Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   T303_RS03810 Genome accession   NZ_CP006819
Coordinates   694363..696150 (+) Length   595 a.a.
NCBI ID   WP_024704018.1    Uniprot ID   -
Organism   Streptococcus thermophilus ASCC 1275     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 689363..701150
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  T303_RS03805 (T303_03830) rcrP 692614..694350 (+) 1737 WP_024704017.1 ABC transporter ATP-binding protein Regulator
  T303_RS03810 (T303_03835) rcrQ 694363..696150 (+) 1788 WP_024704018.1 ABC transporter ATP-binding protein Regulator
  T303_RS03815 (T303_03840) queA 696248..697291 (-) 1044 WP_011680873.1 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA -
  T303_RS03820 (T303_03845) - 697441..698142 (+) 702 WP_024704019.1 glucosamine-6-phosphate deaminase -
  T303_RS03825 (T303_03850) - 698308..699603 (-) 1296 WP_024704020.1 GHKL domain-containing protein -
  T303_RS03830 (T303_03855) - 699603..700313 (-) 711 WP_011680876.1 LytTR family DNA-binding domain-containing protein -

Sequence

Protein


Download         Length: 595 a.a.        Molecular weight: 66604.75 Da        Isoelectric Point: 5.2494

>NTDB_id=101077 T303_RS03810 WP_024704018.1 694363..696150(+) (rcrQ) [Streptococcus thermophilus ASCC 1275]
MKDNKKKTTHSSSFGRLWSYLQVYRFPLYLAIFLKIISVIMSVIEPVVIGLAITELTKNTLDIIKGVAGAHINVSYVGLV
LVFYLLRGLIYELASYYSNYFMTNAVQATVQDMRNEMIEKINRTSVSYFDKQQFGDLLGRFTSDVETVSNALQQSFLQVV
NAIFTLALVIGTVLYLNLQLGAVFVITIPISYFGARFIMSKSQPYFKQQADALGTLNGFVQENLTGFNVIKLFGREGRSL
DDFKEITEDLQKVGFKANFISGLMMPFLNGLSDLTYLIVAVLGGLQVLAGRLTIGNMQAFVQYVWQINQPIQNLTQLTGQ
LQSAKSSLDRIFQLMNEPDEANDATEVLEGDLTGQVIFNHVDFQYVADKPLIRDFNLEVNPGEMVAIVGPTGAGKSTIIN
LLMRFYDVTAGSISVDGHDIRNLSRKDYRKQFGMVLQDAWLFEGTIKENLRFGNLEATDEEIVEAAKAANVDHFIRTLPG
GYNMEINQESSNISLGQKQLLTIARALLADPKILILDEATSSVDTRLELLIQKAMKTLMQGRTSFVIAHRLSTIQEADKI
LVLKDGQIIEQGNHESLLADKGFYYDLYNSQFAEK

Nucleotide


Download         Length: 1788 bp        

>NTDB_id=101077 T303_RS03810 WP_024704018.1 694363..696150(+) (rcrQ) [Streptococcus thermophilus ASCC 1275]
ATGAAGGATAATAAAAAGAAAACAACTCATTCCTCAAGTTTTGGCCGCCTTTGGTCATACTTGCAGGTTTATCGTTTCCC
ACTTTACTTAGCTATTTTCCTGAAAATTATTAGTGTCATCATGAGTGTTATTGAGCCGGTGGTCATTGGTTTAGCCATTA
CGGAACTGACTAAAAATACACTGGACATCATTAAGGGGGTAGCAGGTGCTCATATCAACGTGTCCTACGTTGGTTTAGTT
TTGGTCTTTTACCTCTTGCGTGGTCTCATCTATGAGTTGGCTTCTTACTATTCCAACTATTTTATGACCAATGCTGTGCA
AGCAACGGTTCAGGATATGCGAAATGAGATGATTGAGAAAATCAATCGTACCTCAGTGTCATACTTTGATAAGCAACAAT
TTGGAGACCTTTTGGGTCGCTTTACTAGTGACGTCGAGACAGTTTCAAATGCCTTGCAGCAGTCATTCTTGCAGGTTGTC
AACGCCATCTTTACTCTAGCCTTGGTTATTGGGACAGTGCTTTACCTTAATCTTCAGTTGGGAGCTGTGTTTGTTATCAC
TATTCCGATTTCTTACTTTGGTGCTCGCTTCATTATGAGTAAGTCTCAACCTTACTTTAAGCAGCAGGCTGATGCCCTAG
GTACTCTTAACGGTTTTGTTCAGGAAAATCTGACTGGTTTCAATGTGATTAAACTTTTTGGGCGTGAGGGTAGATCATTA
GACGACTTTAAAGAAATTACGGAAGACCTTCAAAAGGTAGGTTTTAAGGCCAATTTCATTTCAGGCCTCATGATGCCCTT
CCTTAATGGTTTATCTGACTTGACCTATCTAATTGTTGCCGTCCTAGGTGGTTTGCAAGTCTTGGCTGGTCGCTTGACGA
TTGGTAATATGCAGGCTTTCGTTCAGTACGTTTGGCAGATTAATCAACCTATTCAGAACTTGACTCAGCTGACTGGACAA
TTGCAGAGTGCTAAATCTTCCTTGGACCGTATTTTCCAACTGATGAATGAACCAGACGAGGCTAATGATGCTACTGAGGT
GCTTGAAGGAGATTTAACTGGTCAAGTTATCTTTAATCATGTGGACTTCCAGTATGTAGCTGATAAACCTTTGATTCGTG
ACTTTAATCTTGAGGTTAATCCTGGTGAAATGGTGGCTATTGTCGGTCCTACCGGTGCTGGAAAATCAACTATTATCAAT
CTTCTCATGCGTTTCTATGATGTTACTGCAGGTTCTATCTCGGTTGATGGTCATGATATACGCAACTTGTCGCGTAAAGA
TTATCGTAAACAGTTTGGTATGGTGCTTCAGGATGCTTGGCTCTTTGAAGGAACTATCAAGGAAAATCTTCGTTTTGGTA
ATCTTGAGGCAACTGATGAAGAAATTGTTGAAGCAGCGAAGGCTGCCAATGTGGATCACTTTATCCGTACGCTGCCTGGT
GGCTACAACATGGAAATAAACCAGGAATCAAGTAACATTTCACTGGGACAAAAGCAACTTTTGACCATAGCCCGTGCACT
TTTGGCTGACCCTAAAATCTTGATTTTGGACGAGGCAACCTCATCAGTTGATACCCGTCTGGAACTCTTGATTCAAAAAG
CCATGAAGACACTTATGCAAGGTCGAACAAGTTTTGTCATCGCTCACCGTTTATCAACAATCCAAGAAGCAGACAAGATT
TTGGTCCTTAAAGATGGACAAATCATCGAACAAGGGAACCATGAATCCCTCCTTGCAGATAAAGGTTTCTATTACGATTT
GTATAATAGTCAATTTGCAGAGAAATAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(373-521)

ABC transporter transmembrane region (ABC_membrane)

(29-310)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

42.689

100

0.427

Multiple sequence alignment