Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutS/mutS2   Type   Machinery gene
Locus tag   DQL23_RS01215 Genome accession   NZ_LS483341
Coordinates   256034..258367 (+) Length   777 a.a.
NCBI ID   WP_060553146.1    Uniprot ID   -
Organism   Streptococcus gordonii strain NCTC7865     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 251034..263367
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQL23_RS01195 (NCTC7865_00235) lepB 253479..254081 (-) 603 WP_048776365.1 signal peptidase I -
  DQL23_RS01200 (NCTC7865_00236) rnhC 254085..254975 (-) 891 WP_045505412.1 ribonuclease HIII -
  DQL23_RS01205 (NCTC7865_00237) - 255125..255430 (+) 306 WP_008808274.1 hypothetical protein -
  DQL23_RS01210 (NCTC7865_00238) - 255430..255978 (+) 549 WP_060553313.1 CvpA family protein -
  DQL23_RS01215 (NCTC7865_00239) mutS/mutS2 256034..258367 (+) 2334 WP_060553146.1 endonuclease MutS2 Machinery gene
  DQL23_RS01220 (NCTC7865_00240) - 258378..259022 (+) 645 WP_060553145.1 GNAT family N-acetyltransferase -
  DQL23_RS01225 (NCTC7865_00241) - 259124..260542 (+) 1419 WP_060553144.1 C69 family dipeptidase -
  DQL23_RS01230 (NCTC7865_00242) trxA 260627..260941 (+) 315 WP_002898369.1 thioredoxin -
  DQL23_RS01235 (NCTC7865_00243) - 261192..262631 (+) 1440 WP_060553143.1 APC family permease -

Sequence

Protein


Download         Length: 777 a.a.        Molecular weight: 87366.96 Da        Isoelectric Point: 6.0647

>NTDB_id=1018729 DQL23_RS01215 WP_060553146.1 256034..258367(+) (mutS/mutS2) [Streptococcus gordonii strain NCTC7865]
MNTKILETLEFNKIKDLFQGSLQTEQGKLELQVLQPTTKKEAIERAFLEVADMEQILVEDPHFHLAATKDITAISKRLEL
DGDLNIEELLVLKKVLRVSHDLVTFYNDLENVRLQELNRVFENLVDFPAIQGSLLAVNDGGFIESFASEELGRIRRKIQE
NESKVRDLLQEILKNKGDMLADQVVASRNGRNVLPVKNTYRNRIPGVVHDISASGTTIYIEPRAVVNLNEEISNYKADER
YELLRILQELSAMIRPHAAEIANNAWIIGHLDLVMAKLAFMRERGAVVPAISDTQAIQLLQVRHPLIQNAVANDLHFGPD
LTEIVITGPNTGGKTIMLKTLGLAQIMAQSGLPILADKGSRVGIFSQIFADIGDEQSIEQSLSTFSSHMTNIVSILEQVD
SESLVLLDELGAGTDPQEGAALAIAILEDLRLRQIKTMATTHYPELKAYGIETDWVENASMEFDTDSLRPTYRFMQGVPG
RSNAFEIARRLGLSEVIVSHAQEQTNTDSDVNRIIERLEEQTLESRKRLDNIREVEQENLKFNRALKKLYNEFNREKETE
LNKARLEAQEIVDLALSESESILKNLHAKSSLKPHEIIEAKAQLKKLAPETVDLSKNKVLKQAKKNRAPKVGDDILVTSY
GQRGTLVKQLKDGRWEAQVGLIKMTLEEQEFNLLKAEKEQQPKRKQVNVVKRANTAGPRARLDLRGKRYEEAMKELDEFI
DQALLNNMAQVDIIHGIGTGVIREGVTKYLRRNKHVKSFGYAPQNAGGSGATIVIFK

