Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutS/mutS2   Type   Machinery gene
Locus tag   FGL23_RS01300 Genome accession   NZ_LR594049
Coordinates   273498..275831 (+) Length   777 a.a.
NCBI ID   WP_061603503.1    Uniprot ID   -
Organism   Streptococcus gordonii strain NCTC10231     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 268498..280831
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGL23_RS01280 (NCTC10231_00251) lepB 270943..271545 (-) 603 WP_048777409.1 signal peptidase I -
  FGL23_RS01285 (NCTC10231_00252) rnhC 271549..272439 (-) 891 WP_061603502.1 ribonuclease HIII -
  FGL23_RS01290 (NCTC10231_00253) - 272589..272894 (+) 306 WP_008808274.1 hypothetical protein -
  FGL23_RS01295 (NCTC10231_00254) - 272894..273442 (+) 549 WP_061603673.1 CvpA family protein -
  FGL23_RS01300 (NCTC10231_00255) mutS/mutS2 273498..275831 (+) 2334 WP_061603503.1 endonuclease MutS2 Machinery gene
  FGL23_RS01305 (NCTC10231_00256) - 275842..276486 (+) 645 WP_061603504.1 GNAT family N-acetyltransferase -
  FGL23_RS01310 (NCTC10231_00257) - 276587..278005 (+) 1419 WP_061603505.1 C69 family dipeptidase -
  FGL23_RS01315 (NCTC10231_00258) trxA 278090..278404 (+) 315 WP_061594405.1 thioredoxin -
  FGL23_RS01320 (NCTC10231_00259) - 278565..279083 (-) 519 WP_045772750.1 DUF4865 family protein -
  FGL23_RS01325 (NCTC10231_00260) - 279192..279938 (+) 747 WP_061603506.1 LysR family transcriptional regulator -
  FGL23_RS01330 (NCTC10231_00261) - 280038..280445 (+) 408 WP_061603507.1 hypothetical protein -

Sequence

Protein


Download         Length: 777 a.a.        Molecular weight: 87537.13 Da        Isoelectric Point: 6.0129

>NTDB_id=1006045 FGL23_RS01300 WP_061603503.1 273498..275831(+) (mutS/mutS2) [Streptococcus gordonii strain NCTC10231]
MNTKILETLEFNKIKDLFQGFLQTEQGKLELQVLQPTTKKEAIERAFLEVADMEQILVEDPHFHLAATKDITAISKRLEL
DGDLNIEELLVLKKVLRVSHDLVTFYNDLENVRLQELNRVFENLVDFPAIQGSLLAVNDGGFIESFASEDLGRIRRKIQE
NESKVRDLLQEILKNKGDMLADQVIASRNGRNVLPVKNTYRNRIPGVVHDISASGTTIYIEPRAVVNLNEEISNYKADER
YELLRILQELSAMIRPHATEIANNAWIIGHLDLVMAKLAFMRERGAVVPALSETQAIQLLQVRHPLIENAVANDLHFGQD
LTEIVITGPNTGGKTIMLKTLGLAQIMAQSGLPILADKGSRVGIFSQIFADIGDEQSIEQSLSTFSSHMTNIVSILEQVD
SESLVLLDELGAGTDPQEGAALAIAILEDLRLRQIKTMATTHYPELKAYGIETDWVENASMEFDTDSLRPTYRFMQGVPG
RSNAFEIARRLGLSELIVSHAQEQTNTDSDVNRIIERLEEQTLESRKRLDNIREVEQENLKFNRALKKLYNEFNREKETE
LNKARLEAQEIVDLALSESESILKNLHAKSSLKPHEIIEAKSQLKKLAPETVDLSKNKVLKQAKKHRAPKVGDDILVTSY
GQRGTLVKQLKDGHWEAQVGLIKMTLEEQEFNLLKAEKEQQPKRKQVNVVKRANTAGPRARLDLRGKRYEEAMKELDEFI
DQALLNNMAQVDIIHGIGTGVIREGVTKYLRRNKHVKSFGYAPQNAGGSGATIVIFK

