Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutS/mutS2   Type   Machinery gene
Locus tag   GPW69_RS01125 Genome accession   NZ_LR738724
Coordinates   196938..199271 (+) Length   777 a.a.
NCBI ID   WP_074391366.1    Uniprot ID   -
Organism   Streptococcus suis isolate 9401240     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 191938..204271
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GPW69_RS01105 treP 192748..194742 (-) 1995 WP_074391362.1 PTS system trehalose-specific EIIBC component -
  GPW69_RS01110 treR 194976..195689 (+) 714 WP_074391363.1 trehalose operon repressor Regulator
  GPW69_RS01115 - 195742..196053 (+) 312 WP_074391364.1 hypothetical protein -
  GPW69_RS01120 - 196050..196598 (+) 549 WP_074391365.1 CvpA family protein -
  GPW69_RS01125 mutS/mutS2 196938..199271 (+) 2334 WP_074391366.1 endonuclease MutS2 Machinery gene
  GPW69_RS01130 - 199295..199948 (+) 654 WP_074391367.1 GNAT family N-acetyltransferase -
  GPW69_RS01135 - 200051..200428 (+) 378 WP_029694277.1 MerR family transcriptional regulator -
  GPW69_RS01140 - 200431..201285 (+) 855 WP_074391368.1 aldo/keto reductase -
  GPW69_RS01145 trxA 201661..201975 (+) 315 WP_012775426.1 thioredoxin -
  GPW69_RS10890 - 202076..202126 (-) 51 WP_353735889.1 hypothetical protein -
  GPW69_RS01150 - 202116..203645 (+) 1530 WP_074391369.1 AMP-binding protein -

Sequence

Protein


Download         Length: 777 a.a.        Molecular weight: 87579.29 Da        Isoelectric Point: 6.5244

>NTDB_id=1007127 GPW69_RS01125 WP_074391366.1 196938..199271(+) (mutS/mutS2) [Streptococcus suis isolate 9401240]
MNNKIIETLEFHKVRQKIEPYLLTEQGFEELRQLEPMVEVHRIQQAFDELTDIAQIFVENPYFSLAATSDIGPAMRRLEL
DTDLNIAELLAVKKVLEVSKSLLDFYGNLENVSLSQLDKLFEKIELFPHLQGSLQSINDAGFVEDFASEKLARIRRKIRE
AEDQVRQVMQDILKTKGDMLSDSILASRNGRNVLPVKNTYRNKIAGVVHDISASGSTVYIEPRAVVTLNEEISHLRAEER
HELNRILQELSDMLRPHSGVIRNNAWLIGHIDFVRAKHLFARDHQAVVPKLSEKQDIALLNVRHPLIAEPVPNDLYFGSQ
LTAIVITGPNTGGKTIMLKTLGLTHLMAQSGLPILADKGSRVAIFKEIFADIGDEQSIEQSLSTFSSHMTYTVQILAEAD
QDSLILFDELGAGTDPQEGASLAMAILDDLRLRGIKTMATTHYPELKAYGIETSGIENASMEFDSNSLRPTYKFMQGVPG
RSNAFEIARRLGLSDIIIQSAKSWTDTDSDVNRIIEKLESQTVESRQRLDKIRDVEQENYKMNRALRKLYDELNRERENE
LNKARLEAKEIVDMALAESEDILKNLHAAASLKPHQIIEAKAELKKLAPEVVDLSKNKVLKKAKIQREAKLGDDIIVTAY
GQRGTLTNQLKDGRWEAQVGLIKMTLAKDEFELVKAEKAEQPKKRQVHTVKRANVRGPKARLDLRGKRYEEAMMELDEFI
DQALLNNLAQVDIVHGIGTGVIREGVTKYLRRNKQVKEFGYAPQNAGGSGCTIVTFK

