Detailed information NTG1009943

Bioinformatically predicted

Overview

• Name: codY
• Type: Regulator
• Locus tag: H0514_RS02130
• Genome accession: NZ_LR822020
• Coordinates: 404719..405504 (+)
• Length: 261 a.a.
• NCBI ID: WP_179972215.1
• Uniprot ID: -
• Organism: Streptococcus thermophilus isolate STH_CIRM_956
• Function: repress the expression of comX (predicted from homology) Competence regulation

Genomic Context

Location: 399719..410504

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H0514_RS02110 (STHERMO_0474)	pflA	399996..400796 (+)	801	WP_179972217.1	pyruvate formate-lyase-activating protein	-
H0514_RS02115 (STHERMO_0476)	-	400865..401618 (+)	754	Protein_374	hypothetical protein	-
H0514_RS10550	-	401690..402259 (-)	570	Protein_375	IS30 family transposase	-
H0514_RS02120 (STHERMO_0479)	-	402439..402891 (-)	453	WP_002946987.1	universal stress protein	-
H0514_RS02125 (STHERMO_0480)	-	403246..404460 (+)	1215	WP_179972216.1	pyridoxal phosphate-dependent aminotransferase	-
H0514_RS02130 (STHERMO_0481)	codY	404719..405504 (+)	786	WP_179972215.1	GTP-sensing pleiotropic transcriptional regulator CodY	Regulator
H0514_RS02135 (STHERMO_0482)	-	405567..406124 (+)	558	WP_179972214.1	cysteine hydrolase family protein	-
H0514_RS02140 (STHERMO_0483)	-	406249..407097 (+)	849	WP_179973029.1	MetQ/NlpA family ABC transporter substrate-binding protein	-
H0514_RS02145 (STHERMO_0484)	msrA	407109..407618 (+)	510	WP_002951714.1	peptide-methionine (S)-S-oxide reductase MsrA	-
H0514_RS02150	-	407806..408819 (+)	1014	Protein_382	family 1 glycosylhydrolase	-
H0514_RS02155 (STHERMO_0489)	-	409183..409506 (+)	324	WP_232086281.1	glycosyltransferase	-
H0514_RS02160 (STHERMO_0490)	-	409431..409613 (+)	183	WP_232086282.1	glycosyltransferase	-
H0514_RS02165 (STHERMO_0491)	gatC	409754..410056 (+)	303	WP_002884769.1	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC	-

Sequence

Protein

• Length: 261 a.a.
• Molecular weight: 28928.00 Da
• Isoelectric Point: 4.4150

>NTDB_id=1009943 H0514_RS02130 WP_179972215.1 404719..405504(+) (codY) [Streptococcus thermophilus isolate STH_CIRM_956]
MANLLDKTRKITSILQRSVDNLEGDLPYNNMAAQLADIIDCNAAIVNGGGTLLGYAMKYKTNNDRVEEFFKAKQLPEEYI
RGISRVYDTQENIGIDSDLTIFPVESKDDFPDGLTTIAPIYGGGMRLGSFIIWRNDHDFVDDDLILVEIAATVVGLQLLN
LQTENLEETIRKQTAINMAINTLSYSEIKAVSAILNELDGLEGRLTASVIADRIGITRSVIVNALRKLESAGIIESRSLG
MKGTYLKVLNEGIYDKLKEYE

Nucleotide

• Length: 786 bp

>NTDB_id=1009943 H0514_RS02130 WP_179972215.1 404719..405504(+) (codY) [Streptococcus thermophilus isolate STH_CIRM_956]
ATGGCAAATTTGCTTGATAAAACACGCAAAATTACTTCTATCTTGCAACGCTCAGTAGATAATTTGGAAGGAGATCTTCC
ATATAACAACATGGCTGCTCAGTTGGCAGATATTATTGATTGTAATGCTGCTATCGTAAATGGTGGAGGTACTCTCCTTG
GTTATGCTATGAAATACAAAACCAACAATGACCGTGTGGAAGAGTTTTTTAAAGCGAAACAACTTCCAGAGGAATACATA
CGTGGTATCAGCCGTGTTTATGATACTCAAGAAAATATCGGTATTGACAGTGACTTGACCATCTTCCCAGTGGAATCAAA
AGATGATTTCCCTGACGGTTTGACTACAATTGCACCAATCTATGGTGGTGGTATGCGTCTTGGTTCTTTCATTATTTGGC
GTAACGACCATGATTTTGTGGACGACGACCTTATCTTGGTTGAGATTGCAGCTACAGTAGTTGGTTTGCAATTGTTGAAT
CTTCAAACAGAAAACTTGGAAGAAACGATTCGTAAACAAACAGCTATTAATATGGCTATTAATACCTTGTCTTACTCAGA
AATCAAGGCAGTTTCAGCTATCTTGAATGAGTTGGACGGTTTAGAAGGTCGTTTGACAGCCTCTGTTATCGCGGACCGTA
TCGGAATCACTCGTTCTGTTATTGTTAATGCTCTTCGTAAATTAGAATCAGCTGGTATTATTGAAAGTCGTTCTCTTGGT
ATGAAAGGTACTTACCTTAAAGTCCTTAACGAAGGTATCTACGATAAATTGAAAGAATACGAATAA

Domains

Predicted by InterProScan.

• CodY helix-turn-helix domain (HTH_CodY) (201-261)

• CodY GAF-like domain (CodY) (3-182)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
codY	Lactococcus lactis subsp. lactis strain DGCC12653	65.759	98.467	0.648
codY	Bacillus subtilis subsp. subtilis str. 168	53.441	94.636	0.506