Detailed information NTG1020274

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: AB0R75_RS12205
• Genome accession: NZ_CP160232
• Coordinates: 2399517..2401901 (-)
• Length: 794 a.a.
• NCBI ID: WP_211062957.1
• Uniprot ID: -
• Organism: Bacillus pumilus strain JJ1622
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2394517..2406901

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB0R75_RS12170 (AB0R75_12170)	-	2395386..2396114 (+)	729	WP_211062961.1	amino acid ABC transporter ATP-binding protein	-
AB0R75_RS12175 (AB0R75_12175)	-	2396128..2396937 (+)	810	WP_211062960.1	transporter substrate-binding domain-containing protein	-
AB0R75_RS12180 (AB0R75_12180)	-	2397014..2397667 (+)	654	WP_119125178.1	amino acid ABC transporter permease	-
AB0R75_RS12185 (AB0R75_12185)	-	2397683..2398333 (+)	651	WP_211062959.1	amino acid ABC transporter permease	-
AB0R75_RS12190 (AB0R75_12190)	-	2398567..2398698 (-)	132	WP_003216198.1	YrzQ family protein	-
AB0R75_RS12195 (AB0R75_12195)	-	2398719..2398910 (-)	192	WP_211062958.1	hypothetical protein	-
AB0R75_RS12200 (AB0R75_12200)	-	2398924..2399382 (-)	459	WP_249407355.1	prc-barrel domain-containing protein	-
AB0R75_RS12205 (AB0R75_12205)	recD2	2399517..2401901 (-)	2385	WP_211062957.1	ATP-dependent RecD-like DNA helicase	Machinery gene
AB0R75_RS12210 (AB0R75_12210)	-	2401921..2402574 (-)	654	WP_211062956.1	tetratricopeptide repeat protein	-
AB0R75_RS12215 (AB0R75_12215)	mnmA	2402635..2403753 (-)	1119	WP_003216305.1	tRNA 2-thiouridine(34) synthase MnmA	-
AB0R75_RS12220 (AB0R75_12220)	-	2403849..2404991 (-)	1143	WP_211062955.1	cysteine desulfurase family protein	-
AB0R75_RS12225 (AB0R75_12225)	-	2405010..2405429 (-)	420	WP_012010726.1	Rrf2 family transcriptional regulator	-

Sequence

Protein

• Length: 794 a.a.
• Molecular weight: 88979.48 Da
• Isoelectric Point: 5.2109

>NTDB_id=1020274 AB0R75_RS12205 WP_211062957.1 2399517..2401901(-) (recD2) [Bacillus pumilus strain JJ1622]
MQEHPDQMKLEDEPFLKGTVQAVIFHNESNLYSVLKVKVIETSENLEEKTASVTGYFPALHEEETYTFYGKVTSHPKFGE
QFQATHFQKEVPTTKQGIIHYLSSDLFEGIGKKTAEEIVGKLGSETLHKIMRDPAVLYDVPRLSKKKADKLAAALQEHQG
LEQIMISLNQYGFGPQLSMKIYQVYESETLQKIEENPYQLVKDVEGIGFIKADELGARTGISGSDPERIRAALLYTVETA
SLQDGHTYIQTKDLIVETRKLLNQTGNEYKVTEMDVANQIIALGEGKDMIIEDERCYHPSLFYAEQSVAKRIQKIVSQTE
YADQFPESEFLLALGELEERLGVQYAPTQKEAIQKALMSPMLLLTGGPGTGKTTVIKGIVELYSDLHGVSLDPSDYKKDE
SFPFVLAAPTGRAAKRMTESTGLPAVTIHRLLGWNGSEGFSHDDEQPIEGKLVIIDESSMLDIWLANHLFKAIPDHIQVI
MVGDEHQLPSVGPGQVLRDLLASQAVPAVTLTDIYRQADGSSIVELAHDMKNGVLPKDITARSKDRSFIKCSADQMKEVI
EKVVSNAAQKGYSAKDIQVLAPMYKGKAGINELNKMLQHILNPKKPKGREIPFGDVVYRTGDKVLQLVNQPENNIFNGDI
GEIVSIFYAKENTEKEDMAVISFDGNEITFTKKDFHQFTHAYCCSIHKSQGSEFPIVVLPVVRSYYRMLRRNLLYTAITR
SKKFLILCGEESALEWGVKNNEDSLRQTSLTMRLVQTEEIMDAELAALQRELPFSVHDANIGMEGITPFDFMHE

