Detailed information NTG1010233

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: ABOA58_RS18780
• Genome accession: NZ_CP158190
• Coordinates: 3827206..3829611 (-)
• Length: 801 a.a.
• NCBI ID: WP_350299548.1
• Uniprot ID: -
• Organism: Peribacillus frigoritolerans strain LSJ146
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 3822206..3834611

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABOA58_RS18755 (ABOA58_18710)	-	3823664..3824740 (-)	1077	WP_350299544.1	AI-2E family transporter	-
ABOA58_RS18760 (ABOA58_18715)	-	3824968..3825183 (-)	216	WP_034311361.1	hypothetical protein	-
ABOA58_RS18765 (ABOA58_18720)	-	3825173..3825631 (-)	459	WP_350299545.1	PRC-barrel domain-containing protein	-
ABOA58_RS18770 (ABOA58_18725)	-	3825780..3826556 (-)	777	WP_350299546.1	TPM domain-containing protein	-
ABOA58_RS18775 (ABOA58_18730)	-	3826556..3827122 (-)	567	WP_350299547.1	LemA family protein	-
ABOA58_RS18780 (ABOA58_18735)	recD2	3827206..3829611 (-)	2406	WP_350299548.1	ATP-dependent RecD-like DNA helicase	Machinery gene
ABOA58_RS18785 (ABOA58_18740)	-	3829648..3830313 (-)	666	WP_137019033.1	tetratricopeptide repeat protein	-
ABOA58_RS18790 (ABOA58_18745)	mnmA	3830436..3831551 (-)	1116	WP_101222649.1	tRNA 2-thiouridine(34) synthase MnmA	-
ABOA58_RS18795 (ABOA58_18750)	-	3831581..3832726 (-)	1146	WP_350299549.1	cysteine desulfurase family protein	-
ABOA58_RS18800 (ABOA58_18755)	-	3832787..3833206 (-)	420	WP_034308657.1	Rrf2 family transcriptional regulator	-
ABOA58_RS18805 (ABOA58_18760)	-	3833529..3833846 (+)	318	WP_350299550.1	hypothetical protein	-

Sequence

Protein

• Length: 801 a.a.
• Molecular weight: 90226.89 Da
• Isoelectric Point: 4.7375

>NTDB_id=1010233 ABOA58_RS18780 WP_350299548.1 3827206..3829611(-) (recD2) [Peribacillus frigoritolerans strain LSJ146]
MSQQDSLDLFSEEKMFMKGSHLVTIFHNEENMYSVVRIRVHETNLNYEEKEAVVTGYFPRMHEDEIYIFYGAMKEHPRFG
LQFHVEHFRKDLPQSKEGIVSYLSGDLFKGIGKKTAESIVETLGEKAISKILAQPSLLDDIPKLSGEKAKGLYDTLVEHQ
GLEQVMIALNQYGFGPQLSMKIYQMYKQDTITMVQGNPYKLVEDIEGIGFGRADELGHQLGISGSHPDRIKAACLYTLES
QCLQDGNIYIEAEQLLEAVKRLLEENKRDRIEFTNISSEIIELTQEGKIVVEDQRIYPPSLFYSEKGIVMNIKRLLAQTE
YEDQFPESEFLLALGELEERLDVSYAPAQKEAIQTALQSPMLILTGGPGTGKTTVIKGIVELYAELHGVSMDINDYKKEG
SDPFPFVLAAPTGRAAKRMAESTGLPAVTIHRLLGWNGSEGFSHDEDNQLDGRIVIIDEVSMVDTWLAHQLFKALPENVQ
VILVGDEDQLPSVGPGQVLKDLLASNCVPTVSLEHIYRQADGSSIIELAHEIKKGRLPDDVTKQQEDRSFIRCQTGQIAQ
VIEKVVANARTKGFTAKDIQVLAPMYRGPAGIDALNKMLQEVFNSNADEKRREIKFGDVIYRTGDKVLQLVNQPEEGVFN
GDMGEIVSILFAKENTDSVDKVIISFEGIEVTYTKQDLNQITHAYCCSIHKSQGSEFPIVILPVVKSYYRMLRRNLLYTA
ITRSKNFLILCGEEDAFRLGIERNDEMSRKTTLREKLQGILSEEEMPAEKGEVSQQSSYLDILMHADPMIGMENVTPYDF
M

