Detailed information NTG1019234

Bioinformatically predicted

Overview

• Name: codY
• Type: Regulator
• Locus tag: AB0R66_RS08495
• Genome accession: NZ_CP160214
• Coordinates: 1716198..1716977 (+)
• Length: 259 a.a.
• NCBI ID: WP_003154263.1
• Uniprot ID: I2C545
• Organism: Bacillus velezensis strain JJ747
• Function: repression of comK (predicted from homology) Competence regulation

Genomic Context

Location: 1711198..1721977

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB0R66_RS08475 (AB0R66_08475)	trmFO	1711885..1713192 (+)	1308	WP_012117550.1	FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))- methyltransferase TrmFO	-
AB0R66_RS08480 (AB0R66_08480)	xerC	1713262..1714179 (+)	918	WP_007409774.1	tyrosine recombinase XerC	-
AB0R66_RS08485 (AB0R66_08485)	hslV	1714195..1714740 (+)	546	WP_241458200.1	ATP-dependent protease subunit HslV	-
AB0R66_RS08490 (AB0R66_08490)	hslU	1714748..1716160 (+)	1413	WP_254894347.1	HslU--HslV peptidase ATPase subunit	-
AB0R66_RS08495 (AB0R66_08495)	codY	1716198..1716977 (+)	780	WP_003154263.1	GTP-sensing pleiotropic transcriptional regulator CodY	Regulator
AB0R66_RS08500 (AB0R66_08500)	flgB	1717331..1717720 (+)	390	WP_003154260.1	flagellar basal body rod protein FlgB	-
AB0R66_RS08505 (AB0R66_08505)	flgC	1717720..1718172 (+)	453	WP_007409776.1	flagellar basal body rod protein FlgC	-
AB0R66_RS08510 (AB0R66_08510)	fliE	1718183..1718503 (+)	321	WP_007409777.1	flagellar hook-basal body complex protein FliE	-
AB0R66_RS08515 (AB0R66_08515)	fliF	1718546..1720156 (+)	1611	WP_199022520.1	flagellar basal-body MS-ring/collar protein FliF	-
AB0R66_RS08520 (AB0R66_08520)	fliG	1720169..1721185 (+)	1017	WP_003154256.1	flagellar motor switch protein FliG	-
AB0R66_RS08525 (AB0R66_08525)	fliH	1721178..1721933 (+)	756	WP_015239852.1	flagellar assembly protein FliH	-

Sequence

Protein

• Length: 259 a.a.
• Molecular weight: 29056.24 Da
• Isoelectric Point: 4.6017

>NTDB_id=1019234 AB0R66_RS08495 WP_003154263.1 1716198..1716977(+) (codY) [Bacillus velezensis strain JJ747]
MALLQKTRIINSMLQAAAGKPVNFKEMAETLRDVIDSNIFVVSRRGKLLGYSINQQIENDRMKKMLEDRQFPEEYTRNLF
NVPETSSNLDINSEYTAFPVENRDLFQAGLTTIVPIIGGGERLGTLILSRLQDQFEDDDLILAEYGATVVGMEILREKAE
EIEEEARSKAVVQMAISSLSYSELEAIEHIFEELDGNEGLLVASKIADRVGITRSVIVNALRKLESAGVIESRSLGMKGT
YIKVLNNKFLIELENLKSH

Nucleotide

• Length: 780 bp

>NTDB_id=1019234 AB0R66_RS08495 WP_003154263.1 1716198..1716977(+) (codY) [Bacillus velezensis strain JJ747]
ATGGCTTTACTACAAAAAACACGAATTATTAACAGCATGCTGCAGGCTGCGGCAGGCAAACCCGTAAACTTTAAAGAAAT
GGCTGAAACGCTTCGTGACGTCATTGATTCTAATATTTTCGTCGTCAGCCGCAGAGGAAAGCTTTTGGGCTACTCTATTA
ATCAGCAGATTGAAAATGACCGCATGAAAAAAATGCTTGAAGACCGCCAGTTCCCGGAAGAGTACACGAGAAATCTGTTC
AATGTTCCGGAGACGTCTTCAAACCTTGATATCAACAGCGAATACACGGCTTTTCCTGTGGAAAACAGAGACCTGTTCCA
AGCGGGCTTAACAACGATCGTGCCGATCATCGGCGGAGGAGAGAGACTGGGCACGCTCATTCTGTCCCGTCTGCAGGATC
AATTTGAAGATGATGATCTCATTCTTGCTGAATACGGAGCAACCGTTGTAGGAATGGAGATTTTAAGAGAAAAAGCGGAA
GAAATCGAAGAAGAGGCGCGAAGCAAAGCGGTTGTTCAAATGGCGATCAGTTCTCTGTCTTACAGTGAACTTGAAGCGAT
TGAGCATATCTTTGAAGAGCTTGACGGAAACGAAGGCTTGCTTGTGGCAAGTAAGATTGCGGACCGTGTCGGCATTACGC
GTTCAGTAATCGTTAATGCGCTGAGAAAGCTGGAAAGCGCAGGCGTCATTGAATCCAGATCACTGGGAATGAAGGGGACG
TACATTAAAGTTCTGAACAACAAATTCCTTATTGAATTGGAAAACCTTAAATCTCATTAA

Domains

Predicted by InterproScan.

• CodY GAF-like domain (CodY) (3-178)

• CodY helix-turn-helix domain (HTH_CodY) (198-255)

3D structure

• AlphaFold DB: I2C545

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
codY	Bacillus subtilis subsp. subtilis str. 168	99.228	100	0.992
codY	Lactococcus lactis subsp. lactis strain DGCC12653	47.843	98.456	0.471