Detailed information NTG1008829

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: ABNP43_RS12545
• Genome accession: NZ_CP157878
• Coordinates: 2415295..2417679 (-)
• Length: 794 a.a.
• NCBI ID: WP_349924932.1
• Uniprot ID: -
• Organism: Bacillus altitudinis strain SCu11
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2410295..2422679

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABNP43_RS12510 (ABNP43_12500)	-	2411200..2411928 (+)	729	WP_007501456.1	amino acid ABC transporter ATP-binding protein	-
ABNP43_RS12515 (ABNP43_12505)	-	2411943..2412752 (+)	810	WP_008342689.1	transporter substrate-binding domain-containing protein	-
ABNP43_RS12520 (ABNP43_12510)	-	2412833..2413486 (+)	654	WP_007501460.1	amino acid ABC transporter permease	-
ABNP43_RS12525 (ABNP43_12515)	-	2413502..2414152 (+)	651	WP_008342693.1	amino acid ABC transporter permease	-
ABNP43_RS12530 (ABNP43_12520)	-	2414191..2414322 (-)	132	WP_008342695.1	YrzQ family protein	-
ABNP43_RS12535 (ABNP43_12525)	-	2414343..2414534 (-)	192	WP_003216308.1	hypothetical protein	-
ABNP43_RS12540 (ABNP43_12530)	-	2414548..2415006 (-)	459	WP_008342703.1	PRC-barrel domain-containing protein	-
ABNP43_RS12545 (ABNP43_12535)	recD2	2415295..2417679 (-)	2385	WP_349924932.1	ATP-dependent RecD-like DNA helicase	Machinery gene
ABNP43_RS12550 (ABNP43_12540)	-	2417699..2418352 (-)	654	WP_008342707.1	tetratricopeptide repeat protein	-
ABNP43_RS12555 (ABNP43_12545)	mnmA	2418414..2419532 (-)	1119	WP_041506814.1	tRNA 2-thiouridine(34) synthase MnmA	-
ABNP43_RS12560 (ABNP43_12550)	-	2419627..2420769 (-)	1143	WP_057079261.1	cysteine desulfurase family protein	-
ABNP43_RS12565 (ABNP43_12555)	-	2420788..2421207 (-)	420	WP_008342713.1	Rrf2 family transcriptional regulator	-

Sequence

Protein

• Length: 794 a.a.
• Molecular weight: 88894.19 Da
• Isoelectric Point: 4.9407

>NTDB_id=1008829 ABNP43_RS12545 WP_349924932.1 2415295..2417679(-) (recD2) [Bacillus altitudinis strain SCu11]
MQEHPDQMKLEDEPFLKGTVQAVIFHNESNLYSVLKVKVIETSENLEEKTASVTGYFPALHEEETYTFYGNVTSHPKFGE
QFQATHFQKEVPTTKQGIIHYLSSDLFEGIGKKTAEEIVGKLGNQTLHQIMRDPSVLYDVPRLSKKKADKLAAALQEHQG
LEQIMISLNQYGFGPQLSMKIYQAYESETLQKIEENPYQLVKDVEGIGFIKADELGARTGISGNDPERIRAALLYTVETA
SLQDGHTYIQTKDLIVETRKLLNQTGNDYKVTEMDVANQIIALGEGKDMIIEDERCYHPSLFYAEQSVAKRIQKIVAQTE
YADQFPESEFLLALGELEERLGVQYAPTQKEAIQKALMSPMLLLTGGPGTGKTTVIKGIVELYSDLHGVSLDPGDYKKDE
AFPFVLAAPTGRAAKRMTESTGLPAVTIHRLLGWNGSEGFSHDEDQPIEGKLVIIDESSMLDIWLANHLFKAIPDNIQVI
MVGDEHQLPSVGPGQVLRDLLASQAIPAVTLTDIYRQADGSTIVELAHDMKNGVLPKDITARSKDRSFIQCSSDQMKEVI
EKVVSNAAQKGYSAKDIQVLAPMYKGKAGINELNKMLQQILNPKKPKGREIPFGDVVYRTGDKVLQLVNQPENNIFNGDI
GEIVSIFYAKENTEKEDMAVISFDGNEITFTKKDFHQFTHAYCCSIHKSQGSEFPIVVLPVVRSYYRMLRRNLLYTAITR
SKKFLILCGEESALEWGVKNNEDSLRQTSLTMRLTETEEVMDAELAALQKELPFSVHDANIGMEGITPFDFMQE

