Detailed information    

insolico Bioinformatically predicted

Overview


Name   mutS/mutS2   Type   Machinery gene
Locus tag   DQL39_RS00770 Genome accession   NZ_LS483353
Coordinates   133119..135458 (+) Length   779 a.a.
NCBI ID   WP_023078038.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain NCTC4001     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 128119..140458
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQL39_RS00750 (NCTC4001_00149) lepB 130451..131044 (-) 594 WP_002983074.1 signal peptidase I -
  DQL39_RS00755 (NCTC4001_00150) rnhC 131055..131957 (-) 903 WP_038433573.1 ribonuclease HIII -
  DQL39_RS00760 (NCTC4001_00151) - 132114..132422 (+) 309 WP_002993251.1 hypothetical protein -
  DQL39_RS00765 (NCTC4001_00152) - 132425..132970 (+) 546 WP_038433572.1 CvpA family protein -
  DQL39_RS00770 (NCTC4001_00153) mutS/mutS2 133119..135458 (+) 2340 WP_023078038.1 endonuclease MutS2 Machinery gene
  DQL39_RS00775 (NCTC4001_00154) - 135462..135962 (+) 501 WP_011018191.1 phosphatase PAP2 family protein -
  DQL39_RS00780 (NCTC4001_00155) trxA 136025..136357 (+) 333 WP_256363924.1 thioredoxin -
  DQL39_RS00785 (NCTC4001_00156) - 136409..136995 (-) 587 Protein_128 helix-turn-helix domain-containing protein -
  DQL39_RS00790 (NCTC4001_00157) mutY 137172..138326 (-) 1155 WP_162472513.1 A/G-specific adenine glycosylase -
  DQL39_RS09110 (NCTC4001_00158) - 138494..138777 (+) 284 Protein_130 hypothetical protein -
  DQL39_RS00800 (NCTC4001_00159) rpsF 138950..139240 (+) 291 WP_002983117.1 30S ribosomal protein S6 -
  DQL39_RS00805 (NCTC4001_00160) ssb 139262..139753 (+) 492 WP_002983122.1 single-stranded DNA-binding protein Machinery gene
  DQL39_RS00810 (NCTC4001_00161) rpsR 139918..140157 (+) 240 WP_002983142.1 30S ribosomal protein S18 -

Sequence


Protein


Download         Length: 779 a.a.        Molecular weight: 87850.07 Da        Isoelectric Point: 6.5465

>NTDB_id=1019745 DQL39_RS00770 WP_023078038.1 133119..135458(+) (mutS/mutS2) [Streptococcus pyogenes strain NCTC4001]
MNNKILEQLEFNKVKELLLPYLKTEQSQEELLELEPMTEAPKIEKSFNEISDMEQIFVEHHSFGIVSLSSISESLKRLEL
SADLNIQELLAIKKVLQSSSDMIHFYSDLDNVSFQSLDRLFENLEQFPNLQGSFQAINDGGFLEHFASPELERIRRQLTN
SERRVRQILQDMLKEKAELLSENLIASRSGRSVLPVKNTYRNRISGVVHDISSSGSTVYIEPRAVVTLNEEITQLRADER
HEEGRILHAFSDLLRPHVATIRNNAWILGHLDFVRAKYLFMSDNKATIPKISNDSTLALINVRHPLLSNPVANDLHFDHD
LTAIVITGPNTGGKTIMLKTLGLAQLMGQSGLPVLADKGSKIAVFNNIFADIGDEQSIEQSLSTFSSHMTHIVSILNEAD
HNSLVLFDELGAGTDPQEGASLAMAILEHLRLSHIKTMATTHYPELKAYGIETNFVENASMEFDAETLSPTYRFMQGVPG
RSNAFEIASRLGLAPFIVKQAKQMTDSDSDVNRIIEQLEAQTLETRRRLDHIKEVEQENLKFNRAVKKLYNEFSHERDKE
LEKIYQEAQEIVDMALNESDTILKKLNDKSQLKPHEIIDAKAQIKKLAPQVDLSKNKVLNKAKKIKAARAPRIGDDIIVT
SYGQRGTLTSQLKDGRWEAQVGIIKMTLTHDEFTLVRVQEEQKVKNKQINVVKKADSSGPRARLDLRGKRYEEAMQELDH
FIDQALLNNMGQVDIIHGIGTGVIREGVTKYLRRHKHVKHFAYAPQNAGGSGATIVTLG

