Detailed information NTG1016734

Bioinformatically predicted

Overview

• Name: coiA
• Type: Machinery gene
• Locus tag: DQM44_RS06825
• Genome accession: NZ_LS483318
• Coordinates: 1327752..1328714 (-)
• Length: 320 a.a.
• NCBI ID: WP_044565456.1
• Uniprot ID: -
• Organism: Streptococcus dysgalactiae subsp. equisimilis strain NCTC5370
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1322752..1333714

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQM44_RS06805 (NCTC5370_01406)	-	1323910..1324533 (-)	624	WP_003055586.1	HAD-IA family hydrolase	-
DQM44_RS06810 (NCTC5370_01407)	-	1324533..1325075 (-)	543	WP_022554923.1	GNAT family N-acetyltransferase	-
DQM44_RS06815 (NCTC5370_01408)	-	1325205..1325753 (-)	549	WP_044565454.1	NADPH-dependent FMN reductase	-
DQM44_RS06820 (NCTC5370_01409)	pepF	1325939..1327741 (-)	1803	WP_003060489.1	oligoendopeptidase F	Regulator
DQM44_RS06825 (NCTC5370_01410)	coiA	1327752..1328714 (-)	963	WP_044565456.1	competence protein CoiA family protein	Machinery gene
DQM44_RS06830 (NCTC5370_01411)	-	1328826..1329986 (-)	1161	WP_046177844.1	MFS transporter	-
DQM44_RS06835 (NCTC5370_01413)	-	1330078..1330794 (-)	717	Protein_1292	pseudouridine synthase	-
DQM44_RS06840 (NCTC5370_01414)	nagB	1330898..1331611 (-)	714	WP_003056370.1	glucosamine-6-phosphate deaminase	-
DQM44_RS06845 (NCTC5370_01415)	queA	1331810..1332838 (+)	1029	WP_022554929.1	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	-

Sequence

Protein

• Length: 320 a.a.
• Molecular weight: 37673.08 Da
• Isoelectric Point: 10.1798

>NTDB_id=1016734 DQM44_RS06825 WP_044565456.1 1327752..1328714(-) (coiA) [Streptococcus dysgalactiae subsp. equisimilis strain NCTC5370]
MLRVLTALTNENQVISLLVQPNPQKQPFRCPACGSPVRLRQGKIIRPHFAHITLANCHFQTENESQEHLHLKAKIYTSLI
KTEKVCVEKYLPELQQFPDLWVNDKLALEIQCSPIPIERLVARTQAYQKHGYEVRWLLGKKLWLKNRLTAFQKQCLYFSS
RLGFHLWELDTAAHLLRLKYLIHEDLFDKVSYLTKTISLDNNIMESLRIPYHQSKLCSYQKPMAKSLSIAIQRALLAKHP
KWLRRQERAYLAGYNLLMLPVEAFYPQWRPVQSATGFCQIKENLHDYNKSFKAYYKKEGNKKVQTLFSPQYYVKIVSNRK

Nucleotide

• Length: 963 bp

>NTDB_id=1016734 DQM44_RS06825 WP_044565456.1 1327752..1328714(-) (coiA) [Streptococcus dysgalactiae subsp. equisimilis strain NCTC5370]
GTGTTGAGAGTATTAACAGCTTTAACCAATGAGAATCAGGTGATTTCTTTGCTAGTACAGCCTAATCCTCAGAAGCAACC
ATTTCGTTGTCCAGCTTGCGGATCTCCTGTTCGCTTGCGTCAGGGAAAAATTATACGCCCTCATTTTGCACACATCACAT
TAGCTAATTGTCATTTTCAAACAGAAAATGAGTCCCAAGAACATTTGCATTTGAAAGCAAAAATATACACAAGTCTGATA
AAAACAGAAAAGGTTTGTGTGGAAAAGTATCTTCCCGAATTACAACAATTTCCAGATCTTTGGGTGAATGATAAGTTAGC
CTTAGAAATTCAGTGCAGCCCTATACCAATTGAGCGTTTGGTGGCACGTACACAAGCCTATCAGAAACATGGTTACGAGG
TTCGTTGGCTGTTGGGAAAGAAACTCTGGCTTAAAAATCGTTTAACGGCCTTCCAAAAACAATGTCTTTACTTTTCGTCT
CGTTTAGGCTTTCATTTGTGGGAGTTGGATACAGCTGCACATCTGTTGCGTCTAAAATACTTAATTCATGAAGATTTATT
TGACAAAGTGAGTTACCTAACCAAAACCATTTCTTTGGATAACAATATCATGGAAAGTTTGCGGATTCCTTATCACCAAA
GCAAGCTCTGTTCTTACCAAAAACCTATGGCCAAGTCTCTTTCGATAGCCATTCAAAGGGCTTTATTAGCGAAGCACCCT
AAATGGTTACGTCGTCAGGAAAGAGCCTATTTAGCTGGCTATAATTTACTCATGTTGCCAGTAGAGGCCTTCTATCCTCA
ATGGCGTCCCGTACAGTCGGCTACTGGTTTTTGTCAAATCAAAGAGAATCTCCATGATTATAATAAGAGTTTTAAAGCTT
ATTACAAAAAAGAAGGGAATAAGAAGGTGCAAACGCTTTTTTCACCTCAATATTATGTTAAAATAGTTAGTAATAGAAAA
TGA

Domains

Predicted by InterProScan.

• Competence protein CoiA-like family (CoiA_nuc) (19-268)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
coiA	Streptococcus mitis NCTC 12261	42.581	96.875	0.413
coiA	Streptococcus pneumoniae Rx1	40.968	96.875	0.397
coiA	Streptococcus pneumoniae D39	40.968	96.875	0.397
coiA	Streptococcus pneumoniae R6	40.968	96.875	0.397
coiA	Streptococcus pneumoniae TIGR4	40.968	96.875	0.397
coiA	Lactococcus lactis subsp. cremoris KW2	38.037	100	0.388