Detailed information NTG1011281

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: ABR335_RS07370
• Genome accession: NZ_CP158453
• Coordinates: 1558309..1560732 (+)
• Length: 807 a.a.
• NCBI ID: WP_014097912.1
• Uniprot ID: A0AAU7WKF3
• Organism: Heyndrickxia faecalis strain TCI803
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1553309..1565732

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABR335_RS07335 (ABR335_07335)	-	1553422..1553571 (+)	150	Protein_1369	hypothetical protein	-
ABR335_RS07340 (ABR335_07340)	-	1553573..1553767 (+)	195	WP_350346687.1	hypothetical protein	-
ABR335_RS07345 (ABR335_07345)	-	1553885..1554238 (+)	354	WP_230951703.1	hypothetical protein	-
ABR335_RS07350 (ABR335_07350)	-	1554552..1554971 (+)	420	WP_014097908.1	cysteine metabolism transcriptional regulator CymR	-
ABR335_RS07355 (ABR335_07355)	-	1554988..1556133 (+)	1146	WP_350346688.1	cysteine desulfurase family protein	-
ABR335_RS07360 (ABR335_07360)	mnmA	1556149..1557264 (+)	1116	WP_014097910.1	tRNA 2-thiouridine(34) synthase MnmA	-
ABR335_RS07365 (ABR335_07365)	-	1557630..1558298 (+)	669	WP_350346689.1	tetratricopeptide repeat protein	-
ABR335_RS07370 (ABR335_07370)	recD2	1558309..1560732 (+)	2424	WP_014097912.1	ATP-dependent RecD-like DNA helicase	Machinery gene
ABR335_RS07375 (ABR335_07375)	-	1560899..1561243 (-)	345	Protein_1377	Glu/Leu/Phe/Val dehydrogenase dimerization domain-containing protein	-
ABR335_RS07380 (ABR335_07380)	-	1561575..1561679 (+)	105	WP_014097915.1	AsnC family transcriptional regulator	-
ABR335_RS07385 (ABR335_07385)	-	1561686..1562036 (+)	351	WP_014097916.1	Lrp/AsnC family transcriptional regulator	-
ABR335_RS07390 (ABR335_07390)	-	1562075..1562515 (-)	441	WP_014097917.1	YndM family protein	-
ABR335_RS07395 (ABR335_07395)	-	1562675..1562887 (+)	213	WP_035188196.1	hypothetical protein	-
ABR335_RS07400 (ABR335_07400)	-	1562905..1563036 (+)	132	WP_014097919.1	DUF3918 family protein	-
ABR335_RS07405 (ABR335_07405)	-	1563298..1564389 (+)	1092	WP_014097920.1	AI-2E family transporter	-

Sequence

Protein

• Length: 807 a.a.
• Molecular weight: 90693.73 Da
• Isoelectric Point: 4.8812

>NTDB_id=1011281 ABR335_RS07370 WP_014097912.1 1558309..1560732(+) (recD2) [Heyndrickxia faecalis strain TCI803]
MEKQHAMDLFQDEENFIKGKHLATIFHNEQNLYSVIRVRVEETNTGLEDKETVITGYFPRIHEQETYTFFGKMQEHPKFG
PQFQANRFQKDIPNTKQGVIEYLSSDLFNGIGKKTAERIVGVLGENAISKILENPAALDEVPKLAPEKAQLIRDTLVEHQ
GLERVMIGLAQYGFGPQIAMRIYQVYEDEALEKIAQNPYQLVDDIKGIGFGRADELGRQLGISGTHPHRIQAGCCYMLEM
ESMQHGHVYVLKEELAQDVKALLEEYQHVEIPMDLIENELVKLQEESKVIMEEDKVYLPSLYFSEKGIVSNIERIMSQTE
YAEQFPESEFLLALGSLEERIGVEYAPSQKEAIQKALMSPMMILTGGPGTGKTTVIKGIVELYGELHGVSLDPQTYKKDE
VFPIVLAAPTGRAAKRMAESTGLPAMTIHRLLGMTGMEDLDDSEERQVEGKLVIIDEMSMVDTWLANQLLKALPDEIQVI
MVGDEDQLPSVGPGQVLKDLLKSNAIPVVRLTDIYRQKDGSSIIELAHHVKNGRIPENIFQMQADRSFIRCSSGQVAEAV
EKVVKSAKRKGYTAKDIQVLAPMYRGPAGIDRLNSLLQNIFNPNENGARKELKHGDAVYRIGDKVLQLVNQPEHGVYNGD
IGEIVSLFTAKENTEKQDMLIVSFDGIEVTYTKPDFNQITLAYCCSIHKSQGSEFPVVILPVVRSYYRMLRRNLLYTAIT
RSKKILILLGEEPAFRMGVEREDDQKRKTTLCEKLAEALKTAQKEAGTETALSLTEENWDRVDPMIGMAGITPYTYAEEG
QTASQPD

