Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutS/mutS2   Type   Machinery gene
Locus tag   FQT45_RS09145 Genome accession   NZ_LR595858
Coordinates   1852630..1854963 (-) Length   777 a.a.
NCBI ID   WP_077322520.1    Uniprot ID   -
Organism   Streptococcus pseudoporcinus strain NCTC10228     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1847630..1859963
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FQT45_RS09115 (NCTC10228_01882) - 1847880..1848548 (+) 669 WP_077322518.1 DUF1129 domain-containing protein -
  FQT45_RS09120 (NCTC10228_01883) rpsR 1849085..1849324 (-) 240 WP_002983142.1 30S ribosomal protein S18 -
  FQT45_RS09125 (NCTC10228_01884) ssbA 1849466..1849957 (-) 492 WP_007892149.1 single-stranded DNA-binding protein Machinery gene
  FQT45_RS09130 (NCTC10228_01885) rpsF 1849981..1850271 (-) 291 WP_003084800.1 30S ribosomal protein S6 -
  FQT45_RS09135 (NCTC10228_01886) mutY 1850949..1852091 (+) 1143 WP_077322519.1 A/G-specific adenine glycosylase -
  FQT45_RS09140 (NCTC10228_01887) trxA 1852198..1852512 (-) 315 WP_007892545.1 thioredoxin -
  FQT45_RS09145 (NCTC10228_01888) mutS/mutS2 1852630..1854963 (-) 2334 WP_077322520.1 endonuclease MutS2 Machinery gene
  FQT45_RS09150 (NCTC10228_01889) - 1855033..1855578 (-) 546 WP_077322521.1 CvpA family protein -
  FQT45_RS09155 (NCTC10228_01890) - 1855581..1855889 (-) 309 WP_003084886.1 hypothetical protein -
  FQT45_RS09160 (NCTC10228_01891) rnhC 1856008..1856925 (+) 918 WP_077322552.1 ribonuclease HIII -
  FQT45_RS09165 (NCTC10228_01892) lepB 1856941..1857534 (+) 594 WP_077322522.1 signal peptidase I -

Sequence

Protein


Download         Length: 777 a.a.        Molecular weight: 87555.16 Da        Isoelectric Point: 6.6332

>NTDB_id=1006428 FQT45_RS09145 WP_077322520.1 1852630..1854963(-) (mutS/mutS2) [Streptococcus pseudoporcinus strain NCTC10228]
MNRKILEQLEFAKVKEQFQTYLQTDQAKIELQQLEPTTQISKLQDYITEVQEMSEIFLENHHFTIGSLRDLTEPIRRLEL
EADLNSQELLDIKRLLMISAEVSRFYQELENVDLVVLKRLFEKVETFPQLQGSLQAINDGGFIESFASPELATIRRKMTD
SENQVRQLLQDILKKYGDFLSESLIASRNGRSVLPVKNTYRHKVAGVVHDISASGNTVYIEPCALVQLNEEITQLHADER
HEITRILKSLSDMLRPHSRALTNNAWLIGHLDFVKAKYCYLRDYKASLPKISADKSIQLLNVRHPLLKNPVPNDLHFSRQ
LSVIVITGPNTGGKTIMLKTLGLAQIMGQSGLPILADQGSTIAVFNEIFADIGDEQSIEQSLSTFSSHMTNIVAILDEAN
QDSLVLFDELGAGTDPQEGASLAMAILEQLRLTEIKTMATTHYPELKAYGIETAFVENASMEFDSRSLKPTYHFMQGVPG
RSNAFEIARRLGLADPIVNQAEQMTDSDSDVNRIIEELEKQTLESRHRLDHIKEVEQDNLKFNRAVKKLYHEFAQAKDKE
IEKASLEAQEIVNLALAESEEILAKLHEASALKPHQIIEAKGQLKKLVPKTDLTKNRVLKKAKKLRQPQAGDDILVTAYG
QRGTLLKQVKGNKWEAQVGLIKMTLNEEEFQLVKVAEESQKPKKQTLNVIKRSTSSGPRARLDLRGKRYEEAMQELDAFI
DQALVNNMSQVDIIHGIGTGVIREAVTKYLRRHKHVKSFGYAPQNAGGSGCTIANLG

