Detailed information NTG1018709

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: DQL04_RS08330
• Genome accession: NZ_LS483340
• Coordinates: 1630479..1631747 (+)
• Length: 422 a.a.
• NCBI ID: WP_047236004.1
• Uniprot ID: -
• Organism: Streptococcus pyogenes strain NCTC12062
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1625479..1636747

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQL04_RS08315	-	1625932..1627905 (+)	1974	Protein_1538	amidase family protein	-
DQL04_RS08320 (NCTC12062_01652)	pabB	1628090..1629847 (+)	1758	WP_111690835.1	aminodeoxychorismate synthase component I	-
DQL04_RS08325 (NCTC12062_01653)	-	1629880..1630446 (+)	567	WP_047236003.1	aminodeoxychorismate/anthranilate synthase component II	-
DQL04_RS08330 (NCTC12062_01654)	rarA	1630479..1631747 (+)	1269	WP_047236004.1	replication-associated recombination protein A	Machinery gene
DQL04_RS08345 (NCTC12062_01657)	-	1632320..1633021 (+)	702	WP_047236005.1	exotoxin beta-grasp domain-containing protein	-
DQL04_RS08350 (NCTC12062_01658)	-	1633347..1633571 (-)	225	WP_047236006.1	hypothetical protein	-
DQL04_RS08355 (NCTC12062_01659)	-	1633750..1635378 (+)	1629	WP_038431627.1	ABC transporter substrate-binding protein	-
DQL04_RS08360 (NCTC12062_01660)	-	1635491..1636468 (+)	978	WP_047236007.1	ABC transporter permease	-

Sequence

Protein

• Length: 422 a.a.
• Molecular weight: 46629.11 Da
• Isoelectric Point: 6.3774

>NTDB_id=1018709 DQL04_RS08330 WP_047236004.1 1630479..1631747(+) (rarA) [Streptococcus pyogenes strain NCTC12062]
MPDHLALRMRPKTISEVIGQKHLVGEGKIIRRMVEANRLSSMILYGPPGIGKTSIASAIAGTTKYAFRTFNATVDSKKRL
QEIAEEAKFSGGLVLLLDEIHRLDKTKQDFLLPLLENGTIIMIGATTENPFFSVTPAIRSRVQIFELEPLSNEDIKTAIQ
LAISDKERGFPFLVTIDDEALDFIVTATNGDLRSAYNSLDLAVMSTSPNEDSSRHISLETMENSLQRSYITMDKNGDGHY
DVLSALQKSIRGSDVNASLHYAARLVEAGDLPSLARRLTIIAYEDIGLANPDAQVHTVTALDAAQRIGFPEARILIANVV
IDLALSPKSNSAYLAMDAALADLRTSGNLPIPRHLRDGHYAGSKDLGNAKDYLYPHAYPEKWVKQQYLPDKLVGHHYFEA
NETGKYERALGSNKERIDKLLD

Nucleotide

• Length: 1269 bp

>NTDB_id=1018709 DQL04_RS08330 WP_047236004.1 1630479..1631747(+) (rarA) [Streptococcus pyogenes strain NCTC12062]
ATGCCTGATCATTTAGCGCTCAGAATGCGCCCCAAAACCATTTCAGAGGTCATCGGACAAAAACACCTTGTTGGCGAAGG
CAAAATCATCCGTCGCATGGTGGAAGCAAATAGACTATCGTCCATGATCCTCTATGGCCCTCCAGGAATCGGTAAAACTT
CCATTGCTTCTGCTATTGCAGGTACTACCAAGTACGCCTTTCGGACCTTTAATGCCACCGTTGATAGCAAAAAACGTCTC
CAAGAAATTGCGGAAGAAGCTAAATTTTCTGGTGGCTTGGTATTATTACTAGACGAGATTCATCGCCTTGACAAGACAAA
ACAAGATTTTCTTTTACCTTTACTTGAGAATGGCACCATTATCATGATTGGCGCAACCACTGAGAACCCCTTCTTTTCAG
TGACACCCGCTATCAGAAGCAGGGTCCAGATTTTTGAATTGGAACCACTTTCTAACGAGGATATTAAAACAGCCATTCAG
CTAGCAATTTCCGACAAAGAACGGGGATTTCCTTTTTTAGTGACAATTGATGATGAGGCGCTAGATTTCATTGTTACCGC
CACAAATGGAGACCTACGATCTGCTTATAATTCCTTGGATCTAGCAGTCATGTCTACTTCTCCTAATGAAGATAGTAGCC
GTCATATTAGTCTAGAGACAATGGAAAATAGTCTGCAGCGTAGTTATATTACCATGGATAAAAACGGGGACGGGCATTAT
GATGTTTTATCTGCCTTACAAAAATCCATTAGAGGTTCTGATGTCAATGCCAGCCTGCACTACGCCGCTCGTTTAGTAGA
AGCTGGAGACTTGCCTAGTTTAGCAAGACGATTGACCATTATTGCTTACGAAGATATTGGCTTAGCCAACCCTGACGCCC
AAGTTCATACCGTCACCGCACTAGATGCCGCTCAACGCATTGGTTTTCCAGAAGCTCGTATTCTTATCGCTAACGTGGTC
ATTGATTTGGCTCTATCACCTAAATCCAATTCAGCTTATTTAGCTATGGATGCAGCTTTAGCTGATTTGAGAACATCAGG
TAACCTCCCCATTCCAAGGCATCTTAGAGACGGGCATTACGCTGGCAGCAAGGACCTAGGCAATGCCAAAGATTACCTCT
ACCCACACGCCTACCCTGAAAAATGGGTCAAACAACAATACCTACCAGATAAATTAGTAGGACATCATTATTTTGAAGCC
AATGAAACCGGTAAATACGAACGCGCACTTGGTTCAAATAAAGAGCGTATTGATAAGCTCTTAGACTGA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (174-251)

• ATPase family associated with various cellular activities (AAA) (AAA) (42-144)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-415)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	59.33	99.052	0.588