Detailed information NTG1016663

Bioinformatically predicted

Overview

• Name: endA
• Type: Machinery gene
• Locus tag: ABG809_RS07380
• Genome accession: NZ_CP159893
• Coordinates: 1504014..1504877 (-)
• Length: 287 a.a.
• NCBI ID: WP_003099993.1
• Uniprot ID: A0A3L8GIC3
• Organism: Streptococcus iniae strain QMA0177
• Function: cleavage of dsDNA into ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1499014..1509877

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABG809_RS07360 (ABG809_07360)	-	1499269..1499649 (-)	381	WP_003099988.1	OsmC family protein	-
ABG809_RS07365 (ABG809_07365)	pheT	1499722..1502127 (-)	2406	WP_003099989.1	phenylalanine--tRNA ligase subunit beta	-
ABG809_RS07370 (ABG809_07370)	-	1502143..1502667 (-)	525	WP_003099991.1	N-acetyltransferase	-
ABG809_RS07375 (ABG809_07375)	pheS	1502680..1503722 (-)	1043	Protein_1407	phenylalanine--tRNA ligase subunit alpha	-
ABG809_RS07380 (ABG809_07380)	endA	1504014..1504877 (-)	864	WP_003099993.1	DNA/RNA non-specific endonuclease	Machinery gene
ABG809_RS07385 (ABG809_07385)	-	1504908..1505096 (-)	189	WP_003099995.1	DNA-directed RNA polymerase subunit beta	-
ABG809_RS07390 (ABG809_07390)	murA	1505100..1506371 (-)	1272	WP_003099997.1	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	-
ABG809_RS07395 (ABG809_07395)	-	1506437..1506673 (-)	237	WP_071794729.1	DUF1146 family protein	-
ABG809_RS07400 (ABG809_07400)	-	1506749..1507165 (-)	417	WP_003100001.1	F0F1 ATP synthase subunit epsilon	-
ABG809_RS07405 (ABG809_07405)	atpD	1507178..1508584 (-)	1407	WP_003100002.1	F0F1 ATP synthase subunit beta	-
ABG809_RS07410 (ABG809_07410)	-	1508700..1509575 (-)	876	WP_003100004.1	F0F1 ATP synthase subunit gamma	-

Sequence

Protein

• Length: 287 a.a.
• Molecular weight: 31715.35 Da
• Isoelectric Point: 9.3865

>NTDB_id=1016663 ABG809_RS07380 WP_003099993.1 1504014..1504877(-) (endA) [Streptococcus iniae strain QMA0177]
MSPKTKQSQKINLLLFLLVLVGLFYLIDSKEGEENNPIRAFYQSVMGASNQTSQKESSNPDTPSYALASSVLTEKVKRQL
GSKVEWNGNGAFVINDNSTNLDAKVSSAPYAHNQTRLLSGKKLPTVANALLAKSTRQYRDRNETGNGYSYWKPAGWHQIH
GLSGKYDHAVDRGHLLGYALVGGLKGFDASTSNSDNIATQLSWANQAMDSDSTGQNYYETKIRRALDKNKRVRYRVTLIY
EADNILASGSHLEAKSDDGSLEFNVFVPNVQKGLEVDYQTGQITVSH

Nucleotide

• Length: 864 bp

>NTDB_id=1016663 ABG809_RS07380 WP_003099993.1 1504014..1504877(-) (endA) [Streptococcus iniae strain QMA0177]
ATGTCACCAAAGACAAAACAAAGTCAAAAAATCAATCTATTATTGTTTCTGCTTGTGCTCGTTGGCTTATTCTATTTGAT
TGATAGTAAAGAAGGGGAAGAGAATAATCCTATTCGAGCCTTTTATCAATCAGTGATGGGAGCTTCCAATCAAACTAGCC
AAAAAGAATCAAGCAATCCTGATACACCAAGTTATGCCTTGGCATCTTCGGTTTTAACAGAAAAAGTAAAAAGACAACTT
GGTTCGAAAGTTGAGTGGAATGGTAATGGTGCATTTGTCATCAATGATAACAGTACCAATTTGGATGCAAAAGTATCCAG
TGCTCCCTATGCTCACAATCAAACCAGACTCTTATCAGGGAAAAAGCTTCCAACAGTCGCCAATGCTTTACTTGCCAAAT
CAACAAGGCAATACCGAGACCGAAACGAGACCGGAAATGGCTACTCTTATTGGAAACCTGCTGGTTGGCACCAGATTCAT
GGTTTATCAGGAAAATATGATCACGCTGTGGACCGTGGGCATTTATTAGGCTATGCTTTAGTGGGAGGTCTTAAAGGATT
TGATGCCTCTACAAGCAATAGCGATAACATAGCAACGCAATTATCCTGGGCTAACCAAGCGATGGATAGTGATTCCACTG
GCCAAAATTATTATGAAACAAAAATCAGACGTGCATTGGACAAGAATAAGCGTGTCCGTTACCGTGTTACCCTCATTTAC
GAGGCTGATAATATATTAGCAAGTGGAAGCCATTTAGAAGCAAAATCAGATGACGGCAGTTTAGAATTTAACGTTTTTGT
GCCAAATGTTCAAAAAGGTCTAGAAGTTGACTATCAAACAGGACAAATAACAGTCAGTCACTAA

Domains

Predicted by InterproScan.

• DNA/RNA non-specific endonuclease (Endonuclease_NS) (95-245)

3D structure

• AlphaFold DB: A0A3L8GIC3

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
endA	Streptococcus pneumoniae Rx1	63.559	82.23	0.523
endA	Streptococcus pneumoniae D39	63.559	82.23	0.523
endA	Streptococcus pneumoniae R6	63.559	82.23	0.523
endA	Streptococcus pneumoniae TIGR4	63.559	82.23	0.523