Nucleotide


Download         Length: 2334 bp        

>NTDB_id=1006428 FQT45_RS09145 WP_077322520.1 1852630..1854963(-) (mutS/mutS2) [Streptococcus pseudoporcinus strain NCTC10228]
ATGAATAGAAAAATTTTAGAACAATTAGAATTTGCCAAAGTTAAAGAGCAGTTCCAAACCTATCTGCAAACCGACCAGGC
CAAAATTGAATTACAACAATTAGAACCAACTACCCAAATTAGCAAGTTACAAGATTATATTACAGAAGTTCAAGAAATGT
CAGAAATTTTTCTTGAAAATCACCATTTCACGATTGGAAGTCTGCGTGACCTAACTGAGCCCATCCGTCGCCTAGAATTA
GAAGCTGACCTTAATAGTCAAGAGCTGCTAGATATTAAGCGACTCTTGATGATCTCAGCCGAGGTTAGTCGATTTTACCA
AGAGTTAGAAAATGTTGATTTAGTCGTGCTAAAGCGACTTTTTGAGAAAGTCGAGACTTTTCCTCAGTTGCAGGGTTCCT
TACAAGCTATTAATGATGGCGGATTTATCGAAAGCTTCGCTAGTCCAGAATTAGCAACTATCCGAAGAAAAATGACTGAC
AGCGAAAATCAAGTGCGCCAACTCTTACAAGACATCTTAAAAAAATATGGTGATTTTCTCTCTGAAAGTTTAATTGCTAG
TCGGAATGGTCGTAGTGTTTTACCGGTAAAAAATACCTATCGGCATAAAGTAGCTGGTGTTGTTCATGATATTTCAGCAT
CAGGTAACACGGTCTATATTGAGCCTTGTGCCCTAGTTCAGCTTAATGAAGAAATCACGCAGTTGCATGCGGATGAGCGT
CATGAAATCACTCGTATCCTAAAGTCTCTGTCAGATATGCTAAGACCACATAGTCGAGCATTAACGAATAATGCTTGGTT
GATTGGACATCTAGACTTTGTAAAAGCCAAATATTGTTATTTAAGAGATTATAAGGCTAGTTTACCCAAAATTTCTGCGG
ATAAGTCTATTCAACTCTTAAATGTTCGTCACCCATTACTTAAAAATCCAGTGCCTAATGATTTGCATTTCTCGCGCCAG
CTTTCGGTTATTGTCATAACTGGGCCAAACACGGGGGGTAAGACAATCATGCTAAAAACCTTAGGTTTAGCCCAAATCAT
GGGGCAGTCAGGGCTTCCGATTTTAGCTGATCAAGGGTCAACTATTGCTGTATTTAATGAGATTTTTGCAGATATTGGTG
ATGAGCAGTCTATTGAGCAGAGTTTGTCAACTTTCTCAAGCCATATGACCAATATTGTCGCTATTTTAGATGAGGCAAAT
CAAGACAGCTTAGTTCTTTTTGATGAACTTGGAGCGGGAACGGACCCACAAGAAGGGGCGAGTTTAGCGATGGCAATCTT
GGAGCAGTTGCGTTTAACTGAGATTAAGACAATGGCTACTACTCATTACCCAGAATTGAAAGCCTATGGCATTGAGACAG
CGTTTGTTGAGAATGCCAGTATGGAGTTTGACAGTCGCAGTCTCAAACCCACTTATCATTTTATGCAGGGTGTCCCTGGC
CGTTCAAATGCCTTTGAAATTGCTCGTCGCCTTGGCTTGGCTGATCCTATTGTTAATCAAGCAGAGCAGATGACGGATTC
AGATAGTGATGTTAATCGTATTATCGAAGAACTAGAGAAACAGACGCTTGAAAGTCGGCACCGTCTTGACCATATTAAAG
AAGTTGAGCAAGATAACCTTAAATTCAATCGGGCAGTCAAAAAGCTTTACCATGAGTTTGCCCAAGCTAAGGACAAAGAA
ATTGAGAAAGCTAGCTTGGAAGCGCAAGAAATTGTCAATCTGGCTTTGGCTGAGAGTGAAGAGATACTAGCAAAATTACA
TGAAGCGTCTGCATTAAAACCACATCAAATCATTGAAGCTAAAGGTCAGTTGAAAAAGTTGGTTCCTAAAACAGATTTAA
CCAAAAATAGGGTCTTGAAAAAAGCTAAAAAATTACGACAGCCACAGGCGGGTGACGATATATTAGTAACTGCTTATGGG
CAACGTGGAACACTTCTTAAGCAGGTAAAAGGGAATAAATGGGAAGCACAAGTTGGCTTGATTAAGATGACTTTAAATGA
AGAAGAATTTCAACTAGTTAAGGTTGCTGAGGAGAGTCAAAAACCGAAAAAACAAACTCTGAATGTCATTAAACGAAGCA
CTAGCAGTGGACCGCGTGCACGACTAGACTTGCGAGGTAAACGCTATGAGGAAGCTATGCAAGAACTAGATGCTTTTATC
GACCAAGCTCTTGTTAATAATATGAGTCAAGTAGATATTATTCACGGAATTGGGACAGGTGTCATCCGTGAAGCGGTAAC
CAAGTATCTACGTCGTCATAAACATGTCAAAAGTTTTGGTTATGCCCCTCAAAATGCAGGTGGTTCAGGCTGCACTATTG
CTAACTTGGGTTAA

Domains

Predicted by InterProScan.

MutS2 and Smr-associated SH3 domain (MSSS)

(630-669)

Smr domain (Smr)

(702-775)

MutS domain V (MutS_V)

(324-505)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutS/mutS2 Bacillus subtilis subsp. subtilis str. 168

40.482

100

0.411