Nucleotide

• Length: 2424 bp

>NTDB_id=1011281 ABR335_RS07370 WP_014097912.1 1558309..1560732(+) (recD2) [Heyndrickxia faecalis strain TCI803]
TTGGAAAAACAGCATGCGATGGATTTATTCCAGGACGAGGAAAATTTTATAAAAGGAAAGCATCTCGCGACCATCTTCCA
TAACGAGCAAAATTTGTATTCCGTCATCCGTGTGCGGGTGGAAGAGACCAATACCGGGCTGGAAGATAAGGAAACGGTGA
TTACCGGCTATTTTCCGCGCATCCATGAACAGGAAACGTACACCTTTTTTGGAAAAATGCAGGAACACCCGAAATTCGGC
CCCCAGTTCCAGGCAAATCGCTTCCAAAAAGACATCCCCAATACAAAGCAGGGCGTTATTGAGTATCTTTCCAGTGATTT
ATTTAACGGCATCGGCAAAAAAACGGCGGAGCGGATCGTTGGCGTGCTCGGTGAAAATGCGATCAGCAAAATATTGGAAA
ATCCCGCCGCCCTTGACGAAGTACCGAAACTGGCACCGGAAAAAGCGCAGCTGATCCGTGATACGTTAGTTGAACATCAG
GGGCTTGAACGTGTTATGATCGGGCTTGCGCAATACGGTTTCGGGCCGCAGATTGCGATGCGCATTTACCAGGTTTACGA
GGATGAGGCGCTCGAAAAAATTGCGCAAAATCCATACCAGCTCGTTGATGATATTAAAGGCATCGGTTTCGGGCGGGCCG
ATGAACTCGGCCGGCAGCTCGGCATCAGCGGGACGCATCCGCACCGCATCCAGGCCGGCTGCTGTTACATGCTGGAAATG
GAAAGCATGCAGCACGGTCATGTGTACGTCCTGAAAGAAGAACTTGCACAGGATGTCAAAGCCCTTTTGGAAGAATACCA
GCATGTTGAAATCCCGATGGACTTGATTGAAAATGAGCTGGTGAAACTTCAGGAAGAGAGCAAAGTCATCATGGAAGAAG
ACAAAGTCTATCTTCCGTCCCTCTATTTTTCGGAAAAAGGAATCGTTTCCAATATTGAGCGGATTATGTCGCAAACCGAG
TATGCGGAACAGTTCCCGGAATCTGAATTCCTGCTTGCTTTAGGCAGTCTTGAGGAACGGATCGGGGTCGAGTATGCCCC
GTCGCAAAAGGAAGCCATCCAAAAAGCGCTGATGAGTCCGATGATGATTTTAACGGGCGGGCCCGGCACAGGGAAAACAA
CGGTCATTAAAGGGATTGTGGAACTGTACGGTGAATTGCACGGCGTCTCGCTTGACCCGCAAACCTATAAAAAAGATGAG
GTATTTCCGATTGTTCTCGCGGCGCCGACAGGGAGGGCCGCGAAAAGAATGGCGGAGTCAACTGGTCTGCCGGCGATGAC
GATCCACCGCCTGCTCGGCATGACCGGCATGGAGGACCTGGACGATTCAGAGGAACGGCAAGTAGAAGGCAAGCTTGTCA
TCATTGATGAAATGTCGATGGTCGATACATGGCTTGCGAACCAGCTGTTAAAGGCGCTGCCGGATGAAATCCAAGTCATC
ATGGTTGGGGATGAAGACCAGCTGCCGTCCGTCGGTCCAGGCCAGGTGCTGAAAGATTTATTGAAATCGAACGCCATTCC
GGTTGTTAGGCTGACAGACATATACAGGCAGAAAGATGGTTCTTCGATTATTGAACTGGCCCACCATGTTAAAAATGGCC
GTATTCCGGAAAATATTTTTCAAATGCAGGCAGACCGTTCGTTTATCCGCTGTTCTTCCGGGCAGGTGGCGGAAGCGGTG
GAAAAAGTGGTGAAAAGCGCGAAACGGAAAGGCTATACGGCAAAAGACATTCAGGTGCTGGCGCCGATGTACAGGGGGCC
GGCCGGCATTGACCGTCTGAACAGCCTGTTGCAAAATATTTTTAATCCGAATGAGAACGGGGCCCGCAAAGAGCTGAAGC
ACGGGGACGCGGTTTACCGGATCGGCGATAAGGTACTGCAGCTTGTCAACCAGCCGGAACACGGGGTGTATAACGGCGAT
ATCGGCGAGATTGTCTCGCTTTTTACCGCAAAAGAAAATACGGAAAAACAAGATATGCTCATCGTTTCTTTTGATGGGAT
TGAAGTGACGTATACGAAGCCAGATTTCAATCAGATTACGCTTGCGTATTGCTGTTCGATCCATAAATCGCAAGGAAGCG
AGTTTCCGGTCGTAATTTTGCCGGTTGTCCGCAGCTATTACCGGATGCTGCGCCGAAACTTGCTGTATACGGCGATTACA
AGGAGCAAAAAAATTTTAATTCTGCTTGGCGAAGAACCGGCTTTCCGGATGGGTGTGGAAAGGGAAGATGACCAAAAGCG
GAAGACGACACTGTGTGAAAAACTGGCTGAAGCATTAAAAACGGCACAAAAAGAGGCAGGGACGGAGACAGCCCTGTCCT
TAACAGAAGAAAATTGGGACCGGGTCGACCCGATGATTGGCATGGCGGGCATTACCCCGTACACGTACGCAGAAGAAGGA
CAGACTGCGTCCCAACCGGATTAA

Domains

Predicted by InterproScan.

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (593-664)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (682-728)

• Helix-hairpin-helix containing domain (HHH_RecD2) (158-249)

• AAA domain (AAA_30) (345-553)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	60.772	99.504	0.605