Detailed information NTG1020009

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: DQM51_RS09200
• Genome accession: NZ_LS483356
• Coordinates: 1741956..1743224 (+)
• Length: 422 a.a.
• NCBI ID: WP_002982538.1
• Uniprot ID: -
• Organism: Streptococcus pyogenes strain NCTC8230
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1736956..1748224

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQM51_RS09185 (NCTC8230_01825)	-	1737409..1739382 (+)	1974	WP_111713397.1	amidase family protein	-
DQM51_RS09190 (NCTC8230_01826)	pabB	1739567..1741324 (+)	1758	WP_111713398.1	aminodeoxychorismate synthase component I	-
DQM51_RS09195 (NCTC8230_01827)	-	1741357..1741923 (+)	567	WP_002982541.1	aminodeoxychorismate/anthranilate synthase component II	-
DQM51_RS09200 (NCTC8230_01828)	rarA	1741956..1743224 (+)	1269	WP_002982538.1	replication-associated recombination protein A	Machinery gene
DQM51_RS09215 (NCTC8230_01831)	smeZ	1743797..1744498 (+)	702	WP_032467239.1	streptococcal mitogenic exotoxin SmeZ	-
DQM51_RS09220 (NCTC8230_01832)	-	1744824..1745048 (-)	225	WP_111713399.1	hypothetical protein	-
DQM51_RS09225 (NCTC8230_01833)	-	1745227..1746855 (+)	1629	WP_046177483.1	ABC transporter substrate-binding protein	-
DQM51_RS09230 (NCTC8230_01834)	-	1746968..1747945 (+)	978	WP_002982524.1	ABC transporter permease	-

Sequence

Protein

• Length: 422 a.a.
• Molecular weight: 46645.07 Da
• Isoelectric Point: 6.3774

>NTDB_id=1020009 DQM51_RS09200 WP_002982538.1 1741956..1743224(+) (rarA) [Streptococcus pyogenes strain NCTC8230]
MPDHLALRMRPKTISEVIGQKHLVGEGKIIRRMVEANRLSSMILYGPPGIGKTSIASAIAGTTRYAFRTFNATIDSKKRL
QEIAEEAKFSGGLVLLLDEIHRLDKTKQDFLLPLLENGTIIMIGATTENPFFSVTPAIRSRVQIFELEPLSNEDIKTAIQ
LAISDKERGFPFLVTIDDEALDFIVTATNGDLRSAYNSLDLAVMSTSPNEDSSRHISLETMENSLQRSYITMDKNGDGHY
DVLSALQKSIRGSDVNASLHYAARLVEAGDLPSLARRLTIIAYEDIGLANPDAQVHTVTALDAAQRIGFPEARILIANVV
IDLALSPKSNSAYLAMDAALADLRTSGNLPIPRHLRDGHYAGSKDLGNAKDYLYPHAYPEKWVKQQYLPDKLVGHHYFEA
NETGKYERALGSNKERIDKLSD

Nucleotide

• Length: 1269 bp

>NTDB_id=1020009 DQM51_RS09200 WP_002982538.1 1741956..1743224(+) (rarA) [Streptococcus pyogenes strain NCTC8230]
ATGCCTGATCATTTAGCGCTCAGAATGCGTCCCAAAACCATTTCAGAGGTCATCGGACAAAAACACCTTGTTGGCGAAGG
CAAAATCATCCGTCGCATGGTGGAAGCAAATAGACTATCGTCCATGATCCTCTATGGCCCTCCAGGAATCGGTAAAACTT
CCATTGCTTCTGCTATTGCTGGTACTACTAGATATGCCTTTCGGACCTTTAATGCCACCATTGACAGCAAAAAACGTCTC
CAAGAAATTGCGGAAGAAGCTAAATTTTCTGGTGGCTTGGTATTATTACTAGACGAGATTCATCGCCTTGACAAGACAAA
ACAAGATTTTCTTTTACCTTTACTTGAGAATGGCACCATTATCATGATTGGCGCAACCACTGAGAACCCCTTCTTTTCAG
TGACACCCGCTATCAGAAGCAGGGTCCAGATTTTTGAATTGGAACCACTTTCTAACGAGGATATTAAAACAGCCATTCAG
CTAGCAATTTCCGACAAAGAACGGGGATTTCCTTTTTTAGTGACAATTGATGATGAGGCGCTAGATTTCATTGTTACCGC
CACAAATGGAGACCTACGATCTGCTTATAATTCCTTGGATCTAGCAGTCATGTCTACTTCTCCTAATGAAGATAGTAGCC
GTCATATTAGTCTAGAGACAATGGAAAATAGTCTGCAGCGTAGTTATATTACCATGGATAAAAACGGGGATGGGCATTAT
GATGTTTTATCTGCCTTACAAAAATCCATTAGAGGTTCTGATGTCAATGCTAGCCTGCACTACGCCGCTCGTTTAGTAGA
AGCTGGAGACTTGCCTAGTTTAGCAAGACGATTGACCATTATTGCTTACGAAGATATTGGCTTAGCCAACCCTGACGCCC
AAGTTCATACCGTCACCGCACTAGATGCCGCTCAACGCATTGGTTTTCCAGAAGCTCGTATTCTTATCGCTAACGTGGTC
ATTGATTTGGCTCTATCACCTAAATCCAATTCAGCTTATTTAGCTATGGATGCAGCTTTAGCTGATTTGAGAACATCAGG
TAACCTCCCCATTCCAAGGCATCTTAGAGACGGGCATTATGCTGGCAGCAAGGACCTAGGCAATGCCAAAGATTACCTCT
ACCCACACGCCTACCCTGAAAAATGGGTCAAACAACAATACCTACCAGATAAATTAGTAGGACATCATTATTTTGAAGCC
AATGAAACAGGTAAATACGAACGCGCACTTGGTTCAAATAAAGAGCGTATTGATAAGCTCTCAGACTGA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (174-251)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-415)

• ATPase family associated with various cellular activities (AAA) (AAA) (42-144)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	59.712	98.815	0.59