Nucleotide


Download         Length: 2334 bp        

>NTDB_id=1007127 GPW69_RS01125 WP_074391366.1 196938..199271(+) (mutS/mutS2) [Streptococcus suis isolate 9401240]
ATGAATAATAAAATTATTGAAACCCTTGAATTTCACAAGGTAAGACAAAAAATTGAGCCCTATCTCTTGACGGAACAGGG
CTTTGAAGAATTACGACAGTTGGAGCCCATGGTGGAAGTCCACCGTATCCAACAGGCCTTCGACGAGTTGACAGACATAG
CGCAGATTTTTGTGGAAAATCCCTATTTCAGTCTGGCTGCTACTAGCGACATCGGTCCAGCCATGCGTCGTTTGGAATTG
GATACAGACCTCAATATCGCTGAGCTATTAGCTGTTAAAAAGGTCTTGGAAGTTTCTAAATCTCTCTTGGATTTTTATGG
AAATCTGGAAAATGTCAGTCTTAGCCAGCTGGATAAACTCTTTGAGAAGATTGAGCTTTTTCCACATTTACAAGGCTCCC
TCCAGTCCATCAATGATGCTGGTTTTGTAGAGGATTTTGCCTCTGAAAAACTAGCCCGTATTCGAAGAAAAATCCGTGAA
GCTGAAGACCAAGTTCGTCAGGTCATGCAGGATATTTTGAAGACCAAGGGCGACATGCTGTCCGATAGTATTTTGGCAAG
TCGTAATGGGCGAAATGTCCTTCCTGTCAAAAATACCTATCGCAATAAGATTGCAGGGGTTGTCCATGACATTTCTGCTT
CTGGCTCGACTGTGTATATTGAACCGCGGGCAGTGGTGACCCTGAACGAGGAAATCAGTCACCTCCGTGCAGAAGAACGC
CACGAGCTCAACCGTATCTTGCAGGAATTGTCGGATATGCTCCGTCCGCATAGTGGCGTGATTCGTAACAATGCATGGCT
TATCGGACATATTGATTTCGTCCGTGCCAAGCATCTCTTTGCGCGTGATCATCAAGCAGTTGTACCCAAACTATCTGAGA
AGCAGGATATTGCCCTTCTTAACGTTCGCCATCCGCTCATTGCTGAGCCTGTACCAAATGACCTGTATTTTGGTAGTCAA
TTGACGGCTATTGTTATCACAGGTCCCAATACGGGTGGTAAGACCATTATGCTCAAGACCTTGGGATTAACGCACCTTAT
GGCTCAGTCTGGTTTGCCTATTTTGGCAGACAAGGGCAGTAGGGTAGCTATCTTCAAAGAAATTTTTGCGGATATTGGGG
ATGAACAGTCGATTGAGCAGAGTTTATCAACCTTCTCCAGTCACATGACCTACACGGTTCAGATTTTAGCAGAGGCGGAT
CAAGATTCCCTCATTCTATTTGACGAGTTGGGAGCTGGGACAGATCCGCAGGAGGGTGCGTCTTTGGCAATGGCTATTTT
GGATGACCTTCGTCTGCGGGGGATCAAGACCATGGCAACCACCCACTACCCTGAGCTCAAGGCTTATGGGATAGAAACCT
CTGGTATTGAAAATGCCAGCATGGAGTTTGATAGCAATAGCCTGCGTCCGACCTATAAGTTTATGCAGGGTGTTCCTGGT
CGCTCCAATGCCTTTGAAATTGCCCGCCGTCTTGGTCTATCTGATATTATTATCCAGTCAGCAAAATCTTGGACGGATAC
AGATAGCGATGTGAACCGCATTATCGAGAAATTGGAAAGTCAGACGGTTGAAAGTCGTCAGCGTCTGGATAAGATTCGTG
ATGTGGAGCAAGAAAATTACAAGATGAACCGAGCCCTTCGTAAGCTCTATGACGAGCTCAATCGTGAGCGGGAAAATGAG
CTCAACAAGGCACGTTTGGAGGCCAAGGAAATTGTAGATATGGCATTGGCAGAAAGCGAGGATATTCTCAAAAATCTTCA
TGCTGCAGCCAGTCTTAAGCCCCACCAGATTATCGAAGCCAAGGCAGAGTTGAAAAAGTTGGCACCTGAAGTGGTGGATT
TGTCTAAGAACAAAGTCTTGAAAAAAGCCAAAATTCAGCGGGAAGCCAAGTTGGGCGATGACATTATAGTTACAGCTTAT
GGACAACGTGGGACCTTGACCAATCAGCTTAAAGATGGACGTTGGGAAGCTCAGGTTGGTTTGATTAAGATGACCTTGGC
CAAAGATGAGTTTGAGTTAGTCAAGGCGGAAAAGGCAGAGCAGCCTAAGAAACGCCAGGTTCACACAGTCAAACGTGCCA
ATGTACGAGGACCAAAAGCCCGCTTAGATCTCCGTGGCAAACGCTACGAAGAGGCTATGATGGAGCTGGATGAATTTATC
GACCAAGCCCTTCTCAACAATTTAGCACAAGTCGACATTGTCCACGGTATTGGTACAGGGGTTATCCGAGAAGGGGTGAC
AAAGTACCTTCGCCGCAACAAGCAAGTCAAGGAGTTCGGCTACGCCCCACAAAATGCAGGTGGCTCAGGCTGTACTATTG
TGACGTTTAAATAG

Domains

Predicted by InterProScan.

Smr domain (Smr)

(702-777)

MutS2 and Smr-associated SH3 domain (MSSS)

(632-670)

MutS domain V (MutS_V)

(324-504)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutS/mutS2 Bacillus subtilis subsp. subtilis str. 168

39.773

100

0.405

Multiple sequence alignment