Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | ABXO38_RS02075 | Genome accession | NZ_CP160024 |
| Coordinates | 391540..391839 (+) | Length | 99 a.a. |
| NCBI ID | WP_000844413.1 | Uniprot ID | X5E258 |
| Organism | Staphylococcus aureus strain 23EV612 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 386540..396839
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABXO38_RS02035 (ABXO38_02035) | - | 386601..386804 (+) | 204 | WP_000087561.1 | YqgQ family protein | - |
| ABXO38_RS02040 (ABXO38_02040) | - | 386801..387787 (+) | 987 | WP_000161314.1 | ROK family glucokinase | - |
| ABXO38_RS02045 (ABXO38_02045) | - | 387787..388116 (+) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| ABXO38_RS02050 (ABXO38_02050) | - | 388113..388736 (+) | 624 | WP_373381115.1 | MBL fold metallo-hydrolase | - |
| ABXO38_RS02055 (ABXO38_02055) | comGA | 388788..389762 (+) | 975 | WP_000697220.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| ABXO38_RS02060 (ABXO38_02060) | comGB | 389734..390804 (+) | 1071 | WP_000776422.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| ABXO38_RS02065 (ABXO38_02065) | comGC | 390818..391129 (+) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| ABXO38_RS02070 (ABXO38_02070) | comGD | 391107..391553 (+) | 447 | WP_001788899.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| ABXO38_RS02075 (ABXO38_02075) | comGE | 391540..391839 (+) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| ABXO38_RS02080 (ABXO38_02080) | comGF | 391757..392254 (+) | 498 | WP_001789864.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| ABXO38_RS02085 (ABXO38_02085) | - | 392351..392497 (+) | 147 | WP_001789879.1 | hypothetical protein | - |
| ABXO38_RS02090 (ABXO38_02090) | - | 392487..393011 (+) | 525 | WP_001015121.1 | shikimate kinase | - |
| ABXO38_RS02095 (ABXO38_02095) | gcvT | 393170..394261 (+) | 1092 | WP_000093349.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| ABXO38_RS02100 (ABXO38_02100) | gcvPA | 394281..395627 (+) | 1347 | WP_000019687.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11093.20 Da Isoelectric Point: 9.9215
>NTDB_id=1017097 ABXO38_RS02075 WP_000844413.1 391540..391839(+) (comGE) [Staphylococcus aureus strain 23EV612]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=1017097 ABXO38_RS02075 WP_000844413.1 391540..391839(+) (comGE) [Staphylococcus aureus strain 23EV612]
ATGAAAAGCTATAAGTGTAAAGGTTCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGTTCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
86.842 |
100 |
1 |
| comGE | Staphylococcus aureus N315 |
98.99 |
100 |
0.99 |