Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   W903_RS05625 Genome accession   NZ_CP006910
Coordinates   1084201..1085934 (-) Length   577 a.a.
NCBI ID   WP_000647642.1    Uniprot ID   -
Organism   Streptococcus agalactiae CNCTC 10/84     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1079201..1090934
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  W903_RS05595 (W903_1150) - 1079270..1080106 (-) 837 WP_000455158.1 lipoate--protein ligase family protein -
  W903_RS05600 (W903_1151) coaB 1080260..1080946 (+) 687 WP_032456578.1 phosphopantothenate--cysteine ligase -
  W903_RS05605 (W903_1152) coaC 1080939..1081481 (+) 543 WP_000595815.1 phosphopantothenoylcysteine decarboxylase -
  W903_RS05610 (W903_1153) - 1081527..1082099 (+) 573 WP_000728786.1 ECF transporter S component -
  W903_RS05615 (W903_1154) - 1082209..1083927 (+) 1719 WP_000222544.1 phospho-sugar mutase -
  W903_RS05620 - 1083990..1084187 (-) 198 WP_000746859.1 hypothetical protein -
  W903_RS05625 (W903_1155) rcrQ 1084201..1085934 (-) 1734 WP_000647642.1 ABC transporter ATP-binding protein Regulator
  W903_RS05630 (W903_1156) - 1085935..1087656 (-) 1722 WP_038406078.1 ABC transporter ATP-binding protein -
  W903_RS05635 (W903_1157) - 1087668..1088270 (-) 603 WP_000472259.1 lysozyme family protein -
  W903_RS05640 (W903_1158) - 1088272..1089249 (-) 978 WP_000968654.1 nucleoid-associated protein -
  W903_RS05645 (W903_1159) glyA 1089254..1090510 (-) 1257 WP_000575549.1 serine hydroxymethyltransferase -

Sequence

Protein


Download         Length: 577 a.a.        Molecular weight: 64265.01 Da        Isoelectric Point: 8.2118

>NTDB_id=101738 W903_RS05625 WP_000647642.1 1084201..1085934(-) (rcrQ) [Streptococcus agalactiae CNCTC 10/84]
MKASHPKKIQKKLVQDLLSKKSLVGMALLGTVVQVCLTVYLPVLIGQAVDVVLSPHSMILLLPIMWKMIAVILANTIIQW
INPLLYNRLIFHYVASLRKAVMEKLNLLPIAYLDKRGIGDLISRVTTDTEQLSNGLLMVFNQFFVGLLTILVTIFSMAKI
DLLMLFLVLFLTPLSLFLARFIAKKSYHLYQNQTASRGRQTQFIEEMVSQESLIQAFSAQEESSDHFRTINQEYANFSQS
AIFYSSTVNPSTRFINSLIYGFLAGIGALRIMSGAFSVGQLITFLNYVNQYTKPFNDISSVLSEMQSALACAERLYSILE
ESSPNITGTEKLDSSTVKGQIDFKNVVFGYHKSKPLLNGINLHIPAGAKVAIVGPTGAGKSTLINLLMRFYEVDGGNILL
DGKPITDYEPSQLRQEIGMVLQETWLKSATIHDNIAYANPKASREEVIEAAKAANADFFIKQLPNGYDTYLEDAGDSLSQ
GQCQLLTIARIFLKLPRILILDEATSSIDTRTEVLVQEAFQMLMKGRTSFIIAHRLSTIQTADIILVMVSGEIVEVGNHS
ELMAQKGIYYQMQNAQK

Nucleotide


Download         Length: 1734 bp        

>NTDB_id=101738 W903_RS05625 WP_000647642.1 1084201..1085934(-) (rcrQ) [Streptococcus agalactiae CNCTC 10/84]
ATGAAAGCAAGTCATCCTAAAAAGATACAAAAAAAGCTTGTTCAAGATCTTCTTTCTAAAAAAAGCTTAGTAGGAATGGC
ATTATTAGGGACGGTTGTACAAGTTTGCCTCACTGTTTATTTGCCTGTTCTAATTGGACAAGCGGTAGACGTTGTATTAT
CGCCTCATTCTATGATATTATTGTTACCTATAATGTGGAAGATGATTGCAGTCATTTTAGCAAATACTATTATTCAATGG
ATTAATCCTCTGCTCTATAACCGCTTAATTTTTCATTATGTTGCTTCTTTAAGAAAGGCTGTAATGGAAAAGTTGAATCT
ATTGCCTATAGCTTACCTAGATAAACGTGGCATAGGTGACTTGATTAGTCGTGTGACTACCGATACGGAGCAATTATCAA
ATGGTTTATTAATGGTTTTTAACCAGTTCTTTGTTGGTTTATTAACTATTCTAGTTACTATTTTTAGTATGGCAAAGATT
GATTTATTAATGCTTTTTTTGGTATTATTTTTGACGCCTTTATCACTCTTTCTAGCCCGCTTTATTGCTAAAAAGAGTTA
TCACTTATATCAAAATCAAACGGCATCACGAGGACGACAAACTCAATTCATTGAAGAGATGGTGAGTCAAGAAAGCCTCA
TTCAAGCATTCAGTGCGCAAGAAGAAAGTAGTGATCATTTTAGGACTATTAATCAAGAGTATGCTAACTTTTCTCAATCA
GCAATTTTTTATTCTTCAACTGTTAATCCATCAACCCGATTTATCAATAGTTTGATTTATGGCTTCTTAGCTGGGATTGG
TGCCCTTCGCATTATGTCAGGGGCTTTTAGTGTTGGTCAATTAATCACTTTCTTAAATTATGTCAATCAATATACTAAGC
CATTTAATGACATCTCTTCCGTCCTGTCTGAGATGCAAAGTGCTCTGGCTTGTGCAGAACGCCTTTACTCTATTTTAGAA
GAATCGTCACCAAATATAACAGGTACAGAAAAACTTGATTCATCAACGGTCAAAGGTCAAATCGATTTTAAAAACGTTGT
TTTTGGTTATCATAAATCAAAACCACTATTAAATGGTATTAATTTACACATTCCAGCAGGAGCTAAGGTCGCTATTGTAG
GACCAACAGGTGCTGGGAAGTCTACTTTAATCAATTTATTAATGCGTTTCTATGAAGTTGACGGGGGAAATATCCTTTTA
GATGGTAAGCCTATTACTGATTATGAGCCATCACAATTAAGGCAAGAAATTGGAATGGTATTACAAGAAACGTGGTTAAA
AAGTGCTACGATTCACGATAACATTGCGTATGCCAATCCTAAAGCTAGCCGTGAAGAAGTGATAGAGGCTGCAAAAGCAG
CTAATGCAGATTTCTTTATCAAACAATTACCGAATGGATATGATACGTATTTAGAAGATGCTGGAGATTCGTTATCACAG
GGGCAATGTCAGCTATTGACAATTGCTCGTATTTTTCTTAAATTACCTAGAATATTGATATTAGATGAGGCGACATCGTC
TATAGATACTCGTACTGAAGTTCTTGTTCAAGAAGCATTCCAAATGTTGATGAAGGGGAGAACAAGCTTTATTATTGCAC
ATCGCTTATCTACCATTCAAACAGCAGATATTATTTTAGTTATGGTATCTGGTGAAATTGTAGAAGTGGGTAACCACTCT
GAATTAATGGCTCAAAAAGGTATTTATTATCAAATGCAAAATGCACAAAAGTAG

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(25-294)

ABC transporter (ABC_tran)

(357-506)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

36.991

97.92

0.362

Multiple sequence alignment