Nucleotide


Download         Length: 2340 bp        

>NTDB_id=1019745 DQL39_RS00770 WP_023078038.1 133119..135458(+) (mutS/mutS2) [Streptococcus pyogenes strain NCTC4001]
ATGAATAACAAGATTTTAGAGCAGTTAGAATTTAACAAAGTTAAGGAATTGCTATTACCTTATCTCAAGACAGAACAATC
CCAAGAAGAATTATTAGAGCTGGAGCCGATGACGGAGGCTCCTAAAATAGAAAAAAGTTTTAATGAAATTTCTGATATGG
AACAGATTTTTGTTGAACATCACTCATTTGGCATAGTTAGCCTAAGTTCAATCTCTGAGAGTTTAAAACGTTTAGAACTT
TCAGCTGATCTTAATATTCAAGAACTTTTGGCTATCAAAAAAGTTTTACAGAGTTCTTCGGATATGATTCACTTTTATTC
TGATTTGGATAATGTTTCTTTCCAATCTTTGGATCGTTTGTTTGAAAATTTGGAACAATTCCCTAATCTGCAAGGGTCTT
TTCAAGCTATCAATGATGGTGGTTTTTTAGAACATTTTGCGAGTCCAGAATTAGAGCGTATCCGTCGTCAATTAACAAAT
AGTGAACGACGGGTTCGTCAGATTTTACAGGATATGCTTAAGGAAAAAGCAGAGCTTTTATCAGAAAATCTAATCGCTAG
TCGTAGTGGACGAAGTGTCCTACCAGTAAAAAATACTTATCGGAATCGTATTTCTGGTGTGGTTCATGACATCTCTTCTT
CAGGAAGTACTGTTTATATTGAGCCTCGTGCTGTAGTTACACTAAACGAAGAGATAACGCAGCTTAGAGCTGACGAACGC
CACGAAGAAGGTCGTATTTTACACGCATTTTCAGACTTGTTAAGACCTCATGTCGCCACTATTAGAAATAATGCATGGAT
TCTTGGGCATCTTGATTTTGTAAGGGCTAAATATCTTTTTATGTCTGATAATAAGGCGACGATACCTAAGATTTCTAATG
ACAGCACGTTAGCATTAATCAATGTTCGTCATCCTCTTTTAAGTAATCCTGTGGCTAATGACTTACATTTTGATCACGAT
TTAACTGCAATTGTCATTACTGGTCCCAATACTGGTGGTAAGACGATTATGCTAAAAACACTCGGTTTAGCACAATTAAT
GGGACAGTCTGGTTTGCCAGTATTAGCGGATAAAGGTAGTAAAATTGCAGTATTTAACAATATCTTTGCAGATATTGGCG
ATGAGCAATCTATTGAACAAAGTCTATCAACTTTTTCTAGTCATATGACGCACATAGTCAGTATTTTAAACGAGGCTGAC
CACAATAGTTTAGTTCTCTTTGATGAACTAGGAGCAGGAACGGATCCTCAAGAAGGTGCTAGTTTGGCCATGGCTATTTT
AGAACACCTTAGGTTAAGTCATATCAAAACGATGGCGACCACGCACTATCCAGAATTAAAAGCTTATGGGATTGAGACAA
ATTTTGTAGAGAATGCGAGCATGGAATTTGATGCAGAAACGCTTAGCCCCACATATCGCTTTATGCAAGGAGTTCCTGGA
CGCTCAAATGCATTTGAAATTGCTTCTCGCCTTGGTTTAGCTCCATTTATTGTTAAACAAGCTAAGCAGATGACAGATTC
TGACTCAGATGTTAACCGTATTATTGAACAGTTAGAGGCACAGACACTTGAGACACGTAGAAGACTGGATCATATTAAAG
AAGTTGAACAAGAAAACCTCAAATTCAATCGTGCGGTTAAGAAACTCTATAATGAATTTTCACATGAACGCGATAAAGAG
TTAGAAAAAATCTATCAAGAAGCTCAAGAAATTGTAGATATGGCTTTGAATGAGAGTGATACTATCTTAAAAAAACTCAA
TGATAAGAGTCAATTAAAACCTCACGAAATTATAGATGCTAAGGCACAAATAAAAAAATTAGCGCCTCAAGTTGATTTAT
CAAAAAATAAAGTCTTAAATAAGGCTAAAAAAATCAAAGCAGCTCGTGCCCCTAGAATTGGTGATGATATTATAGTGACT
AGCTATGGACAGCGAGGTACCTTAACTAGTCAATTAAAAGATGGCCGTTGGGAAGCACAAGTGGGAATTATCAAAATGAC
ATTAACACATGATGAATTTACCCTCGTTAGAGTCCAAGAAGAACAGAAAGTCAAAAATAAACAGATTAATGTGGTTAAAA
AGGCTGATAGTTCTGGACCAAGAGCTCGACTTGATCTTAGAGGTAAAAGATACGAAGAAGCTATGCAAGAGTTAGATCAT
TTTATTGATCAAGCATTGCTTAACAATATGGGACAAGTTGATATCATTCATGGGATTGGTACAGGCGTTATCCGTGAGGG
AGTGACAAAATATCTTCGTCGTCATAAGCATGTTAAGCATTTTGCTTATGCCCCACAAAATGCAGGGGGATCTGGCGCCA
CAATTGTAACGTTAGGGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutS/mutS2 Bacillus subtilis subsp. subtilis str. 168

40.633

100

0.412


Multiple sequence alignment