Nucleotide


Download         Length: 2334 bp        

>NTDB_id=1006045 FGL23_RS01300 WP_061603503.1 273498..275831(+) (mutS/mutS2) [Streptococcus gordonii strain NCTC10231]
ATGAATACAAAAATATTAGAAACCTTAGAATTTAATAAAATAAAAGACTTGTTCCAAGGCTTTTTGCAAACGGAGCAGGG
AAAGTTGGAATTACAAGTTTTACAGCCGACCACAAAAAAAGAGGCAATTGAGAGAGCCTTTTTAGAAGTTGCAGATATGG
AGCAGATTTTAGTAGAAGATCCGCATTTTCATTTGGCAGCAACCAAGGATATCACTGCTATTAGCAAGCGTTTGGAGCTT
GATGGTGATCTGAATATCGAGGAATTGCTTGTTTTAAAAAAGGTTTTGCGCGTTTCGCATGACTTGGTTACTTTTTATAA
TGATTTAGAAAATGTTCGACTTCAAGAATTGAACCGTGTTTTTGAAAATCTAGTCGATTTCCCTGCTATTCAAGGGAGTC
TGTTAGCTGTCAACGACGGGGGCTTTATTGAAAGTTTTGCCAGTGAGGATCTGGGGCGAATCCGTCGTAAGATCCAAGAG
AATGAAAGCAAGGTACGAGATCTTTTGCAAGAAATTCTCAAAAACAAGGGAGACATGCTGGCAGATCAAGTGATAGCCAG
CCGGAATGGCCGCAATGTGCTGCCGGTTAAAAACACCTATCGAAATCGGATTCCAGGAGTGGTGCATGACATTTCTGCCA
GTGGAACGACCATTTATATCGAGCCTAGGGCAGTGGTTAACCTCAATGAGGAAATTTCCAACTACAAGGCGGACGAGCGC
TACGAACTCTTGCGAATTTTGCAAGAACTATCTGCTATGATTCGCCCTCATGCAACTGAAATTGCCAACAATGCTTGGAT
TATCGGTCATCTTGACTTGGTGATGGCCAAATTGGCCTTTATGAGAGAACGAGGAGCAGTAGTGCCAGCCTTATCCGAGA
CACAAGCCATTCAGTTGCTACAGGTTCGTCATCCCCTGATTGAAAATGCAGTAGCTAATGACCTGCATTTCGGACAAGAC
TTGACAGAGATTGTCATTACTGGGCCAAATACCGGTGGTAAGACCATCATGTTGAAGACCTTGGGGCTAGCTCAGATCAT
GGCTCAGTCAGGTCTGCCGATTTTGGCGGACAAGGGGAGTCGCGTTGGGATTTTCAGTCAGATTTTTGCAGACATTGGGG
ATGAGCAGTCCATTGAGCAGAGCCTGTCGACTTTCTCCAGCCACATGACCAATATCGTCTCTATTTTAGAGCAGGTTGAT
AGCGAGAGTCTGGTTCTGCTGGATGAGCTGGGAGCTGGGACTGATCCTCAGGAGGGAGCGGCTCTGGCTATTGCTATCTT
GGAAGATTTGCGGCTAAGACAGATTAAAACCATGGCGACGACCCACTATCCTGAGCTCAAAGCCTATGGGATTGAGACGG
ACTGGGTGGAAAATGCCAGCATGGAATTTGATACTGATAGTTTGCGACCGACCTATCGCTTTATGCAGGGAGTGCCTGGT
CGTTCTAATGCCTTTGAAATCGCTCGCCGCTTAGGCTTGTCTGAACTTATCGTTAGCCATGCCCAAGAGCAGACCAACAC
AGACAGCGATGTCAATCGGATTATTGAGCGCCTGGAAGAGCAGACGCTGGAAAGTCGCAAGCGCTTGGATAATATCCGCG
AGGTGGAGCAGGAAAATCTCAAATTTAACCGAGCCCTCAAAAAACTTTACAATGAGTTTAACCGAGAAAAAGAAACCGAG
CTCAATAAGGCACGCTTGGAAGCTCAGGAAATCGTTGATTTGGCTCTATCAGAGAGTGAGAGCATTCTCAAAAATCTCCA
TGCTAAGTCCAGTCTCAAACCTCATGAGATTATCGAAGCCAAGTCTCAACTCAAAAAGTTGGCACCAGAAACGGTTGATT
TATCAAAGAATAAGGTGCTCAAGCAGGCTAAGAAACATCGGGCGCCCAAGGTGGGAGACGATATCCTAGTCACTAGCTAT
GGTCAGCGGGGAACCTTGGTCAAGCAGCTCAAGGACGGCCACTGGGAAGCTCAGGTAGGTCTCATCAAGATGACTCTAGA
GGAGCAGGAATTTAATCTTCTCAAGGCTGAAAAAGAGCAACAACCTAAGCGCAAGCAGGTCAATGTGGTCAAGCGAGCTA
ATACTGCTGGACCAAGAGCTAGACTGGATTTACGAGGTAAGCGTTACGAAGAAGCTATGAAAGAGCTAGATGAATTTATC
GATCAGGCCCTTCTTAATAATATGGCTCAGGTAGATATTATCCATGGTATCGGGACCGGGGTCATCCGTGAAGGAGTGAC
TAAATACCTCCGCCGCAACAAGCATGTCAAGTCCTTCGGCTATGCTCCACAAAATGCTGGGGGGAGCGGTGCAACGATTG
TGATCTTTAAGTAA

Domains

Predicted by InterProScan.

Smr domain (Smr)

(702-777)

MutS domain V (MutS_V)

(324-505)

MutS2 and Smr-associated SH3 domain (MSSS)

(631-668)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutS/mutS2 Bacillus subtilis subsp. subtilis str. 168

38.91

100

0.395

Multiple sequence alignment