Nucleotide

• Length: 2406 bp

>NTDB_id=1010233 ABOA58_RS18780 WP_350299548.1 3827206..3829611(-) (recD2) [Peribacillus frigoritolerans strain LSJ146]
TTGAGCCAGCAAGATTCGTTGGATTTGTTTTCAGAAGAGAAAATGTTCATGAAAGGAAGTCATTTAGTGACGATCTTTCA
TAATGAAGAAAATATGTACTCGGTTGTAAGAATTCGTGTGCATGAAACGAATCTGAATTATGAAGAGAAGGAAGCGGTCG
TAACTGGTTATTTTCCAAGGATGCATGAGGATGAGATCTATATTTTTTATGGGGCCATGAAGGAACATCCGCGTTTTGGC
CTTCAATTTCATGTAGAGCATTTTCGCAAGGATCTGCCTCAATCCAAGGAAGGCATCGTCAGTTATTTATCAGGTGACCT
TTTCAAGGGCATTGGGAAGAAAACAGCAGAAAGCATTGTTGAGACACTGGGTGAAAAGGCAATTTCAAAAATTCTGGCTC
AGCCCTCGCTACTTGATGATATCCCGAAGCTATCCGGGGAAAAGGCAAAGGGCCTCTATGATACATTGGTCGAGCATCAA
GGTCTGGAGCAGGTGATGATCGCCCTGAATCAATATGGCTTCGGTCCGCAGCTGTCGATGAAGATTTATCAAATGTATAA
ACAGGATACGATCACGATGGTTCAGGGAAATCCGTATAAGCTCGTAGAGGATATTGAAGGGATTGGTTTTGGACGGGCGG
ATGAGCTTGGACATCAGCTGGGCATTTCCGGCAGCCATCCCGACCGAATCAAGGCTGCGTGCTTGTATACGCTTGAATCT
CAATGCCTGCAGGACGGAAATATCTACATAGAAGCTGAGCAGCTATTGGAAGCGGTCAAACGGCTGCTTGAGGAAAATAA
GCGGGACCGCATTGAGTTCACGAACATTTCCTCGGAAATAATCGAATTGACGCAAGAGGGGAAAATAGTTGTCGAGGATC
AACGAATTTATCCGCCTTCGCTTTTCTATTCGGAAAAGGGAATCGTGATGAACATCAAGCGGCTGCTTGCTCAAACCGAG
TATGAGGACCAGTTCCCCGAATCAGAGTTCTTGCTGGCACTTGGGGAGCTGGAAGAGCGGCTGGATGTTTCCTATGCCCC
GGCCCAAAAGGAAGCGATCCAAACGGCCCTGCAATCACCCATGTTAATCTTGACGGGCGGACCGGGTACGGGTAAGACGA
CAGTCATCAAAGGAATCGTTGAGCTATATGCAGAGCTGCATGGCGTTTCCATGGACATTAACGATTATAAAAAAGAAGGA
AGCGATCCATTTCCATTCGTACTTGCGGCTCCTACTGGCCGTGCAGCGAAACGCATGGCCGAATCGACTGGGCTTCCCGC
TGTTACGATCCATCGTTTGCTCGGGTGGAACGGGAGTGAAGGCTTTTCCCATGATGAGGATAATCAGCTGGATGGCCGTA
TCGTAATCATCGATGAGGTTTCAATGGTGGATACGTGGCTGGCCCATCAATTGTTTAAAGCTCTGCCGGAAAATGTCCAA
GTGATATTGGTTGGTGATGAAGATCAGCTGCCATCTGTTGGACCTGGGCAGGTTTTAAAGGATTTGCTTGCATCGAATTG
TGTCCCGACTGTCAGTCTTGAACATATTTATCGTCAAGCCGATGGCTCGTCGATCATTGAATTGGCACATGAAATCAAAA
AAGGAAGGCTTCCGGATGATGTCACGAAACAGCAAGAAGATCGATCGTTCATTCGCTGCCAAACCGGTCAAATCGCCCAA
GTTATCGAGAAAGTGGTTGCCAATGCCAGGACGAAAGGCTTCACGGCCAAGGATATACAGGTGCTGGCTCCCATGTATAG
AGGACCTGCCGGCATTGATGCATTGAATAAAATGCTTCAGGAAGTGTTCAATAGCAATGCGGATGAAAAGCGGCGGGAAA
TAAAATTCGGAGACGTAATATACAGAACGGGAGATAAGGTGCTTCAACTGGTGAACCAGCCAGAGGAGGGCGTCTTTAAT
GGCGATATGGGAGAAATCGTGTCGATATTGTTCGCTAAAGAAAATACCGATTCTGTCGATAAAGTAATCATATCGTTCGA
AGGCATCGAAGTGACATACACGAAGCAGGACTTGAACCAGATCACACATGCCTATTGCTGCTCCATCCATAAGTCGCAGG
GAAGTGAATTCCCCATTGTCATTTTACCTGTAGTGAAAAGCTATTATCGGATGCTCCGACGTAATTTATTGTATACGGCG
ATTACGCGCAGTAAAAATTTCTTGATCCTTTGTGGTGAAGAAGATGCATTCCGTTTAGGGATCGAGCGTAATGATGAGAT
GAGCCGCAAAACGACTTTGCGTGAAAAGCTGCAGGGGATTTTGAGTGAAGAAGAAATGCCGGCGGAAAAGGGAGAGGTAT
CTCAACAATCAAGTTATCTTGATATTCTCATGCATGCTGACCCGATGATCGGGATGGAGAATGTCACGCCTTATGATTTT
ATGTAG

Domains

Predicted by InterproScan.

• Helix-hairpin-helix containing domain (HHH_RecD2) (158-249)

• AAA domain (AAA_30) (345-555)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (595-666)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (683-731)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	62.547	100	0.625