Detailed information NTG1006841

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: ABLB98_RS07690
• Genome accession: NZ_CP157435
• Coordinates: 1602396..1603025 (-)
• Length: 209 a.a.
• NCBI ID: WP_348882561.1
• Uniprot ID: A0AB39KF15
• Organism: Acinetobacter sp. XH1639
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1597396..1608025

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABLB98_RS07660 (ABLB98_07655)	-	1597819..1598259 (-)	441	WP_005159930.1	SRPBCC family protein	-
ABLB98_RS07665 (ABLB98_07660)	tadA	1598326..1598850 (-)	525	WP_256415044.1	tRNA adenosine(34) deaminase TadA	-
ABLB98_RS07670 (ABLB98_07665)	-	1598856..1599980 (-)	1125	WP_348882563.1	enoyl-CoA hydratase/isomerase family protein	-
ABLB98_RS07675 (ABLB98_07670)	ung	1599977..1600690 (-)	714	WP_348882562.1	uracil-DNA glycosylase	-
ABLB98_RS07680 (ABLB98_07675)	-	1600736..1601332 (-)	597	WP_348882511.1	6-carboxytetrahydropterin synthase	-
ABLB98_RS07685 (ABLB98_07680)	gspK	1601443..1602399 (-)	957	WP_348882510.1	type II secretion system minor pseudopilin GspK	-
ABLB98_RS07690 (ABLB98_07685)	xcpW	1602396..1603025 (-)	630	WP_348882561.1	type II secretion system minor pseudopilin GspJ	Machinery gene
ABLB98_RS07695 (ABLB98_07690)	xcpV	1603025..1603411 (-)	387	WP_087545361.1	type II secretion system minor pseudopilin GspI	Machinery gene
ABLB98_RS07700 (ABLB98_07695)	-	1603398..1603949 (-)	552	WP_005159908.1	prepilin-type N-terminal cleavage/methylation domain-containing protein	-
ABLB98_RS07705 (ABLB98_07700)	-	1603958..1604569 (-)	612	WP_034601445.1	TetR/AcrR family transcriptional regulator	-
ABLB98_RS07710 (ABLB98_07705)	-	1604610..1605383 (-)	774	WP_348882509.1	TatD family hydrolase	-
ABLB98_RS07715 (ABLB98_07710)	-	1605400..1605744 (-)	345	WP_004662384.1	PilZ domain-containing protein	-
ABLB98_RS07720 (ABLB98_07715)	-	1606083..1607066 (-)	984	WP_348882508.1	DNA polymerase III subunit delta'	-
ABLB98_RS07725 (ABLB98_07720)	kdsB	1607069..1607830 (-)	762	WP_348882507.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 209 a.a.
• Molecular weight: 23864.62 Da
• Isoelectric Point: 9.0640

>NTDB_id=1006841 ABLB98_RS07690 WP_348882561.1 1602396..1603025(-) (xcpW) [Acinetobacter sp. XH1639]
MKIKKGFTLVELLVAIAIFAVLSMLGWKVFDYLLKVKDRNAEHETHLFALQDAYQQILRDSLQIIPLTANDGRQLQAALV
LNDRGFMFSKAGVSDPLKQGLSPYERIEYRYDSTQKKVYRLKYSNLNIPNRVQPISSTLLENVDQFKVIVMNPQELTQWP
ENIGDPNNINELKKLPLGIKIQLSVAGTDYEWIYSLLNANQLLGNNSPL

Nucleotide

• Length: 630 bp

>NTDB_id=1006841 ABLB98_RS07690 WP_348882561.1 1602396..1603025(-) (xcpW) [Acinetobacter sp. XH1639]
ATGAAAATTAAAAAGGGTTTTACCCTTGTTGAATTGCTGGTTGCAATTGCTATTTTTGCCGTACTTTCAATGCTTGGTTG
GAAAGTTTTTGATTATCTATTAAAAGTCAAAGATCGTAATGCAGAGCATGAAACACATTTATTTGCGTTACAAGATGCCT
ATCAGCAGATTCTAAGAGATAGTCTGCAAATTATTCCATTAACGGCAAATGATGGTCGACAATTACAAGCCGCTTTGGTG
CTAAATGATCGTGGTTTTATGTTTAGTAAAGCAGGAGTGTCCGATCCGTTGAAACAAGGTTTGTCACCTTATGAACGTAT
AGAATATCGCTACGATTCAACGCAAAAAAAAGTTTATCGACTCAAATATTCAAATCTAAATATTCCAAATCGAGTACAAC
CCATCTCAAGTACCTTATTAGAAAATGTAGATCAATTTAAAGTAATCGTGATGAATCCACAGGAACTGACACAATGGCCT
GAAAATATTGGTGATCCTAATAATATTAATGAGTTAAAAAAATTACCATTAGGCATAAAAATACAGCTTAGTGTTGCAGG
TACGGATTACGAGTGGATTTATAGTCTACTGAATGCAAATCAATTGTTAGGAAATAACTCACCACTATGA

Domains

Predicted by InterproScan.

• Type II secretion system (T2SS), protein J (T2SSJ) (59-188)

• Prokaryotic N-terminal methylation motif (N_methyl) (1-25)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	74.346	91.388	0.679