Detailed information NTG1020104

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: DQM46_RS08810
• Genome accession: NZ_LS483357
• Coordinates: 1700315..1701583 (+)
• Length: 422 a.a.
• NCBI ID: WP_011018264.1
• Uniprot ID: -
• Organism: Streptococcus pyogenes strain NCTC8326
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1695315..1706583

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQM46_RS08795 (NCTC8326_01756)	-	1695768..1697741 (+)	1974	WP_011529042.1	amidase family protein	-
DQM46_RS08800 (NCTC8326_01757)	pabB	1697926..1699683 (+)	1758	WP_021299283.1	aminodeoxychorismate synthase component I	-
DQM46_RS08805 (NCTC8326_01758)	-	1699716..1700282 (+)	567	WP_011529044.1	aminodeoxychorismate/anthranilate synthase component II	-
DQM46_RS08810 (NCTC8326_01759)	rarA	1700315..1701583 (+)	1269	WP_011018264.1	replication-associated recombination protein A	Machinery gene
DQM46_RS08825 (NCTC8326_01762)	-	1702082..1702522 (+)	441	WP_042769804.1	GNAT family N-acetyltransferase	-
DQM46_RS08830 (NCTC8326_01763)	-	1702577..1703083 (+)	507	WP_011529046.1	DNA topology modulation protein	-
DQM46_RS08835 (NCTC8326_01764)	smeZ	1703332..1704033 (+)	702	WP_011529047.1	streptococcal mitogenic exotoxin SmeZ	-
DQM46_RS08840 (NCTC8326_01765)	-	1704360..1704584 (-)	225	WP_011529048.1	hypothetical protein	-
DQM46_RS08845 (NCTC8326_01766)	-	1704761..1706389 (+)	1629	WP_021299280.1	ABC transporter substrate-binding protein	-

Sequence

Protein

• Length: 422 a.a.
• Molecular weight: 46671.15 Da
• Isoelectric Point: 6.3774

>NTDB_id=1020104 DQM46_RS08810 WP_011018264.1 1700315..1701583(+) (rarA) [Streptococcus pyogenes strain NCTC8326]
MPDHLALRMRPKTISEVIGQKHLVGEGKIIRRMVEANRLSSMILYGPPGIGKTSIASAIAGTTRYAFRTFNATIDSKKRL
QEIAEEAKFSGGLVLLLDEIHRLDKTKQDFLLPLLENGTIIMIGATTENPFFSVTPAIRSRVQIFELEPLSNEDIKTAIQ
LAISDKERGFPFLVTIDDEALDFIVTATNGDLRSAYNSLDLAVMSTSPNEDSSRHISLETMENSLQRSYITMDKNGDGHY
DVLSALQKSIRGSDVNASLHYAARLVEAGDLPSLARRLTIIAYEDIGLANPDAQVHTVTALDAAQRIGFPEARILIANVV
IDLALSPKSNSAYLAMDAALADLRTSGNLPIPRHLRDGHYAGSKDLGNAKDYLYPHAYPEKWVKQQYLPDKLVGHHYFEA
NETGKYERALGSNKERIDKLLD

Nucleotide

• Length: 1269 bp

>NTDB_id=1020104 DQM46_RS08810 WP_011018264.1 1700315..1701583(+) (rarA) [Streptococcus pyogenes strain NCTC8326]
ATGCCTGATCATTTAGCGCTCAGAATGCGCCCCAAAACCATTTCAGAGGTCATCGGACAAAAACACCTTGTTGGCGAAGG
CAAAATCATCCGTCGCATGGTGGAAGCAAATAGACTATCGTCCATGATCCTCTATGGCCCTCCAGGAATCGGTAAAACTT
CCATTGCTTCTGCTATTGCTGGTACTACTAGATATGCCTTTCGGACCTTTAATGCCACCATTGACAGCAAAAAACGTCTC
CAAGAAATTGCGGAAGAAGCTAAATTTTCTGGTGGCTTGGTATTATTACTAGACGAGATTCATCGCCTTGACAAGACAAA
ACAAGATTTTCTTTTACCCTTACTTGAGAACGGCACCATTATCATGATTGGCGCAACCACTGAGAATCCCTTCTTTTCAG
TGACACCCGCTATCAGAAGCAGGGTCCAGATTTTTGAATTGGAACCACTTTCTAACGAGGATATTAAAACAGCCATTCAG
CTAGCAATTTCCGACAAAGAACGGGGATTTCCTTTTTTAGTGACAATTGATGATGAGGCGCTAGATTTCATTGTTACCGC
CACAAATGGAGACCTACGATCTGCTTATAATTCCTTGGATCTAGCAGTCATGTCTACTTCTCCTAATGAAGATAGTAGCC
GTCATATTAGTCTAGAGACAATGGAAAATAGTCTGCAGCGTAGTTATATTACCATGGATAAAAACGGGGACGGGCATTAT
GATGTTTTATCTGCCTTACAAAAATCCATTAGAGGTTCTGATGTCAATGCTAGCCTGCACTACGCCGCTCGTTTAGTAGA
AGCTGGAGACTTGCCTAGTTTAGCAAGACGATTGACCATTATTGCTTACGAAGATATTGGCTTAGCCAACCCTGACGCCC
AAGTTCATACCGTCACCGCACTAGATGCCGCTCAACGCATTGGTTTTCCAGAAGCTCGTATTCTTATCGCTAACGTGGTC
ATTGATTTGGCTCTATCTCCTAAATCAAATTCAGCTTATTTAGCTATGGATGCAGCTTTAGCTGATTTGAGAACATCAGG
TAACCTCCCCATTCCAAGGCATCTTAGAGACGGGCATTACGCTGGCAGCAAGGACCTAGGCAATGCCAAAGATTACCTCT
ACCCACACGCCTACCCTGAAAAATGGGTCAAACAACAATACCTACCAGATAAATTAGTAGGACATCATTATTTTGAAGCC
AATGAAACCGGTAAATACGAACGCGCACTTGGTTCAAATAAAGAGCGTATTGATAAGCTCTTAGACTGA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (174-251)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-415)

• ATPase family associated with various cellular activities (AAA) (AAA) (42-144)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	59.569	99.052	0.59