Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiE   Type   Regulator
Locus tag   GPW69_RS02450 Genome accession   NZ_LR738724
Coordinates   471849..472583 (+) Length   244 a.a.
NCBI ID   WP_002943067.1    Uniprot ID   A0A0H3MU26
Organism   Streptococcus suis isolate 9401240     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 466849..477583
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GPW69_RS02425 - 467350..467658 (-) 309 WP_002938710.1 DUF1827 family protein -
  GPW69_RS02430 - 467713..468174 (-) 462 WP_002938708.1 NUDIX hydrolase -
  GPW69_RS02435 clpE 468360..470588 (-) 2229 WP_015646546.1 ATP-dependent Clp protease ATP-binding subunit Regulator
  GPW69_RS02440 - 470811..471041 (+) 231 WP_002938704.1 DUF1797 family protein -
  GPW69_RS02445 - 471167..471856 (+) 690 WP_074391566.1 amino acid ABC transporter permease -
  GPW69_RS02450 amiE 471849..472583 (+) 735 WP_002943067.1 amino acid ABC transporter ATP-binding protein Regulator
  GPW69_RS02455 - 472817..473665 (+) 849 WP_074391565.1 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase -
  GPW69_RS02460 - 473908..476097 (+) 2190 WP_074391564.1 YSIRK-type signal peptide-containing protein -
  GPW69_RS02465 - 476259..476804 (+) 546 WP_074391563.1 hypothetical protein -

Sequence

Protein


Download         Length: 244 a.a.        Molecular weight: 26881.11 Da        Isoelectric Point: 4.7252

>NTDB_id=1007138 GPW69_RS02450 WP_002943067.1 471849..472583(+) (amiE) [Streptococcus suis isolate 9401240]
MSNAIISIKDLHKYFGKNEVLKGIDLDIQQGQVVVIIGPSGSGKSTFLRTMNLLEVPTKGTVTFEGVDITDKSNDIFKMR
EKMGMVFQQFNLFPNMTVLDNITLSPIKTKGIAKDEAEKKAKELLEKVGLPDKANAYPQSLSGGQQQRIAIARGLAMDPD
VLLFDEPTSALDPEMVGEVLAVMQDLAKSGMTMVIVTHEMGFAREVADRVIFMDGGVIVEDGTPEEVFEHTKEERTKDFL
SKVL

Nucleotide


Download         Length: 735 bp        

>NTDB_id=1007138 GPW69_RS02450 WP_002943067.1 471849..472583(+) (amiE) [Streptococcus suis isolate 9401240]
ATGTCTAATGCGATTATTTCTATCAAGGATTTACATAAGTACTTCGGAAAGAATGAGGTTCTAAAAGGAATTGATTTAGA
TATTCAACAAGGTCAGGTAGTCGTTATTATCGGTCCATCAGGGTCAGGGAAATCGACTTTCTTACGTACAATGAACCTCT
TAGAAGTACCGACCAAGGGAACTGTTACATTTGAAGGTGTTGATATTACTGACAAGTCAAATGATATTTTCAAGATGCGC
GAAAAGATGGGAATGGTTTTTCAACAGTTCAATCTTTTTCCGAATATGACGGTATTAGATAATATTACTTTATCACCTAT
TAAGACAAAGGGAATTGCAAAGGATGAGGCTGAGAAGAAGGCTAAGGAATTACTTGAAAAGGTAGGATTGCCAGATAAGG
CGAATGCCTATCCACAAAGCCTTTCAGGTGGTCAGCAACAGCGGATCGCTATTGCACGTGGTCTGGCCATGGACCCAGAT
GTCCTACTTTTTGATGAACCGACCTCTGCACTAGACCCTGAAATGGTTGGTGAAGTTCTTGCTGTTATGCAGGATTTGGC
TAAGTCAGGGATGACCATGGTTATCGTGACTCATGAGATGGGATTTGCGCGTGAGGTAGCTGACAGGGTTATCTTTATGG
ATGGTGGTGTCATCGTGGAGGATGGAACGCCTGAAGAAGTCTTTGAACATACCAAGGAAGAACGGACTAAGGATTTCTTG
TCTAAGGTCTTGTAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(21-169)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H3MU26

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiE Streptococcus salivarius strain HSISS4

34.496

100

0.365
  amiE Streptococcus thermophilus LMG 18311

34.496

100

0.365
  amiE Streptococcus thermophilus LMD-9

34.496

100

0.365

Multiple sequence alignment