGCTCAGTATGAAGATTTATCAAGTGTACGAGAG
TGAGACGCTACAGAAGATTGAAGAAAACCCGTATCAACTCGTCAAGGATGTTGAAGGGATCGGATTTATTAAGGCGGATG
AACTTGGCGCTAGAACCGGCATCTCAGGAAGTGACCCAGAGCGAATCCGTGCAGCCTTGCTTTATACAGTGGAGACAGCC
AGTCTTCAGGACGGTCATACGTACATACAAACAAAGGATTTGATCGTTGAAACCCGAAAACTACTCAATCAGACAGGAAA
TGAGTACAAAGTGACGGAAATGGACGTCGCCAATCAGATCATTGCACTTGGCGAAGGGAAAGACATGATCATTGAAGATG
AGCGCTGCTATCATCCGTCCTTATTTTATGCCGAGCAAAGTGTCGCGAAACGTATACAAAAAATCGTCTCCCAAACGGAA
TATGCAGATCAATTTCCTGAATCAGAATTCCTTCTAGCCCTTGGTGAACTAGAGGAACGGCTAGGCGTCCAATATGCGCC
GACACAAAAAGAAGCGATTCAAAAGGCACTCATGTCCCCAATGCTGCTTTTAACAGGCGGACCTGGGACTGGGAAGACAA
CAGTCATTAAAGGGATTGTTGAGCTTTACAGCGATCTTCATGGTGTATCACTTGACCCAAGTGATTATAAAAAGGATGAA
TCCTTCCCATTTGTGCTTGCGGCACCAACTGGACGAGCAGCTAAACGGATGACAGAATCAACAGGGCTTCCAGCTGTGAC
GATTCATCGGCTGCTTGGTTGGAACGGATCAGAGGGATTTTCTCATGATGATGAACAGCCGATTGAAGGAAAGCTTGTCA
TCATTGATGAATCAAGTATGCTAGATATTTGGCTTGCGAATCACTTGTTTAAAGCCATTCCTGACCATATACAAGTGATC
ATGGTGGGGGATGAACATCAGCTTCCGTCTGTCGGACCAGGCCAGGTGTTAAGAGACTTGCTTGCATCACAAGCCGTGCC
AGCTGTTACCCTAACAGATATTTACCGGCAGGCAGACGGCTCCAGCATTGTTGAACTTGCACATGATATGAAAAATGGTG
TCCTACCAAAGGATATTACCGCACGTTCAAAGGATCGATCTTTCATCAAATGCTCAGCTGATCAAATGAAAGAAGTGATT
GAGAAAGTCGTCAGCAATGCTGCTCAAAAAGGCTATTCAGCTAAAGACATTCAAGTGCTTGCGCCCATGTATAAAGGAAA
AGCAGGCATTAATGAGCTCAATAAAATGCTGCAGCACATTTTGAATCCTAAAAAACCAAAAGGTCGAGAAATTCCTTTTG
GTGATGTGGTGTACCGGACTGGTGATAAAGTGCTTCAGCTTGTGAATCAGCCAGAGAACAATATTTTTAACGGAGATATT
GGCGAAATTGTCTCGATTTTTTATGCGAAAGAAAACACAGAAAAAGAAGATATGGCTGTGATCTCCTTTGATGGGAATGA
AATCACTTTTACTAAAAAGGATTTTCATCAATTTACACACGCCTATTGTTGCTCTATCCACAAATCACAAGGCAGTGAAT
TCCCTATCGTGGTACTACCAGTCGTGAGAAGTTACTACAGAATGCTTCGGCGAAATTTGCTGTACACAGCCATTACACGA
AGTAAAAAGTTTTTAATCCTGTGCGGCGAGGAATCAGCACTAGAGTGGGGCGTGAAAAACAATGAGGATTCCCTCAGACA
AACGTCCTTAACGATGCGGCTCGTGCAAACCGAAGAGATTATGGATGCGGAGCTTGCAGCACTTCAAAGAGAACTGCCGT
TTAGCGTGCATGATGCAAATATTGGTATGGAGGGAATCACTCCATTTGATTTTATGCATGAATAA

Domains

Predicted by InterproScan.

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (593-659)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (680-728)

• Helix-hairpin-helix containing domain (HHH_RecD2) (157-248)

• AAA domain (AAA_30) (345-553)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	80.151	100	0.804