Nucleotide

• Length: 2385 bp

>NTDB_id=1020274 AB0R75_RS12205 WP_211062957.1 2399517..2401901(-) (recD2) [Bacillus pumilus strain JJ1622]
GTGCAGGAACATCCAGATCAAATGAAGCTTGAGGACGAACCGTTTTTAAAGGGGACAGTTCAAGCCGTTATTTTCCATAA
TGAAAGTAATTTATACTCGGTGTTAAAGGTGAAAGTCATTGAAACATCGGAAAACTTAGAGGAAAAAACAGCATCTGTCA
CAGGCTACTTCCCAGCACTTCATGAGGAAGAAACTTACACCTTCTATGGCAAAGTCACAAGCCATCCGAAGTTTGGTGAA
CAGTTTCAGGCGACTCATTTTCAAAAGGAAGTACCAACAACAAAGCAAGGAATAATCCATTATCTTTCAAGTGATTTATT
TGAGGGGATAGGCAAAAAGACAGCGGAAGAAATTGTAGGAAAGCTTGGCAGTGAGACGCTTCATAAAATTATGCGTGACC
CAGCGGTTTTGTATGACGTTCCGCGCTTATCAAAAAAGAAGGCAGATAAGCTGGCTGCAGCGCTCCAGGAGCATCAAGGA
TTGGAACAAATCATGATTAGCCTGAATCAATACGGCTTTGGTCCGCAGCTCAGTATGAAGATTTATCAAGTGTACGAGAG
TGAGACGCTACAGAAGATTGAAGAAAACCCGTATCAACTCGTCAAGGATGTTGAAGGGATCGGATTTATTAAGGCGGATG
AACTTGGCGCTAGAACCGGCATCTCAGGAAGTGACCCAGAGCGAATCCGTGCAGCCTTGCTTTATACAGTGGAGACAGCC
AGTCTTCAGGACGGTCATACGTACATACAAACAAAGGATTTGATCGTTGAAACCCGAAAACTACTCAATCAGACAGGAAA
TGAGTACAAAGTGACGGAAATGGACGTCGCCAATCAGATCATTGCACTTGGCGAAGGGAAAGACATGATCATTGAAGATG
AGCGCTGCTATCATCCGTCCTTATTTTATGCCGAGCAAAGTGTCGCGAAACGTATACAAAAAATCGTCTCCCAAACGGAA
TATGCAGATCAATTTCCTGAATCAGAATTCCTTCTAGCCCTTGGTGAACTAGAGGAACGGCTAGGCGTCCAATATGCGCC
GACACAAAAAGAAGCGATTCAAAAGGCACTCATGTCCCCAATGCTGCTTTTAACAGGCGGACCTGGGACTGGGAAGACAA
CAGTCATTAAAGGGATTGTTGAGCTTTACAGCGATCTTCATGGTGTATCACTTGACCCAAGTGATTATAAAAAGGATGAA
TCCTTCCCATTTGTGCTTGCGGCACCAACTGGACGAGCAGCTAAACGGATGACAGAATCAACAGGGCTTCCAGCTGTGAC
GATTCATCGGCTGCTTGGTTGGAACGGATCAGAGGGATTTTCTCATGATGATGAACAGCCGATTGAAGGAAAGCTTGTCA
TCATTGATGAATCAAGTATGCTAGATATTTGGCTTGCGAATCACTTGTTTAAAGCCATTCCTGACCATATACAAGTGATC
ATGGTGGGGGATGAACATCAGCTTCCGTCTGTCGGACCAGGCCAGGTGTTAAGAGACTTGCTTGCATCACAAGCCGTGCC
AGCTGTTACCCTAACAGATATTTACCGGCAGGCAGACGGCTCCAGCATTGTTGAACTTGCACATGATATGAAAAATGGTG
TCCTACCAAAGGATATTACCGCACGTTCAAAGGATCGATCTTTCATCAAATGCTCAGCTGATCAAATGAAAGAAGTGATT
GAGAAAGTCGTCAGCAATGCTGCTCAAAAAGGCTATTCAGCTAAAGACATTCAAGTGCTTGCGCCCATGTATAAAGGAAA
AGCAGGCATTAATGAGCTCAATAAAATGCTGCAGCACATTTTGAATCCTAAAAAACCAAAAGGTCGAGAAATTCCTTTTG
GTGATGTGGTGTACCGGACTGGTGATAAAGTGCTTCAGCTTGTGAATCAGCCAGAGAACAATATTTTTAACGGAGATATT
GGCGAAATTGTCTCGATTTTTTATGCGAAAGAAAACACAGAAAAAGAAGATATGGCTGTGATCTCCTTTGATGGGAATGA
AATCACTTTTACTAAAAAGGATTTTCATCAATTTACACACGCCTATTGTTGCTCTATCCACAAATCACAAGGCAGTGAAT
TCCCTATCGTGGTACTACCAGTCGTGAGAAGTTACTACAGAATGCTTCGGCGAAATTTGCTGTACACAGCCATTACACGA
AGTAAAAAGTTTTTAATCCTGTGCGGCGAGGAATCAGCACTAGAGTGGGGCGTGAAAAACAATGAGGATTCCCTCAGACA
AACGTCCTTAACGATGCGGCTCGTGCAAACCGAAGAGATTATGGATGCGGAGCTTGCAGCACTTCAAAGAGAACTGCCGT
TTAGCGTGCATGATGCAAATATTGGTATGGAGGGAATCACTCCATTTGATTTTATGCATGAATAA

Domains

Predicted by InterproScan.

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (593-659)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (680-728)

• Helix-hairpin-helix containing domain (HHH_RecD2) (157-248)

• AAA domain (AAA_30) (345-553)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	80.151	100	0.804