Detailed information NTG1006936

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: ABLB99_RS13990
• Genome accession: NZ_CP157447
• Coordinates: 2939715..2940833 (+)
• Length: 372 a.a.
• NCBI ID: WP_139887707.1
• Uniprot ID: -
• Organism: Acinetobacter nosocomialis strain XH1727
• Function: mediate the depolymerization of the type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2934715..2945833

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABLB99_RS13975 (ABLB99_13970)	-	2936881..2937723 (-)	843	WP_139887705.1	undecaprenyl-diphosphate phosphatase	-
ABLB99_RS13980 (ABLB99_13975)	-	2937831..2938523 (-)	693	WP_032010894.1	YggS family pyridoxal phosphate-dependent enzyme	-
ABLB99_RS13985 (ABLB99_13980)	pilT	2938650..2939687 (+)	1038	WP_006581387.1	type IV pilus twitching motility protein PilT	Machinery gene
ABLB99_RS13990 (ABLB99_13985)	pilU	2939715..2940833 (+)	1119	WP_139887707.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
ABLB99_RS13995 (ABLB99_13990)	fur	2940904..2941341 (-)	438	WP_002052029.1	ferric iron uptake transcriptional regulator	-
ABLB99_RS14000 (ABLB99_13995)	-	2941453..2941851 (+)	399	WP_001170994.1	outer membrane protein assembly factor BamE	-
ABLB99_RS14005 (ABLB99_14000)	-	2941907..2942230 (-)	324	WP_002052062.1	RnfH family protein	-
ABLB99_RS14010 (ABLB99_14005)	-	2942230..2943297 (-)	1068	WP_004710227.1	hypothetical protein	-
ABLB99_RS14015 (ABLB99_14010)	-	2943450..2943905 (-)	456	WP_000782976.1	bacteriohemerythrin	-
ABLB99_RS14020 (ABLB99_14015)	-	2944158..2945006 (-)	849	WP_139887709.1	class II glutamine amidotransferase	-

Sequence

Protein

• Length: 372 a.a.
• Molecular weight: 41966.15 Da
• Isoelectric Point: 6.6944

>NTDB_id=1006936 ABLB99_RS13990 WP_139887707.1 2939715..2940833(+) (pilU) [Acinetobacter nosocomialis strain XH1727]
MDFNDLLNLMVEKKSSDLFITDGVAPSMKINGQIVPISKNSLSGEVIGQLLHSIMSEKQRKEFAETRECNFAIMNRDKTA
RFRVSAFQQRDMPGMVLRRIETKIPSIDDLQLPSVLKDLSMTKRGIIIFVGATGTGKSTSLASMISHRNHNSKGHIITIE
DPIEFIHEHAGCIITQREVGIDTDSFEIALKNTLRQAPDVILIGEIRSREVMDYAIGFAETGHLVLATMHANNANQALDR
IIHFFESDRHSQLYMDLSLNLKAMIAQQLIPTPDGNSRRAAIEILINSPLISDYIRKGEIHEIKDLMKRSRELGMQTFDQ
ALFDLYKAGQITYKDALKHADSPNDLRLTIKLANEGPDQITDEKQHLTFDRQ

Nucleotide

• Length: 1119 bp

>NTDB_id=1006936 ABLB99_RS13990 WP_139887707.1 2939715..2940833(+) (pilU) [Acinetobacter nosocomialis strain XH1727]
ATGGATTTTAATGACTTGCTCAACCTGATGGTTGAAAAAAAATCATCCGATCTGTTTATTACAGATGGTGTTGCACCATC
AATGAAGATTAACGGGCAAATTGTTCCAATTTCAAAAAATAGTCTTTCAGGCGAAGTGATTGGACAGCTCTTACATTCCA
TCATGAGTGAAAAACAGCGTAAAGAATTTGCAGAAACTCGTGAATGTAACTTTGCCATTATGAACCGCGATAAAACGGCG
CGTTTTCGTGTCAGTGCTTTTCAGCAACGTGACATGCCGGGTATGGTACTACGTCGAATTGAAACGAAAATTCCTTCAAT
TGATGACTTACAGTTGCCGTCTGTGCTTAAAGATTTATCGATGACCAAACGCGGCATTATTATTTTCGTAGGTGCAACAG
GTACAGGTAAATCGACTTCATTGGCTTCAATGATCAGCCATCGTAACCATAACTCTAAAGGCCATATCATTACCATTGAG
GACCCGATTGAGTTTATTCACGAACATGCGGGCTGCATTATTACTCAACGTGAAGTCGGTATTGATACGGACTCATTCGA
AATTGCGTTAAAAAACACGTTACGACAAGCACCCGATGTCATCTTAATTGGTGAGATTCGTTCTCGTGAAGTCATGGACT
ACGCAATTGGCTTTGCTGAAACAGGTCACCTTGTATTAGCTACAATGCACGCCAACAACGCCAACCAAGCACTCGATCGT
ATTATTCACTTTTTTGAAAGTGACCGTCATAGCCAGCTTTACATGGACTTGTCTCTTAACTTAAAAGCCATGATTGCACA
GCAGCTTATTCCAACACCAGATGGTAATTCACGCCGTGCAGCGATTGAGATCTTAATTAACTCACCATTAATTTCAGACT
ATATCCGTAAAGGTGAAATTCATGAAATTAAGGACTTGATGAAACGCTCACGTGAGCTTGGTATGCAGACCTTTGACCAA
GCTTTATTCGACTTATATAAAGCGGGTCAAATTACTTATAAAGATGCGCTTAAACATGCCGACTCACCAAACGATTTACG
TTTAACGATTAAACTTGCAAATGAAGGTCCTGATCAAATAACAGACGAAAAACAGCATTTAACTTTTGATCGTCAGTAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (32-270)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Acinetobacter baylyi ADP1	75.132	100	0.763
pilU	Pseudomonas stutzeri DSM 10701	68.464	99.731	0.683
pilU	Vibrio cholerae strain A1552	53.514	99.462	0.532
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	42.254	95.43	0.403