Detailed information NTG0100995

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: P303_RS03070
• Genome accession: NZ_CP006740
• Coordinates: 670112..671473 (+)
• Length: 453 a.a.
• NCBI ID: WP_040123127.1
• Uniprot ID: -
• Organism: Xylella fastidiosa MUL0034
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 665112..676473

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
P303_RS03060 (P303_03280)	-	666861..668771 (+)	1911	WP_038229844.1	DUF3857 domain-containing transglutaminase family protein	-
P303_RS03065 (P303_03285)	lolA	669333..669959 (+)	627	WP_004089126.1	outer membrane lipoprotein chaperone LolA	-
P303_RS03070 (P303_03290)	rarA	670112..671473 (+)	1362	WP_040123127.1	replication-associated recombination protein A	Machinery gene
P303_RS03075 (P303_03295)	crcB	671634..672035 (+)	402	WP_038229848.1	fluoride efflux transporter CrcB	-
P303_RS03080 (P303_03300)	-	672709..674205 (+)	1497	WP_038229850.1	ATP-binding protein	-
P303_RS03085 (P303_03305)	folK	674330..674845 (+)	516	WP_038229884.1	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	-
P303_RS03090 (P303_03310)	-	674856..675593 (-)	738	WP_004083738.1	pteridine reductase	-

Sequence

Protein

• Length: 453 a.a.
• Molecular weight: 50601.87 Da
• Isoelectric Point: 7.1006

>NTDB_id=100995 P303_RS03070 WP_040123127.1 670112..671473(+) (rarA) [Xylella fastidiosa MUL0034]
MTRQRFPTLQHDLLGVAPLLQPLAERMRPRTLHEMVGQKRLIAPDRALHRAVASGHVHSMILWGPPGCGKTTLSLLLAHY
IDAEFRSVSAVLSGLPEVRQILAEAAQRFSEGRRTVLFVDEVHRFNKMQQDAFLPHIERGSIIFVGATTENPSFELNSAL
LSRCRVHVLEAVSSQDIVVALQRALQDTERGLGGQKIEVSQASLLEIAKAADGDVRRALTLLEIAAELAQDEQITADLLS
QVLADRSRRFDKRGEQFYDQISALHKSVRSSNPDAALYWLLRMLDGGCDPIYLARRLTRMAIEDIGLADPRAQSMALEAW
DIYERLGSPEGDLAFAQLVLYLASTAKSNAGYVAFNVAKEDIRQTGTQDVPLHLRNAPTRLMKSLGYGIEYQYDHDAENG
VALEQTCFPDALGERIYYQPVSRGLEIKLKEKLDWLRAARAQIQADKPQRPRA

Nucleotide

• Length: 1362 bp

>NTDB_id=100995 P303_RS03070 WP_040123127.1 670112..671473(+) (rarA) [Xylella fastidiosa MUL0034]
GTGACACGACAGCGCTTTCCGACTCTTCAGCATGATTTGCTTGGTGTGGCTCCTCTCTTGCAGCCACTGGCCGAGCGCAT
GCGTCCTCGTACTCTTCATGAGATGGTAGGACAGAAGCGCTTGATTGCCCCAGATCGTGCATTGCATCGTGCGGTTGCTT
CCGGGCATGTGCATTCCATGATTTTGTGGGGACCGCCAGGGTGCGGCAAGACGACATTGTCATTGCTGTTAGCGCATTAC
ATTGATGCAGAATTTCGGTCAGTCTCGGCTGTTCTTTCGGGGTTGCCGGAGGTGCGTCAGATCTTGGCTGAGGCTGCGCA
GCGTTTTTCTGAAGGACGCCGCACCGTCTTGTTCGTGGACGAAGTGCATCGTTTTAACAAGATGCAGCAGGATGCGTTTC
TGCCGCATATCGAGCGTGGTTCCATTATTTTCGTTGGTGCCACTACTGAGAATCCATCCTTCGAATTGAACTCGGCGTTA
CTGTCGCGTTGCCGTGTCCACGTGTTGGAGGCAGTGTCGTCACAGGATATTGTTGTGGCATTGCAGCGGGCGTTGCAGGA
TACGGAGCGGGGTTTGGGTGGGCAGAAGATTGAAGTGTCTCAAGCCTCTCTGTTGGAGATTGCCAAGGCTGCAGATGGTG
ACGTGCGTCGTGCGCTCACCTTGTTGGAGATTGCTGCTGAGCTTGCCCAGGATGAGCAGATAACCGCTGACTTGCTTTCG
CAAGTGCTTGCCGATCGTAGTCGGCGCTTCGACAAACGGGGGGAGCAGTTCTATGACCAGATTTCGGCCTTGCACAAGAG
TGTACGTAGTTCCAACCCGGATGCGGCATTGTATTGGTTGCTGCGTATGCTGGATGGTGGTTGTGATCCTATCTACTTGG
CCCGGCGCTTGACCCGCATGGCGATTGAGGATATCGGTTTGGCTGATCCGCGTGCACAGTCGATGGCTCTGGAGGCTTGG
GATATCTATGAGCGGTTGGGTAGCCCGGAGGGAGATCTGGCGTTCGCGCAGTTGGTGCTGTACTTGGCAAGTACAGCAAA
ATCGAATGCTGGCTATGTTGCGTTCAATGTGGCCAAGGAGGACATTCGCCAGACGGGTACTCAGGATGTTCCGCTACATC
TGCGCAATGCACCGACCAGACTCATGAAAAGTCTCGGTTACGGTATCGAGTATCAGTACGATCATGATGCTGAGAACGGT
GTTGCGCTGGAACAGACTTGTTTTCCCGATGCGCTGGGGGAGCGTATTTACTATCAACCGGTATCCCGCGGTCTGGAGAT
TAAGCTGAAGGAGAAGTTGGACTGGTTGCGTGCAGCACGTGCTCAGATTCAAGCGGATAAGCCGCAGCGGCCGCGTGCAT
AG

Domains

Predicted by InterProScan.

• MgsA AAA+ ATPase C terminal (MgsA_C) (271-436)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (27-146)

• AAA C-terminal domain (AAA_assoc_2) (194-269)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	39.48	93.377	0.369