Detailed information NTG1017154

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: DQL05_RS07890
• Genome accession: NZ_LS483322
• Coordinates: 1554060..1555328 (+)
• Length: 422 a.a.
• NCBI ID: WP_109828860.1
• Uniprot ID: -
• Organism: Streptococcus pyogenes strain NCTC12066
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1549060..1560328

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQL05_RS07875 (NCTC12066_01560)	-	1549513..1551486 (+)	1974	WP_109828863.1	amidase family protein	-
DQL05_RS07880 (NCTC12066_01561)	pabB	1551671..1553428 (+)	1758	WP_109828862.1	aminodeoxychorismate synthase component I	-
DQL05_RS07885 (NCTC12066_01562)	-	1553461..1554027 (+)	567	WP_109828861.1	aminodeoxychorismate/anthranilate synthase component II	-
DQL05_RS07890 (NCTC12066_01563)	rarA	1554060..1555328 (+)	1269	WP_109828860.1	replication-associated recombination protein A	Machinery gene
DQL05_RS07905 (NCTC12066_01566)	smeZ	1555900..1556601 (+)	702	WP_109828641.1	streptococcal mitogenic exotoxin SmeZ	-
DQL05_RS09135 (NCTC12066_01567)	-	1557017..1557151 (-)	135	WP_011018269.1	hypothetical protein	-
DQL05_RS07910 (NCTC12066_01568)	-	1557330..1558958 (+)	1629	WP_109828859.1	ABC transporter substrate-binding protein	-
DQL05_RS07915 (NCTC12066_01569)	-	1559071..1560048 (+)	978	WP_109828858.1	ABC transporter permease	-

Sequence

Protein

• Length: 422 a.a.
• Molecular weight: 46641.12 Da
• Isoelectric Point: 6.3774

>NTDB_id=1017154 DQL05_RS07890 WP_109828860.1 1554060..1555328(+) (rarA) [Streptococcus pyogenes strain NCTC12066]
MPDHLALRMRPKTISEVIGQKHLVGEGKIIRRMVEANRLSSMILYGPPGIGKTSIASAIAGTTRYAFRTFNATIDSKKRL
QEIAEEAKFSGGLVLLLDEIHRLDKTKQDFLLPLLENGTIIMIGATTENPFFSVTPAIRSRVQIFELEPLSNEDIKTAIQ
LAISDKERGFPFLVTIDDEALDFIVTATNGDLRSAYNSLDLAVMSTSPNEDGSRHISLETMENSLQRSYITMDKNGDGHY
DVLSALQKSIRGSDVNASLHYAARLVEAGDLPSLARRLTIIAYEDIGLANPDAQVHTVTALDAAQRIGFPEARILIANVV
IDLALSPKSNSAYLAMDAALADLRTSGNLPIPRHLRDGHYAGSKDLGNAKDYLYPHAYPEKWVKQQYLPDKLVGHHYFEA
NETGKYERALGSNKERIDKLLD

Nucleotide

• Length: 1269 bp

>NTDB_id=1017154 DQL05_RS07890 WP_109828860.1 1554060..1555328(+) (rarA) [Streptococcus pyogenes strain NCTC12066]
ATGCCCGATCATTTAGCGCTCAGAATGCGCCCCAAAACCATTTCAGAGGTCATCGGACAAAAACACCTTGTTGGCGAAGG
CAAAATCATCCGTCGCATGGTGGAAGCAAATAGACTATCGTCCATGATCCTCTATGGACCACCAGGAATCGGTAAAACTT
CCATTGCTTCTGCTATTGCTGGTACTACTAGATATGCCTTTCGGACCTTTAATGCCACCATTGACAGCAAAAAACGTCTC
CAAGAAATTGCGGAAGAAGCTAAATTTTCTGGTGGCTTGGTATTATTACTAGACGAGATTCATCGCCTTGACAAGACAAA
ACAAGATTTTCTTTTACCTTTACTTGAGAACGGCACCATTATCATGATTGGCGCAACCACTGAGAATCCCTTCTTTTCAG
TGACACCCGCTATCAGAAGCAGGGTCCAGATTTTTGAATTGGAACCACTTTCTAACGAGGATATTAAAACAGCCATTCAG
CTAGCAATTTCCGACAAAGAACGGGGATTTCCTTTTTTAGTGACAATTGATGATGAGGCGCTAGATTTCATTGTTACCGC
CACAAATGGAGACCTACGATCTGCTTATAATTCCTTGGATCTAGCAGTCATGTCTACTTCTCCTAATGAAGATGGTAGCC
GTCATATTAGTCTAGAGACAATGGAAAATAGTCTGCAGCGTAGTTATATTACCATGGATAAAAACGGGGACGGGCATTAT
GATGTTTTATCTGCCTTACAAAAATCCATTAGAGGTTCTGATGTCAATGCTAGCCTGCACTACGCCGCTCGTTTAGTAGA
AGCTGGAGACTTGCCTAGTTTAGCAAGACGATTGACCATTATTGCTTACGAAGATATTGGCTTAGCCAACCCTGACGCCC
AAGTTCATACCGTCACCGCACTAGATGCCGCTCAACGCATTGGTTTTCCAGAAGCTCGTATTCTTATCGCTAACGTGGTC
ATTGATTTGGCTCTATCACCTAAATCCAATTCAGCTTATTTAGCTATGGATGCAGCTTTAGCTGATTTGAGAACATCAGG
TAACCTCCCCATTCCAAGGCATCTTAGAGACGGGCATTACGCTGGCAGCAAGGACCTAGGCAATGCCAAAGATTACCTCT
ACCCACACGCCTACCCTGAAAAATGGGTCAAACAACAATACCTACCAGATAAATTAGTAGGACATCATTATTTTGAAGCC
AATGAAACCGGTAAATACGAACGCGCACTTGGTTCAAATAAAGAGCGTATTGATAAGCTCTTAGACTGA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (174-251)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-415)

• ATPase family associated with various cellular activities (AAA) (AAA) (42-144)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	59.809	99.052	0.592