Nucleotide


Download         Length: 2334 bp        

>NTDB_id=1018729 DQL23_RS01215 WP_060553146.1 256034..258367(+) (mutS/mutS2) [Streptococcus gordonii strain NCTC7865]
ATGAATACAAAAATTTTAGAAACCTTAGAATTTAATAAAATAAAAGACTTATTCCAAGGCTCTTTACAAACGGAGCAGGG
GAAATTAGAATTACAAGTTTTACAGCCGACCACAAAAAAAGAGGCGATTGAGAGAGCCTTTTTGGAAGTTGCAGACATGG
AGCAGATTTTAGTAGAAGATCCGCATTTTCATTTGGCGGCAACCAAGGATATCACTGCTATTAGCAAGCGTTTGGAGCTT
GATGGTGACCTGAATATCGAGGAATTGCTTGTTTTAAAAAAGGTTTTGCGCGTTTCGCATGACTTGGTTACTTTTTATAA
TGACTTAGAAAATGTTCGACTTCAAGAATTGAACCGTGTTTTTGAAAATCTAGTCGACTTCCCAGCTATTCAAGGGAGTC
TGTTAGCTGTCAACGACGGGGGCTTTATTGAAAGTTTTGCTAGTGAAGAACTGGGGAGAATTCGTCGAAAGATCCAAGAG
AATGAAAGCAAGGTACGAGATCTTTTGCAAGAAATTCTCAAGAACAAGGGAGATATGCTAGCAGACCAGGTGGTAGCTAG
CCGGAATGGTCGCAATGTGCTGCCGGTTAAAAACACCTATCGGAATCGGATTCCAGGAGTGGTGCATGACATTTCTGCTA
GTGGAACGACAATTTATATCGAGCCAAGGGCAGTGGTCAATCTCAATGAGGAAATTTCCAACTACAAGGCAGACGAGCGC
TACGAACTCTTGCGAATTTTGCAAGAACTATCTGCTATGATTCGCCCTCATGCAGCTGAAATTGCCAACAATGCTTGGAT
CATCGGCCATCTTGACTTAGTGATGGCCAAGTTAGCCTTTATGCGAGAACGAGGAGCGGTAGTACCAGCCATATCCGATA
CACAAGCCATTCAGTTGCTACAGGTTCGTCATCCCCTGATTCAAAATGCAGTAGCTAATGATTTGCATTTCGGCCCTGAT
TTGACAGAGATTGTCATTACCGGACCAAATACCGGTGGTAAGACCATCATGTTGAAGACCTTGGGTCTGGCTCAGATCAT
GGCCCAATCAGGTCTGCCGATTCTGGCGGACAAGGGAAGTCGCGTCGGGATTTTCAGTCAGATTTTTGCAGACATTGGTG
ATGAGCAGTCCATTGAGCAGAGTTTGTCGACTTTCTCCAGTCACATGACCAATATCGTCTCTATTTTGGAGCAAGTTGAT
AGCGAGAGTCTGGTTCTGCTGGATGAGCTGGGAGCTGGGACTGACCCTCAGGAGGGCGCGGCTCTGGCTATTGCCATCTT
GGAAGATTTACGGCTAAGGCAGATTAAAACCATGGCGACGACCCACTATCCTGAGCTCAAAGCCTATGGGATTGAGACGG
ACTGGGTGGAAAATGCCAGCATGGAATTTGATACTGATAGTTTGCGGCCGACCTATCGCTTTATGCAGGGAGTGCCTGGC
CGCTCCAATGCCTTTGAAATTGCTCGCCGGTTAGGCTTGTCGGAGGTTATCGTTAGCCATGCCCAAGAGCAGACCAACAC
AGACAGCGATGTCAATCGGATTATTGAGCGCCTAGAGGAGCAGACGCTGGAAAGTCGCAAGCGCTTGGATAATATCCGCG
AGGTGGAGCAGGAAAATCTCAAATTTAACAGAGCCCTCAAAAAACTTTACAATGAGTTTAATCGAGAAAAGGAAACCGAG
CTCAATAAGGCACGCTTGGAAGCCCAGGAAATCGTTGATTTGGCTTTGTCAGAGAGTGAGAGCATTCTTAAAAATCTTCA
TGCTAAGTCCAGTCTCAAACCACATGAGATTATTGAAGCCAAGGCTCAGCTTAAAAAGTTGGCACCAGAAACGGTTGATT
TATCAAAGAATAAGGTACTCAAACAGGCCAAGAAAAATCGGGCGCCCAAGGTGGGAGACGATATCCTAGTCACCAGCTAT
GGTCAGCGGGGAACCTTGGTCAAGCAGCTCAAAGACGGCCGTTGGGAAGCCCAAGTCGGTCTCATTAAGATGACTCTAGA
GGAGCAGGAATTTAATCTTCTCAAGGCTGAAAAAGAGCAACAACCTAAGCGCAAGCAGGTCAATGTGGTCAAGCGAGCTA
ATACTGCTGGACCAAGAGCTAGACTGGATTTGCGAGGCAAACGCTACGAAGAAGCTATGAAAGAGCTAGATGAATTTATC
GATCAGGCCCTTCTTAATAATATGGCTCAGGTAGATATTATTCATGGTATCGGGACCGGGGTCATCCGTGAAGGAGTGAC
TAAATACCTCCGTCGCAACAAGCACGTCAAGTCCTTCGGCTATGCTCCGCAAAATGCTGGCGGCAGCGGTGCAACGATTG
TGATCTTTAAGTAA

Domains

Predicted by InterProScan.

MutS domain V (MutS_V)

(324-505)

Smr domain (Smr)

(702-777)

MutS2 and Smr-associated SH3 domain (MSSS)

(631-668)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutS/mutS2 Bacillus subtilis subsp. subtilis str. 168

39.163

100

0.398