Detailed information NTG1016489

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: DQL11_RS08295
• Genome accession: NZ_LS483315
• Coordinates: 1627089..1628357 (+)
• Length: 422 a.a.
• NCBI ID: WP_111704800.1
• Uniprot ID: -
• Organism: Streptococcus pyogenes strain NCTC12059
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1622089..1633357

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQL11_RS08270 (NCTC12059_01645)	-	1622703..1623173 (-)	471	WP_011285205.1	DUF3013 family protein	-
DQL11_RS08280 (NCTC12059_01647)	-	1623419..1624552 (-)	1134	WP_111704798.1	ISAs1-like element IS1548 family transposase	-
DQL11_RS08285 (NCTC12059_01648)	pabB	1624700..1626457 (+)	1758	WP_111704799.1	aminodeoxychorismate synthase component I	-
DQL11_RS08290 (NCTC12059_01649)	-	1626490..1627056 (+)	567	WP_012561034.1	aminodeoxychorismate/anthranilate synthase component II	-
DQL11_RS08295 (NCTC12059_01650)	rarA	1627089..1628357 (+)	1269	WP_111704800.1	replication-associated recombination protein A	Machinery gene
DQL11_RS08310 (NCTC12059_01653)	-	1628929..1629630 (+)	702	WP_047236005.1	exotoxin beta-grasp domain-containing protein	-
DQL11_RS08315 (NCTC12059_01654)	-	1629956..1630180 (-)	225	WP_047236006.1	hypothetical protein	-
DQL11_RS08320 (NCTC12059_01655)	-	1630359..1631987 (+)	1629	WP_002993593.1	ABC transporter substrate-binding protein	-
DQL11_RS08325 (NCTC12059_01656)	-	1632100..1633077 (+)	978	WP_111686398.1	ABC transporter permease	-

Sequence

Protein

• Length: 422 a.a.
• Molecular weight: 46655.15 Da
• Isoelectric Point: 6.3774

>NTDB_id=1016489 DQL11_RS08295 WP_111704800.1 1627089..1628357(+) (rarA) [Streptococcus pyogenes strain NCTC12059]
MPDHLALRMRPKTISEVIGQKHLVGEGKIIRRMVEANRLSSMILYGPPGIGKTSIASAIAGTTRYAFRTFNATIDSKKRL
QEIAEEAKFSGGLVLLLDEIHRLDKTKQDFLLPLLENGTIIMIGATTENPFFSVTPAIRSRVQIFELEPLSNEDIKTAIQ
LAISDKERGFPFLVTIDDEALDFIVTATNGDLRSAYNSLDLAVMSTSPNEDSSRHISLETMENSLQRSYITMDKNGDGHY
DVLSALQKAIRGSDVNASLHYAARLVEAGDLPSLARRLTIIAYEDIGLANPDAQVHTVTALDAAQRIGFPEARILIANVV
IDLALSPKSNSAYLAMDAALADLRTSGNLPIPRHLRDGHYAGSKDLGNAKDYLYPHAYPEKWVKQQYLPDKLVGHHYFEA
NETGKYERALGSNKERIDKLLD

Nucleotide

• Length: 1269 bp

>NTDB_id=1016489 DQL11_RS08295 WP_111704800.1 1627089..1628357(+) (rarA) [Streptococcus pyogenes strain NCTC12059]
ATGCCTGATCATTTAGCGCTCAGAATGCGCCCCAAAACCATTTCAGAGGTCATCGGACAAAAACACCTTGTTGGCGAAGG
CAAAATCATCCGTCGCATGGTGGAAGCAAATAGACTATCGTCCATGATCCTCTATGGCCCTCCAGGAATCGGTAAAACTT
CCATTGCTTCTGCTATTGCTGGTACTACTAGATATGCCTTTCGGACCTTTAATGCCACCATTGACAGCAAAAAACGTCTC
CAAGAAATTGCGGAAGAAGCTAAATTTTCTGGTGGCTTGGTATTATTACTAGACGAGATTCATCGCCTTGACAAGACAAA
ACAAGATTTTCTTTTACCTTTACTTGAGAACGGCACCATTATCATGATTGGCGCAACCACTGAGAACCCCTTCTTTTCAG
TGACCCCCGCTATCAGAAGCAGGGTCCAGATTTTTGAATTGGAACCACTTTCTAACGAGGATATTAAAACAGCCATTCAG
CTAGCAATTTCCGACAAAGAACGGGGATTTCCTTTTTTAGTGACAATTGATGATGAGGCGCTAGATTTCATTGTTACCGC
CACAAATGGAGACCTACGATCTGCTTATAATTCCTTGGATCTAGCAGTCATGTCTACTTCTCCTAATGAAGATAGTAGCC
GTCATATTAGTCTAGAGACAATGGAAAATAGTCTGCAGCGTAGTTATATTACCATGGATAAAAACGGGGACGGGCATTAT
GATGTTTTATCTGCCTTACAAAAAGCTATTCGCGGCTCCGATGTCAATGCCAGCCTGCACTACGCCGCTCGTTTAGTAGA
AGCTGGAGACTTGCCTAGTTTAGCAAGACGATTGACCATTATTGCTTACGAAGATATTGGCTTAGCCAACCCTGACGCCC
AAGTTCATACCGTCACCGCACTAGATGCCGCTCAACGCATTGGTTTTCCAGAAGCTCGTATTCTTATCGCTAACGTGGTC
ATTGATTTGGCTCTATCACCTAAATCCAATTCAGCTTATTTAGCTATGGATGCAGCTTTAGCTGATTTGAGAACATCAGG
TAACCTCCCCATTCCAAGGCATCTTAGAGACGGGCATTACGCTGGCAGCAAGGACCTAGGCAATGCCAAAGATTACCTCT
ACCCACACGCCTACCCTGAAAAATGGGTCAAACAACAATACCTACCAGATAAATTAGTAGGACATCATTATTTTGAAGCC
AATGAAACCGGTAAATACGAACGCGCACTTGGTTCAAATAAAGAGCGTATTGATAAGCTCTTAGACTGA

Domains

Predicted by InterProScan.

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-415)

• ATPase family associated with various cellular activities (AAA) (AAA) (42-144)

• AAA C-terminal domain (AAA_assoc_2) (174-251)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	59.33	99.052	0.588