Detailed information NTG1006178

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: ABG082_RS12315
• Genome accession: NZ_CP157353
• Coordinates: 2384107..2386491 (-)
• Length: 794 a.a.
• NCBI ID: WP_317327691.1
• Uniprot ID: -
• Organism: Bacillus sp. BS1807G30
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2379107..2391491

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABG082_RS12280 (ABG082_12280)	-	2380014..2380742 (+)	729	WP_007501456.1	amino acid ABC transporter ATP-binding protein	-
ABG082_RS12285 (ABG082_12285)	-	2380757..2381566 (+)	810	WP_348936140.1	transporter substrate-binding domain-containing protein	-
ABG082_RS12290 (ABG082_12290)	-	2381647..2382300 (+)	654	WP_007501460.1	amino acid ABC transporter permease	-
ABG082_RS12295 (ABG082_12295)	-	2382316..2382966 (+)	651	WP_017367699.1	amino acid ABC transporter permease	-
ABG082_RS12300 (ABG082_12300)	-	2383005..2383136 (-)	132	WP_008362324.1	YrzQ family protein	-
ABG082_RS12305 (ABG082_12305)	-	2383157..2383348 (-)	192	WP_003216308.1	hypothetical protein	-
ABG082_RS12310 (ABG082_12310)	-	2383362..2383820 (-)	459	WP_224558497.1	PRC-barrel domain-containing protein	-
ABG082_RS12315 (ABG082_12315)	recD2	2384107..2386491 (-)	2385	WP_317327691.1	ATP-dependent RecD-like DNA helicase	Machinery gene
ABG082_RS12320 (ABG082_12320)	-	2386511..2387164 (-)	654	WP_017367702.1	tetratricopeptide repeat protein	-
ABG082_RS12325 (ABG082_12325)	mnmA	2387226..2388344 (-)	1119	WP_008342709.1	tRNA 2-thiouridine(34) synthase MnmA	-
ABG082_RS12330 (ABG082_12330)	-	2388439..2389581 (-)	1143	WP_348936141.1	cysteine desulfurase family protein	-
ABG082_RS12335 (ABG082_12335)	-	2389600..2390019 (-)	420	WP_008342713.1	Rrf2 family transcriptional regulator	-
ABG082_RS12340 (ABG082_12340)	-	2390226..2391491 (+)	1266	WP_008342715.1	replication-associated recombination protein A	-

Sequence

Protein

• Length: 794 a.a.
• Molecular weight: 88961.32 Da
• Isoelectric Point: 5.0157

>NTDB_id=1006178 ABG082_RS12315 WP_317327691.1 2384107..2386491(-) (recD2) [Bacillus sp. BS1807G30]
MQEHPDQMKLEDEPFLKGTVQAVIFHNESNLYSVLKVKVIETSENLEEKTASVTGYFPALHEEETYTFYGKVTSHPKFGE
QFQATHFQKEVPTTKQGIIHYLSSDLFEGIGKKTAEEIVGKLGNQTLHQIMRDPSVLYDVPRLSKKKADKLAAALQEHQG
LEQIMISLNQYGFGPQLSMKIYQVYESETLQKIEENPYQLVKDVEGIGFIKADELGARTGISGNDPDRIRAALLYTVETA
SLQDGHTYIQTKDLIIETRKLLNQTGNDYKVTEMDVANQIIALGEGKDMIIEDDRCYHPSLFYAEQSVAKRIQKIVSQTE
YADQFPESEFLLALGELEERLGVQYAPTQKEAIQKALMSPMLLLTGGPGTGKTTVIKGIVELYSDLHGVSLDPGDYKKDE
AFPFVLAAPTGRAAKRMTESTGLPAVTIHRLLGWNGSEGFSHDEDQPIEGKLVIIDESSMLDIWLANHLFKAIPDHIQVI
MVGDEHQLPSVGPGQVLRDLLASQAIPAVTLTDIYRQADGSTIVELAHDMKNGVLPKDITARSKDRSFIQCSSDQMKEVI
EKVVSNAAQKGYSAKDIQVLAPMYKGKAGINELNKMLQQILNPKKPKGREIPFGDVVYRTGDKVLQLVNQPENNIFNGDI
GEIVSIFYAKENTEKEDMAVISFDGNEITFTKKDFHQFTHAYCCSIHKSQGSEFPIVVLPVVRSYYRMLRRNLLYTAITR
SKKFLILCGEESALEWGVKNNEDSLRQTSLTMRLTETEEVMDAELAALQKELPFSVHDANIGMEGITPFDFMQE