Nucleotide

• Length: 2385 bp

>NTDB_id=1008829 ABNP43_RS12545 WP_349924932.1 2415295..2417679(-) (recD2) [Bacillus altitudinis strain SCu11]
GTGCAGGAACATCCAGATCAAATGAAGCTTGAAGACGAACCGTTTTTAAAAGGGACGGTTCAAGCCGTTATTTTCCATAA
TGAAAGTAATTTATACTCGGTGTTAAAAGTAAAAGTCATTGAAACATCAGAGAATTTAGAGGAAAAAACAGCATCTGTCA
CAGGCTACTTCCCAGCGCTTCATGAGGAGGAAACCTACACCTTCTATGGCAATGTCACAAGTCATCCGAAGTTTGGCGAG
CAGTTTCAAGCCACTCATTTTCAAAAGGAAGTCCCTACAACAAAGCAAGGCATCATTCATTATCTCTCTAGTGACTTGTT
TGAAGGGATTGGGAAAAAGACGGCGGAAGAAATCGTCGGCAAGTTAGGCAATCAGACACTTCATCAAATTATGCGTGATC
CGTCTGTTTTGTATGACGTCCCGCGCCTGTCAAAAAAGAAGGCAGATAAGCTGGCTGCCGCACTTCAGGAGCATCAAGGG
CTTGAGCAAATCATGATCAGCCTGAATCAATATGGCTTTGGTCCTCAGCTTAGTATGAAGATTTACCAAGCGTACGAGAG
TGAAACGTTGCAGAAAATTGAAGAAAACCCTTATCAGCTCGTCAAAGACGTCGAGGGGATTGGATTTATTAAAGCAGATG
AACTAGGCGCTAGAACAGGGATATCTGGAAATGATCCAGAACGCATTCGTGCAGCCCTTTTGTATACCGTTGAGACAGCA
AGCCTGCAAGACGGTCATACGTACATACAAACGAAAGATCTGATCGTCGAAACCCGTAAACTACTGAATCAAACCGGCAA
TGACTACAAAGTGACTGAAATGGACGTTGCCAATCAGATTATTGCACTTGGTGAAGGGAAAGACATGATCATTGAAGATG
AGCGCTGTTATCATCCGTCGCTCTTTTATGCGGAGCAAAGTGTGGCAAAACGCATTCAAAAAATTGTCGCTCAAACGGAA
TATGCAGATCAATTTCCTGAATCAGAATTTCTGCTTGCACTCGGTGAACTGGAGGAACGGCTTGGTGTCCAGTATGCACC
AACCCAAAAAGAAGCCATTCAAAAGGCACTCATGTCTCCAATGCTGCTTTTAACAGGCGGACCGGGTACAGGGAAAACGA
CGGTCATTAAAGGGATTGTCGAGCTTTATAGCGATCTTCACGGCGTATCTCTTGACCCGGGTGATTATAAAAAAGATGAA
GCATTTCCGTTCGTGCTTGCCGCACCAACTGGACGTGCTGCGAAACGAATGACAGAATCCACTGGACTTCCTGCTGTGAC
CATTCACCGGCTGCTAGGCTGGAATGGATCAGAAGGCTTCTCACATGATGAAGACCAGCCGATTGAAGGGAAGCTTGTTA
TCATTGATGAATCGAGTATGCTGGATATTTGGCTGGCGAACCATTTGTTTAAGGCGATCCCAGATAATATTCAAGTCATT
ATGGTTGGAGACGAACATCAACTTCCATCTGTCGGACCTGGTCAAGTGTTAAGAGACCTGCTTGCGTCACAAGCTATACC
GGCAGTGACACTAACTGATATTTACCGGCAGGCAGACGGTTCAACAATTGTTGAGCTTGCGCATGATATGAAAAATGGTG
TTTTGCCAAAGGATATTACTGCACGCTCGAAGGATCGATCCTTTATTCAATGCTCTAGTGACCAAATGAAAGAAGTCATC
GAGAAAGTGGTCAGCAATGCTGCTCAAAAGGGGTATTCAGCAAAGGACATTCAAGTGCTCGCCCCGATGTATAAAGGAAA
AGCAGGCATTAATGAACTGAATAAAATGCTTCAGCAAATTTTGAATCCTAAAAAGCCAAAAGGAAGAGAAATTCCTTTTG
GTGATGTCGTCTACCGGACAGGTGATAAGGTACTTCAGCTTGTCAATCAGCCCGAGAATAACATTTTTAATGGAGATATT
GGCGAAATTGTCTCGATCTTTTATGCGAAAGAAAACACGGAAAAAGAAGATATGGCGGTCATCTCCTTTGATGGAAATGA
AATCACGTTTACGAAAAAAGATTTTCATCAATTTACACACGCTTATTGTTGCTCGATTCATAAATCCCAGGGCAGTGAAT
TCCCAATCGTGGTGCTGCCAGTCGTGAGAAGTTATTATCGAATGCTTCGAAGAAATTTGCTTTACACGGCCATTACACGA
AGTAAAAAGTTTTTAATTTTGTGCGGTGAGGAATCAGCATTAGAGTGGGGCGTAAAAAATAATGAAGACTCCCTCAGACA
AACGTCTTTAACCATGCGTCTTACTGAAACGGAAGAAGTCATGGACGCTGAGCTAGCAGCTCTCCAAAAAGAACTTCCTT
TCAGCGTACACGATGCCAATATTGGCATGGAGGGAATCACTCCGTTTGATTTTATGCAAGAGTAA

Domains

Predicted by InterproScan.

• AAA domain (AAA_30) (345-553)

• Helix-hairpin-helix containing domain (HHH_RecD2) (157-248)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (593-659)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (680-728)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	80	100	0.801