Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   FGL21_RS09835 Genome accession   NZ_LR594047
Coordinates   1971358..1973067 (-) Length   569 a.a.
NCBI ID   WP_003053361.1    Uniprot ID   A0ABU0A4B9
Organism   Streptococcus dysgalactiae subsp. equisimilis strain NCTC11554     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1966358..1978067
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGL21_RS09815 (NCTC11554_02041) radA 1966690..1968051 (-) 1362 WP_037587114.1 DNA repair protein RadA Machinery gene
  FGL21_RS09820 (NCTC11554_02042) - 1968134..1968580 (-) 447 WP_003053378.1 dUTP diphosphatase -
  FGL21_RS09825 (NCTC11554_02043) - 1968688..1969455 (-) 768 WP_014612596.1 epoxyqueuosine reductase QueH -
  FGL21_RS09830 (NCTC11554_02044) - 1969574..1971358 (-) 1785 WP_003053374.1 ABC transporter ATP-binding protein -
  FGL21_RS09835 (NCTC11554_02045) rcrP 1971358..1973067 (-) 1710 WP_003053361.1 ABC transporter ATP-binding protein Regulator
  FGL21_RS09840 (NCTC11554_02046) rcrR 1973060..1973509 (-) 450 WP_003053369.1 MarR family transcriptional regulator Regulator
  FGL21_RS09845 (NCTC11554_02047) - 1973710..1974726 (+) 1017 WP_003053365.1 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase -
  FGL21_RS09850 (NCTC11554_02048) hasC 1974758..1975660 (+) 903 WP_003053363.1 UTP--glucose-1-phosphate uridylyltransferase HasC -
  FGL21_RS09855 (NCTC11554_02049) - 1975841..1976467 (+) 627 WP_003053353.1 DUF6198 family protein -
  FGL21_RS09860 (NCTC11554_02050) - 1976645..1977319 (-) 675 WP_003053389.1 rhomboid family intramembrane serine protease -
  FGL21_RS09865 (NCTC11554_02051) - 1977316..1977843 (-) 528 WP_012767579.1 5-formyltetrahydrofolate cyclo-ligase -

Sequence

Protein


Download         Length: 569 a.a.        Molecular weight: 63345.98 Da        Isoelectric Point: 5.6522

>NTDB_id=1005922 FGL21_RS09835 WP_003053361.1 1971358..1973067(-) (rcrP) [Streptococcus dysgalactiae subsp. equisimilis strain NCTC11554]
MLKEAILRYKWYALGSLIMIIGVVASSLLQPHYLKDVLSAVIQNNQDKIYNVGILLLIIALMGLIAGAVNTILAAKIAQG
VSADIREKTFRKIQSFSYANVEAFNAGNLVVRMTNDINQIQNLVMMLFQVLFRLPILFIGAFIMAVQTLPDLWWVIVLMV
ILIGLIMALVMSQMGPRFGKFQKLMDKINRIAKENLRGVRVVKSFVQEREQYAKFKETSNELLDLNLFIGYGFSLMQPAL
MLVSYLAVYVSIYMVSGMVETDPTVIGNIASFMTYMMQIMFSIIMVGFMGMQASRAFVSIGRLKEVLDTESTMTFDTEQE
EEVSGSIVFEDVSFTYPNDDEPTLRHISFRIEPGQMVGVVGATGAGKSTLAQLIPRLFDPQEGQILLGGKPIKSLSQATL
RQTVSIVLQKAILFSGTIADNLRQGSATADDYAMERAARIAQAKEFIDRMDDRYESQVEERGNNFSGGQKQRMSIARGVI
NQPKILVLDDSTSALDAKSERLVQEALNKELKETTTVIIAQKISSVVKADKILVLDQGQLIGEGTHAELVANNAIYREIY
ETQKGKEED

