Detailed information NTG1020104

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: AB0R86_RS05730
• Genome accession: NZ_CP160227
• Coordinates: 1104296..1105249 (+)
• Length: 317 a.a.
• NCBI ID: WP_007409125.1
• Uniprot ID: A7Z3B8
• Organism: Bacillus velezensis strain JJ947
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 1099296..1110249

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB0R86_RS05705 (AB0R86_05705)	argF	1101114..1102085 (+)	972	WP_106080423.1	ornithine carbamoyltransferase	-
AB0R86_RS05710 (AB0R86_05710)	-	1102161..1102340 (+)	180	WP_003155070.1	YjzC family protein	-
AB0R86_RS05715 (AB0R86_05715)	-	1102377..1102562 (-)	186	WP_007409129.1	YjzD family protein	-
AB0R86_RS05720 (AB0R86_05720)	-	1102823..1103557 (+)	735	WP_007409127.1	hypothetical protein	-
AB0R86_RS05725 (AB0R86_05725)	-	1103640..1104206 (+)	567	WP_007409126.1	hypothetical protein	-
AB0R86_RS05730 (AB0R86_05730)	med	1104296..1105249 (+)	954	WP_007409125.1	BMP family ABC transporter substrate-binding protein	Regulator
AB0R86_RS05735 (AB0R86_05735)	comZ	1105262..1105453 (+)	192	WP_042635050.1	ComZ family protein	Regulator
AB0R86_RS05740 (AB0R86_05740)	-	1105482..1105700 (-)	219	WP_007409123.1	hypothetical protein	-
AB0R86_RS05745 (AB0R86_05745)	-	1105867..1106805 (+)	939	WP_007409122.1	beta-ketoacyl-ACP synthase III	-
AB0R86_RS05750 (AB0R86_05750)	fabF	1106828..1108066 (+)	1239	WP_020955629.1	beta-ketoacyl-ACP synthase II	-
AB0R86_RS05755 (AB0R86_05755)	-	1108149..1108934 (+)	786	WP_007409120.1	DUF2268 domain-containing protein	-
AB0R86_RS05760 (AB0R86_05760)	-	1109108..1110094 (+)	987	WP_007409119.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35342.99 Da
• Isoelectric Point: 4.6686

>NTDB_id=1020104 AB0R86_RS05730 WP_007409125.1 1104296..1105249(+) (med) [Bacillus velezensis strain JJ947]
MITRLVMIFSVLLLLSGCAQTPFKGKIEKVGMLFPDTISDLVWGTKGYKGLLAIQSEFNVDVYYKENIRSDEDILKAIDD
FHKKGVNLLYGHGNEYEEIFNMISKDYPDMEFVVANGTAKSDNVTSVHLMGEAMGFFGGMTAAHMSKTNEVGVIASFLWQ
PEVDGFIKGAKYEKPDITVNTEFTDHWDNGNEALHLYEKLKAEGTDVVYPAGDGYNVPVIQQIKKDGLYAIGYVAEQSNL
GKNTVLTSTVQNVDKAYTLIAEQYNKGTLKSGDHNFDFREGVVEMGTFSPLVDKAFQDKISDLVKTYNRTNELPSNE

Nucleotide

• Length: 954 bp

>NTDB_id=1020104 AB0R86_RS05730 WP_007409125.1 1104296..1105249(+) (med) [Bacillus velezensis strain JJ947]
TTGATCACCAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGCGGATGCGCACAAACTCCGTTTAAAGGAAAAAT
TGAGAAGGTCGGAATGCTTTTTCCCGATACTATCAGTGACTTGGTATGGGGCACAAAAGGTTACAAAGGTTTATTAGCGA
TACAATCTGAATTTAACGTTGACGTTTATTATAAAGAAAATATCAGATCCGATGAAGATATTTTAAAAGCGATAGATGAT
TTTCATAAAAAAGGAGTCAATCTTTTATACGGGCACGGAAATGAATACGAGGAAATCTTCAATATGATCAGCAAGGATTA
TCCCGACATGGAATTCGTCGTCGCAAACGGAACGGCGAAAAGCGATAATGTCACAAGCGTTCATCTTATGGGAGAAGCAA
TGGGTTTTTTCGGGGGAATGACAGCCGCCCATATGTCAAAAACCAATGAGGTCGGCGTCATCGCCTCCTTTTTGTGGCAG
CCTGAAGTAGACGGCTTTATCAAAGGGGCGAAATATGAAAAGCCTGATATCACCGTCAATACTGAATTTACGGACCACTG
GGATAACGGCAATGAAGCGCTGCATCTTTACGAGAAGTTAAAAGCGGAAGGCACGGATGTTGTATATCCGGCCGGAGACG
GGTATAATGTTCCTGTCATTCAGCAAATCAAAAAAGACGGGCTTTACGCCATCGGCTATGTCGCCGAGCAATCGAATCTC
GGCAAAAACACGGTGCTGACAAGCACGGTGCAAAACGTAGATAAAGCCTATACATTAATTGCCGAGCAATATAATAAAGG
TACGCTCAAGAGCGGAGATCACAACTTTGATTTCAGGGAAGGAGTCGTTGAAATGGGGACGTTCAGCCCTCTGGTGGACA
AAGCATTTCAAGACAAAATCTCAGACCTTGTAAAAACGTATAACCGAACAAATGAACTGCCGTCAAATGAATAG

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (27-317)

3D structure

• AlphaFold DB: A7Z3B8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	78.549	100	0.785