Nucleotide

• Length: 2385 bp

>NTDB_id=1006178 ABG082_RS12315 WP_317327691.1 2384107..2386491(-) (recD2) [Bacillus sp. BS1807G30]
GTGCAGGAACATCCAGATCAAATGAAGCTTGAAGACGAACCGTTTTTAAAAGGGACGGTTCAAGCCGTTATTTTCCATAA
CGAAAGTAATTTATACTCGGTGTTAAAAGTAAAAGTCATTGAAACATCAGAGAATTTAGAGGAAAAAACAGCATCTGTCA
CAGGGTACTTCCCAGCGCTTCATGAGGAGGAAACCTACACCTTCTATGGCAAGGTCACAAGTCATCCGAAGTTTGGTGAG
CAGTTTCAAGCCACTCATTTTCAAAAGGAAGTCCCTACAACAAAACAAGGCATTATTCATTATCTCTCTAGTGACTTGTT
TGAAGGGATTGGGAAAAAGACGGCGGAAGAAATCGTCGGCAAGTTAGGCAATCAGACGCTTCATCAAATTATGCGTGATC
CGTCTGTTTTGTATGACGTCCCGCGCCTGTCAAAAAAGAAGGCAGATAAGCTGGCTGCCGCACTTCAGGAGCATCAGGGG
CTTGAGCAAATCATGATCAGCCTGAATCAATATGGCTTTGGTCCTCAGCTTAGCATGAAGATTTACCAAGTGTACGAGAG
TGAAACGTTGCAGAAAATTGAAGAAAACCCTTATCAGCTCGTCAAAGACGTAGAGGGGATTGGATTTATTAAAGCAGATG
AACTCGGCGCTAGAACAGGGATATCTGGAAATGATCCAGACCGCATTCGTGCAGCCCTTTTGTATACCGTTGAGACAGCA
AGCCTGCAAGACGGTCATACGTACATACAAACGAAAGATCTGATCATTGAAACCCGTAAATTGCTGAATCAAACAGGCAA
TGACTACAAAGTGACTGAAATGGACGTTGCCAATCAGATCATTGCACTTGGTGAAGGGAAAGACATGATCATTGAAGATG
ATCGCTGTTATCATCCTTCGCTCTTTTATGCGGAACAAAGTGTTGCAAAACGCATTCAAAAAATTGTCTCTCAAACAGAA
TATGCAGATCAATTTCCTGAATCAGAATTTCTTCTCGCACTTGGTGAATTGGAGGAGCGGCTGGGTGTCCAGTATGCACC
GACCCAAAAAGAAGCCATTCAAAAGGCACTCATGTCCCCGATGCTGCTCTTAACAGGCGGGCCGGGTACAGGGAAAACGA
CGGTCATTAAAGGGATTGTCGAGCTTTACAGCGATCTTCACGGCGTATCTCTTGACCCGGGTGATTATAAAAAAGATGAA
GCATTTCCGTTCGTACTTGCCGCACCAACTGGACGTGCTGCGAAACGAATGACAGAATCCACTGGACTTCCTGCTGTGAC
CATTCACCGGCTGCTAGGCTGGAATGGATCAGAAGGCTTCTCACATGATGAAGACCAGCCGATTGAAGGAAAGCTTGTCA
TCATTGATGAATCGAGTATGCTGGATATTTGGCTGGCGAACCATTTGTTTAAGGCGATCCCAGATCATATTCAAGTCATT
ATGGTTGGAGACGAACATCAACTTCCATCTGTCGGACCTGGTCAAGTGTTAAGAGACCTGCTTGCGTCACAAGCTATACC
GGCAGTTACACTAACTGATATTTACCGGCAGGCAGACGGTTCAACAATTGTTGAGCTTGCGCATGATATGAAAAATGGTG
TTTTGCCAAAGGATATTACTGCACGCTCGAAGGATCGATCCTTTATTCAATGCTCTAGTGACCAAATGAAAGAAGTCATC
GAGAAAGTGGTCAGCAATGCTGCTCAAAAGGGTTATTCAGCAAAGGACATTCAAGTGCTTGCCCCGATGTATAAAGGAAA
AGCAGGCATTAATGAACTGAATAAAATGCTCCAGCAAATTTTGAATCCTAAAAAGCCAAAAGGAAGAGAAATTCCATTTG
GTGATGTCGTCTACCGGACAGGTGATAAGGTACTTCAGCTTGTCAATCAGCCCGAGAATAACATTTTTAATGGAGATATT
GGAGAAATTGTCTCGATCTTTTATGCGAAAGAAAACACGGAAAAAGAAGATATGGCGGTCATCTCCTTTGATGGAAACGA
AATCACGTTTACGAAAAAAGATTTTCATCAATTTACACACGCTTATTGTTGCTCGATTCATAAATCCCAGGGCAGTGAAT
TCCCAATCGTGGTGCTGCCAGTCGTGAGAAGTTATTATCGAATGCTTCGAAGAAATTTGCTTTACACTGCCATTACACGA
AGTAAAAAGTTTTTAATTTTGTGCGGTGAGGAATCAGCATTAGAGTGGGGCGTAAAAAATAATGAAGACTCCCTCAGACA
AACGTCTTTAACTATGCGTCTTACTGAAACGGAAGAAGTCATGGATGCTGAGCTAGCAGCCCTCCAAAAAGAACTTCCTT
TCAGCGTACACGATGCCAATATTGGCATGGAGGGAATCACTCCGTTTGATTTTATGCAAGAGTAA

Domains

Predicted by InterproScan.

• Helix-hairpin-helix containing domain (HHH_RecD2) (157-248)

• AAA domain (AAA_30) (345-553)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (593-659)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (680-728)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	80.252	100	0.804