Nucleotide


Download         Length: 1710 bp        

>NTDB_id=1005922 FGL21_RS09835 WP_003053361.1 1971358..1973067(-) (rcrP) [Streptococcus dysgalactiae subsp. equisimilis strain NCTC11554]
ATGCTTAAAGAAGCGATTTTGCGTTACAAATGGTACGCATTGGGCTCGCTCATCATGATTATTGGGGTGGTAGCGAGCAG
TTTGCTTCAGCCTCATTATTTAAAAGATGTGCTGAGTGCTGTTATTCAAAATAACCAAGATAAGATTTACAATGTGGGGA
TATTGTTGCTTATCATTGCGCTGATGGGATTGATTGCAGGGGCAGTTAATACTATTTTAGCTGCTAAGATTGCTCAAGGG
GTCTCAGCGGATATTCGTGAGAAGACCTTCCGAAAAATTCAGAGTTTTTCTTATGCCAATGTAGAAGCTTTCAATGCTGG
GAACCTCGTGGTTCGGATGACCAATGATATTAATCAAATTCAAAATTTGGTAATGATGCTGTTTCAAGTGCTTTTTCGTC
TGCCGATTCTCTTTATTGGAGCTTTTATCATGGCGGTGCAGACCCTACCTGACTTGTGGTGGGTGATTGTGCTGATGGTT
ATTTTAATTGGTCTTATCATGGCTTTGGTCATGAGTCAGATGGGCCCACGTTTTGGGAAATTCCAAAAGTTGATGGACAA
GATCAATCGAATTGCTAAGGAAAATCTTCGTGGCGTGCGTGTGGTTAAATCTTTTGTGCAAGAACGGGAACAATATGCCA
AATTTAAAGAAACGTCCAATGAACTATTAGATTTGAATCTCTTTATCGGCTACGGTTTTTCGTTGATGCAACCTGCTTTA
ATGTTGGTATCTTATTTGGCAGTGTATGTGTCCATCTATATGGTTTCAGGCATGGTTGAAACAGATCCTACCGTTATTGG
GAATATTGCTTCTTTCATGACTTATATGATGCAAATCATGTTTTCAATTATCATGGTTGGCTTTATGGGCATGCAAGCAA
GTCGTGCCTTTGTCTCTATTGGTCGTCTCAAAGAGGTGCTAGATACTGAGTCAACCATGACCTTTGACACCGAGCAAGAA
GAAGAGGTTTCAGGTAGTATTGTCTTTGAGGATGTCAGCTTTACTTATCCTAATGATGATGAGCCGACCTTACGCCATAT
TTCCTTTAGGATTGAACCTGGTCAAATGGTTGGTGTTGTCGGTGCTACTGGTGCTGGGAAGTCTACACTGGCACAGCTTA
TTCCGCGCTTGTTTGACCCGCAAGAAGGTCAAATCTTGCTGGGAGGCAAACCGATTAAATCCTTGAGCCAAGCGACTCTT
CGTCAAACGGTTTCTATCGTGTTGCAAAAGGCTATTCTTTTTTCGGGAACCATTGCAGACAATCTCCGTCAAGGATCAGC
AACTGCAGATGATTATGCCATGGAACGAGCAGCGCGTATTGCTCAAGCCAAAGAATTTATCGATCGTATGGATGACCGCT
ATGAAAGCCAAGTGGAAGAACGGGGCAATAACTTCTCTGGTGGTCAAAAACAACGAATGTCGATTGCGCGTGGTGTTATT
AACCAACCTAAGATTCTTGTATTGGATGACTCAACATCGGCTCTGGATGCCAAGTCAGAAAGATTAGTTCAAGAAGCCTT
GAATAAAGAGTTGAAAGAGACCACCACAGTGATCATTGCCCAAAAAATTTCGTCAGTGGTAAAGGCTGATAAGATTTTAG
TTCTCGATCAGGGCCAACTGATTGGCGAAGGAACTCATGCTGAGTTGGTAGCTAATAATGCGATTTATCGTGAAATTTAT
GAGACCCAAAAAGGGAAGGAGGAAGACTAA

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(16-282)

ABC transporter (ABC_tran)

(344-493)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

34.915

100

0.362