Detailed information NTG1013603

Bioinformatically predicted

Overview

• Name: comEA
• Type: Machinery gene
• Locus tag: ABVR75_RS06020
• Genome accession: NZ_CP159464
• Coordinates: 1168359..1169066 (-)
• Length: 235 a.a.
• NCBI ID: WP_226474265.1
• Uniprot ID: -
• Organism: Latilactobacillus sakei subsp. sakei strain CBA3649
• Function: dsDNA binding to the cell surface (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1163359..1174066

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABVR75_RS05990 (ABVR75_05990)	rpsO	1163658..1163927 (-)	270	WP_011374766.1	30S ribosomal protein S15	-
ABVR75_RS05995 (ABVR75_05995)	rpsT	1164206..1164460 (+)	255	WP_011374767.1	30S ribosomal protein S20	-
ABVR75_RS06000 (ABVR75_06000)	holA	1164528..1165556 (-)	1029	WP_025015735.1	DNA polymerase III subunit delta	-
ABVR75_RS06005 (ABVR75_06005)	comEC	1165553..1166488 (-)	936	WP_353891321.1	ComEC/Rec2 family competence protein	Machinery gene
ABVR75_RS06010 (ABVR75_06010)	comEC	1166491..1167615 (-)	1125	WP_353891322.1	ComEC/Rec2 family competence protein	Machinery gene
ABVR75_RS06015 (ABVR75_06015)	-	1167813..1168301 (-)	489	WP_011374770.1	ComE operon protein 2	-
ABVR75_RS06020 (ABVR75_06020)	comEA	1168359..1169066 (-)	708	WP_226474265.1	helix-hairpin-helix domain-containing protein	Machinery gene
ABVR75_RS06025 (ABVR75_06025)	-	1169140..1170186 (-)	1047	WP_035145546.1	SepM family pheromone-processing serine protease	-
ABVR75_RS06030 (ABVR75_06030)	coaD	1170188..1170685 (-)	498	WP_025015732.1	pantetheine-phosphate adenylyltransferase	-
ABVR75_RS06035 (ABVR75_06035)	rsmD	1170698..1171252 (-)	555	WP_016265217.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
ABVR75_RS06040 (ABVR75_06040)	-	1171257..1171547 (-)	291	WP_279850973.1	YlbG family protein	-
ABVR75_RS06045 (ABVR75_06045)	-	1171571..1172659 (-)	1089	WP_011374776.1	CAP-associated domain-containing protein	-
ABVR75_RS06050 (ABVR75_06050)	-	1172670..1173857 (-)	1188	WP_353891323.1	FtsW/RodA/SpoVE family cell cycle protein	-

Sequence

Protein

• Length: 235 a.a.
• Molecular weight: 26122.75 Da
• Isoelectric Point: 9.7683

>NTDB_id=1013603 ABVR75_RS06020 WP_226474265.1 1168359..1169066(-) (comEA) [Latilactobacillus sakei subsp. sakei strain CBA3649]
MMWQDYWQRYRRFWWVPCLVLLGIITGGFYWHQTQQKQKVTHNEQLLATSASKIKPATKKTHQAATKKKGGFVDIKGAVA
YPGIYPITVSETRLFEVLKNAGGPTDAADTKRLNLAQKLTDQLIIYIPKKGEVVTDQELIQAPQQIATTSERTPEQASTG
TSANASSASDTAKIDLNQADSTQLQTLNGIGPKKAEQIIAYRDEQGKFKQIEDLQKVGGIGPKTFEQLQSQICVN

Nucleotide

• Length: 708 bp

>NTDB_id=1013603 ABVR75_RS06020 WP_226474265.1 1168359..1169066(-) (comEA) [Latilactobacillus sakei subsp. sakei strain CBA3649]
ATGATGTGGCAAGATTATTGGCAGCGATATCGGCGTTTTTGGTGGGTGCCTTGCTTAGTGCTATTGGGGATCATCACGGG
TGGCTTTTATTGGCATCAAACGCAACAAAAACAAAAAGTAACGCATAATGAGCAACTGCTAGCAACCAGTGCGTCTAAAA
TAAAACCTGCTACTAAGAAAACACACCAAGCGGCAACCAAGAAAAAAGGCGGTTTTGTCGATATAAAAGGTGCTGTGGCT
TATCCGGGAATTTATCCGATCACAGTCTCTGAAACGCGCTTATTTGAGGTGCTCAAAAATGCAGGTGGTCCGACTGATGC
GGCTGATACCAAGCGGCTTAATTTAGCCCAAAAATTAACCGATCAACTGATTATTTATATTCCGAAAAAAGGAGAGGTGG
TTACTGATCAAGAACTCATTCAAGCGCCACAACAAATTGCAACGACCAGTGAGCGTACGCCAGAACAAGCATCAACTGGG
ACAAGTGCGAATGCATCGAGCGCGAGTGACACTGCTAAAATCGATTTGAATCAGGCTGATAGTACGCAGCTTCAGACCCT
CAATGGCATTGGCCCCAAGAAAGCTGAACAAATAATTGCTTATCGTGATGAACAAGGAAAATTTAAACAGATTGAAGATC
TACAAAAAGTCGGCGGGATTGGTCCGAAGACGTTTGAACAATTGCAATCACAAATTTGTGTGAATTAG

Domains

Predicted by InterproScan.

• SLBB domain (SLBB) (73-124)

• Helix-hairpin-helix motif (HHH_3) (172-233)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEA	Latilactobacillus sakei subsp. sakei 23K	97.021	100	0.97