Detailed information NTG1009685

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: ABNQ20_RS02120
• Genome accession: NZ_CP158051
• Coordinates: 455059..456207 (+)
• Length: 382 a.a.
• NCBI ID: WP_003110016.1
• Uniprot ID: A0A0H2ZL88
• Organism: Pseudomonas aeruginosa strain P1110
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 450059..461207

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABNQ20_RS02095 (ABNQ20_02090)	-	451210..451506 (-)	297	WP_031632852.1	DUF167 domain-containing protein	-
ABNQ20_RS02100 (ABNQ20_02095)	-	451503..452096 (-)	594	WP_003084544.1	YggT family protein	-
ABNQ20_RS02105 (ABNQ20_02100)	proC	452107..452928 (-)	822	WP_003084546.1	pyrroline-5-carboxylate reductase	-
ABNQ20_RS02110 (ABNQ20_02105)	-	452940..453632 (-)	693	WP_004365038.1	YggS family pyridoxal phosphate-dependent enzyme	-
ABNQ20_RS02115 (ABNQ20_02110)	pilT	453847..454881 (+)	1035	WP_003084552.1	type IV pilus twitching motility protein PilT	Machinery gene
ABNQ20_RS02120 (ABNQ20_02115)	pilU	455059..456207 (+)	1149	WP_003110016.1	type IV pilus ATPase PilU	Machinery gene
ABNQ20_RS02125 (ABNQ20_02120)	czcD	456215..457114 (-)	900	WP_004365039.1	CDF family zinc transporter CzcD	-
ABNQ20_RS02130 (ABNQ20_02125)	-	457269..457673 (+)	405	WP_003084560.1	NINE protein	-
ABNQ20_RS02135 (ABNQ20_02130)	-	457916..459289 (+)	1374	WP_004365040.1	pyridoxal-phosphate dependent enzyme	-
ABNQ20_RS02140 (ABNQ20_02135)	-	459286..460470 (+)	1185	WP_003110017.1	cystathionine gamma-synthase	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 42559.83 Da
• Isoelectric Point: 6.7792

>NTDB_id=1009685 ABNQ20_RS02120 WP_003110016.1 455059..456207(+) (pilU) [Pseudomonas aeruginosa strain P1110]
MEFEKLLRLMVEKGGSDLFITAGVPPSMKVNGRVMPVTKTPLSPEQTRETVLGVMNEQQRRDFAENHECNFAISARGIGR
FRVSAFYQRNLVGMVLRRIETNIPTLEELKLPEILKKLALTKRGLVIFVGATGTGKSTSLAAMIGYRNKNSTGHIISIED
PIEYIHQHQGCIVTQREVGLDTDSFEVALKNTLRQAPDVIMIGEVRSRETMDHAVAFAETGHLCLATLHANNANQALERI
IHFFPADRHGQVWMDLSLNLKAIVAQQLVPTPDGKGRRAVIEVLLNTPLAADLIRKGEVHELKPLMKRSTEQGMQTFDQA
LYQLYTQGEITYEDALAHADSANDLRLMIKLGSESDADHLSNLTQGLSLEITDDDPAGRRFR

Nucleotide

• Length: 1149 bp

>NTDB_id=1009685 ABNQ20_RS02120 WP_003110016.1 455059..456207(+) (pilU) [Pseudomonas aeruginosa strain P1110]
ATGGAATTCGAAAAGCTGCTGCGCCTGATGGTGGAAAAGGGCGGCTCCGACCTGTTCATCACCGCCGGCGTACCGCCGTC
GATGAAGGTCAACGGCCGGGTGATGCCGGTGACCAAGACGCCGCTGTCGCCGGAGCAGACCCGCGAGACCGTGCTAGGCG
TGATGAACGAGCAGCAGCGCCGCGATTTCGCCGAGAACCATGAGTGCAACTTCGCCATCAGCGCCCGCGGCATCGGCCGC
TTCCGGGTCAGTGCCTTCTACCAGCGCAACCTGGTGGGCATGGTATTGCGCCGGATCGAGACCAACATCCCGACCCTGGA
AGAGCTGAAGCTCCCGGAAATCCTCAAGAAGCTGGCGCTGACCAAGCGCGGCCTGGTGATCTTCGTCGGCGCCACCGGCA
CCGGCAAGTCCACCTCGCTGGCGGCGATGATCGGCTACCGCAACAAGAACTCCACCGGGCACATCATCTCCATCGAGGAC
CCGATCGAGTATATCCACCAGCACCAGGGCTGCATCGTCACCCAGCGCGAGGTGGGGCTGGACACCGACTCCTTCGAGGT
GGCGCTGAAGAACACCCTGCGCCAGGCGCCGGACGTGATCATGATCGGCGAGGTGCGCTCGCGGGAGACCATGGACCATG
CCGTGGCCTTCGCCGAGACCGGCCACCTGTGCCTGGCGACCCTGCACGCGAACAACGCCAACCAGGCGCTGGAGCGGATC
ATCCACTTCTTCCCGGCCGACCGTCATGGCCAGGTGTGGATGGACCTGTCGCTGAACCTCAAGGCCATCGTCGCCCAGCA
ACTGGTGCCGACCCCCGACGGCAAGGGGCGGCGGGCGGTGATCGAGGTGCTGCTGAACACCCCGCTGGCCGCCGACCTGA
TCCGCAAGGGCGAGGTGCACGAGCTGAAGCCGCTGATGAAGCGCTCCACCGAGCAGGGCATGCAGACCTTCGACCAGGCG
CTGTACCAGCTCTACACCCAGGGCGAGATCACCTACGAGGACGCCCTGGCCCACGCCGACTCGGCCAACGACCTGCGCCT
GATGATCAAGCTCGGTTCGGAAAGCGACGCCGACCACCTGTCGAACCTGACCCAGGGCCTGAGCCTGGAAATCACCGACG
ACGACCCTGCCGGCCGGCGCTTCCGCTGA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (111-270)

3D structure

• AlphaFold DB: A0A0H2ZL88

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Pseudomonas stutzeri DSM 10701	88.22	100	0.882
pilU	Acinetobacter baylyi ADP1	65.266	93.455	0.61
pilU	Vibrio cholerae strain A1552	60.286	91.623	0.552
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	43.068	88.743	0.382